abhishek_tiwari's pfs [36 articles] Export

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	Fingerprints - Screening and Similarity [My Copy] (2008) by Daylight posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Are protein-protein interfaces more conserved in sequence than the rest of the protein surface? [My Copy] Protein Sci, Vol. 13, No. 1. (2004), pp. 190-202. by D. R. Caffrey, S. Somaroo, J. D. Hughes, J. Mintseris, E. S. Huang posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	The variable and conserved interfaces of modeled olfactory receptor proteins [My Copy] Protein Sci, Vol. 8, No. 5. (1999), pp. 969-977. by Y. Pilpel, D. Lancet posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	The CLUSTALX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools [My Copy] Nucleic Acids Res, Vol. 25, No. 24. (1997), pp. 4876-4882. by J. D. Thompson, T. J. Gibson, F. Plewniak, F. Jeanmougin, D. G. Higgins posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Two amino acid substitutions convert a guanylyl cyclase, RetGC-1, into an adenylyl cyclase [My Copy] Proc Natl Acad Sci U S A, Vol. 95, No. 11. (1998), pp. 5993-5997. by C. L. Tucker, J. H. Hurley, T. R. Miller, J. B. Hurley posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Linking enzyme sequence to function using conserved property difference locator to identify and annotate positions likely to control specific functionality [My Copy] BMC Bioinformatics, Vol. 6, No. 1. (2005), 284. by K. Mayer, S. McCorkle, J. Shanklin posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Evolutionary conservation of RecA genes in relation to protein structure and function [My Copy] J Bacteriol, Vol. 178, No. 7. (1996), pp. 1881-1894. by S. Karlin, L. Brocchieri posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	The contrasting properties of conservation and correlated phylogeny in protein functional residue prediction [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by J. Manning, E. Jefferson, G. Barton posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	A new method for quantifying residue conservation and its applications to the protein folding nucleus. [My Copy] Biochem Biophys Res Commun, Vol. 351, No. 4. (2006), pp. 1031-1036. by X. Liu, J. Li, W. Guo, W. Wang posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Using a neural network and spatial clustering to predict the location of active sites in enzymes. [My Copy] J Mol Biol, Vol. 330, No. 4. (2003), pp. 719-734. by A. Gutteridge, G. J. Bartlett, J. M. Thornton posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Exploiting sequence and structure homologs to identify protein-protein binding sites. [My Copy] Proteins, Vol. 62, No. 3. (2006), pp. 630-640. by J. L. Chung, W. Wang, P. E. Bourne posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Prediction of catalytic residues using Support Vector Machine with selected protein sequence and structural properties [My Copy] BMC Bioinformatics, Vol. 7 (2006), 312. by N. V. Petrova, C. H. Wu posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Protein binding site prediction using an empirical scoring function. [My Copy] Nucleic Acids Res, Vol. 34, No. 13. (2006), pp. 3698-3707. by S. Liang, C. Zhang, S. Liu, Y. Zhou posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Sequence variation in ligand binding sites in proteins. [My Copy] BMC Bioinformatics, Vol. 6, No. 1. (2005) by T. J. Magliery, L. Regan posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Structure, function, and evolution of transient and obligate protein-protein interactions. [My Copy] Proc Natl Acad Sci U S A (2005) by J. Mintseris, Z. Weng posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	SDPpred: a tool for prediction of amino acid residues that determine differences in functional specificity of homologous proteins [My Copy] Nucleic Acids Res, Vol. 32, No. Web Server issue. (2004), pp. W424-8. by O. V. Kalinina, P. S. Novichkov, A. A. Mironov, M. S. Gelfand, A. B. Rakhmaninova posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Analysis and prediction of functional sub-types from protein sequence alignments [My Copy] J Mol Biol, Vol. 303, No. 1. (2000), pp. 61-76. by S. S. Hannenhalli, R. B. Russell posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Interaction Profiles of Protein Kinase-Inhibitor Complexes and Their Application to Virtual Screening [My Copy] J. Med. Chem., Vol. 48, No. 1. (2005), pp. 121-133. by C. Chuaqui, Z. Deng, J. Singh posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Similarity-based approaches to virtual screening. [My Copy] Biochem Soc Trans, Vol. 31, No. 3. (2003), pp. 603-606. by P. Willett posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Structural interaction fingerprint (SIFt): a novel method for analyzing three-dimensional protein-ligand binding interactions. [My Copy] J Med Chem, Vol. 47, No. 2. (2004), pp. 337-344. by Z. Deng, C. Chuaqui, J. Singh posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Elements of information theory [My Copy] Wiley series in telecommunications (1991) by T. M. Cover, J. A. Thomas posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Average core structures and variability measures for protein families: application to the immunoglobulins [My Copy] J Mol Biol, Vol. 251, No. 1. (1995), pp. 161-175. by M. Gerstein, R. B. Altman posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Prediction of protein secondary and active sites using the alignment of homologous sequences [My Copy] J Mol Biol, No. 195. (1987), pp. 957-961. by M. J. Zvelebil, G. J. Barton, W. R. Taylor, M. J. Sternberg posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	The classification of amino acid conservation [My Copy] J Theor Biol, No. 119. (1986), pp. 205-218. by W. Taylor posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Database of homology-derived protein structures and the structural meaning of sequence alignment [My Copy] Proteins, Vol. 9, No. 1. (1991), pp. 56-68. by C. Sander, R. Schneider posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Information theory analysis of the relationship between primary sequence structure and ligand recognition among a class of facilitated transporters [My Copy] J Theor Biol, Vol. 174, No. 2. (1995), pp. 179-188. by R. M. Williamson posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Universally conserved positions in protein folds: reading evolutionary signals about stability, folding kinetics and function [My Copy] J Mol Biol, Vol. 291, No. 1. (1999), pp. 177-196. by L. A. Mirny, E. I. Shakhnovich posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Biological Sequence Analysis: Probabilistic Models of Proteins and Nucleic Acids [My Copy] (1998) by R. Durbin, S. R. Eddy, K. Krogh, G. Mitchison posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Automatic methods for predicting functionally important residues [My Copy] J Mol Biol, Vol. 326, No. 4. (2003), pp. 1289-1302. by del Sol Mesa, F. Pazos, A. Valencia posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	Predicting functionally important residues from sequence conservation [My Copy] Bioinformatics, Vol. 23, No. 15. (2007), pp. 1875-1882. by J. A. Capra, M. Singh posted to pfs by abhishek_tiwari on 2009-09-18 12:54:34 as
	ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures [My Copy] Nucleic Acids Res, Vol. 33, No. Web Server issue. (2005), pp. W299-302. by M. Landau, I. Mayrose, Y. Rosenberg, et al.F. Glaser, E. Martz, T. Pupko, N. Ben Tal posted to pfs by abhishek_tiwari on 2009-09-18 12:54:33 as
	Information-theoretical entropy as a measure of sequence variability [My Copy] Proteins, Vol. 11, No. 4. (1991), pp. 297-313. by P. S. Shenkin, B. Erman, L. D. Mastrandrea posted to pfs by abhishek_tiwari on 2009-09-18 12:54:33 as
	AL2CO: calculation of positional conservation in a protein sequence alignment [My Copy] Bioinformatics, Vol. 17, No. 8. (2001), pp. 700-712. by J. Pei, N. V. Grishin posted to pfs by abhishek_tiwari on 2009-09-18 12:54:33 as
	Protein-protein interfaces: analysis of amino acid conservation in homodimers [My Copy] Proteins, Vol. 42, No. 1. (2001), pp. 108-124. by W. S. Valdar, J. M. Thornton posted to pfs by abhishek_tiwari on 2009-09-18 12:54:33 as
	Scoring residue conservation [My Copy] Proteins, Vol. 48, No. 2. (2002), pp. 227-241. by W. S. Valdar posted to pfs by abhishek_tiwari on 2009-09-18 12:54:33 as
	Incorporating background frequency improves entropy-based residue conservation measures [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (2006) by K. Wang, R. Samudrala posted to pfs by abhishek_tiwari on 2009-09-18 12:54:33 as

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sysbio	156
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ontologies	40
pfs	36
imaging	35
network-biology	29
data-integration	28
single-cell	28
bioinformatics	26
curation	26
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semantic-data-integration	23
systems-biology	20
robustness	18
flow-cytometry	18
review-articles	18
metabolomics	18
data-standards	17
databases	17
stress	12
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modelling	11
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xml	10
glucocorticoid	9
methodologies	9
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fluorescence	9
time-series-analysis	8
owl	8
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redundancy	7
steroidogenesis	7
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standards	6
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gpcr	6
philosophical	6
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hormone-assays	5
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complexity	5
network-inference	5
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obo	4
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mineralocorticoid	3
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ldl	3
cell-sorting	3
transcriptomics	3
ontology-alignment	3
clock	3
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web-2	3
model-annotation	3
semantics	3
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concept-rewriting	3
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abhishek_tiwari's pfs [36 articles] Export

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