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Structure-aided optimization of kinase inhibitors derived from alsterpaullone.by: C. Kunick, Z. Zeng, R. Gussio, D. Zaharevitz, M. Leost, F. Totzke, C. Schächtele, M. H. Kubbutat, L. Meijer, T. Lemcke
Chembiochem : a European journal of chemical biology, Vol. 6, No. 3. (March 2005), pp. 541-549.
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AbstractIn order to perform computer-aided design of novel alsterpaullone derivatives, the vicinity of the entrance to the ATP-binding site was scanned for areas that could be useful as anchoring points for additional protein-ligand interactions. Based on the alignment of alsterpaullone in a CDK1/cyclin B homology model, substituents were attached to the 2-position of the parent scaffold to enable contacts within the identified areas. Synthesis of the designed structures revealed three derivatives (3-5) with kinase-inhibitory activity similar to alsterpaullone. The novel 2-cyanoethylalsterpaullone (7) proved to be the most potent paullone described so far, exhibiting inhibitory concentrations for CDK1/ cyclin B and GSK-3beta in the picomolar range.
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