ajeffs's library 49 articles Export

	Germline mutations in WTX cause a sclerosing skeletal dysplasia but do not predispose to tumorigenesis [My Copy] Nature Genetics, Vol. 41, No. 1. (14 December 2008), pp. 95-100. by Zandra A. Jenkins, Margriet van Kogelenberg, Tim Morgan, et al.Aaron Jeffs, Ryuji Fukuzawa, Esther Pearl, Christina Thaller, Anne V. Hing, Mary E. Porteous, Sixto Garcia-Miñaur, Axel Bohring, Didier Lacombe, Fiona Stewart, Torunn Fiskerstrand, Laurence Bindoff, Siren Berland, Lesley C. Ad￨s, Michel Tchan, Albert David, Louise C. Wilson, Raoul C. M. Hennekam, Dian Donnai, Sahar Mansour, Valérie Cormier-Daire, Stephen P. Robertson posted to no-tag by ajeffs on 2009-03-20 02:27:39 as
	Pre-processing Agilent microarray data [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007) by Marianna Zahurak, Giovanni Parmigiani, Wayne Yu, et al.Robert Scharpf, David Berman, Edward Schaeffer, Shabana Shabbeer, Leslie Cope posted to agilent microarray preprocessing by ajeffs on 2008-10-20 10:15:03 as along with 7 people lwaldron coela nuin jfr jhatrimatri shigepong bertelsen
	Melanocytes in Development, Regeneration, and Cancer. [My Copy] Cell stem cell, Vol. 3, No. 3. (11 September 2008), pp. 242-252. by Richard Mark M. White, Leonard I I. Zon posted to cancer cell melanocyte stem by ajeffs on 2008-09-15 22:08:11 as
	Cutaneous melanoma: fishing with chips. [My Copy] Current molecular medicine, Vol. 8, No. 3. (May 2008), pp. 235-243. by S. Nambiar, A. Mirmohammadsadegh, U. R. Hengge posted to melanoma microarray review by ajeffs on 2008-05-15 01:19:22 as
	Invadopodia: At the cutting edge of tumour invasion [My Copy] Journal of Clinical Neuroscience, Vol. In Press, Corrected Proof by Stanley S. Stylli, Andrew H. Kaye, Peter Lock posted to cancer invadopodia by ajeffs on 2008-05-14 06:05:00 as along with 1 person joce
	The gene expression profiles of primary and metastatic melanoma yields a transition point of tumor progression and metastasis [My Copy] BMC Medical Genomics, Vol. 1, No. 1. (2008) by Adam Riker, Steven Enkemann, Oystein Fodstad, et al.Suhu Liu, Suping Ren, Christopher Morris, Yaguang Xi, Paul Howell, Brandon Metge, Rajeev Samant, Lalita Shevde, Wenbin Li, Steven Eschrich, Adil Daud, Jingfang Ju, Jaime Matta posted to melanoma microarray by ajeffs on 2008-05-01 02:34:34 as
	MicroRNA-137 targets microphthalmia-associated transcription factor in melanoma cell lines. [My Copy] Cancer research, Vol. 68, No. 5. (1 March 2008), pp. 1362-1368. by L. T. Bemis, R. Chen, C. M. Amato, et al.E. H. Classen, S. E. Robinson, D. G. Coffey, P. F. Erickson, Y. G. Shellman, W. A. Robinson posted to melanoma microrna mitf by ajeffs on 2008-03-14 03:32:46 as along with 4 people and 1 group daforerog tonamswish valeriehilgers bootsy microRNA
	Suppression subtractive hybridization profiles of radial growth phase and metastatic melanoma cell lines reveal novel potential targets [My Copy] BMC Cancer, Vol. 8 (22 January 2008), 19. by Josane F. Sousa, Enilza M. Espreafico posted to geneexpression melanoma by ajeffs on 2008-03-12 21:24:52 as along with 1 person renatomilani
	CD200 is induced by ERK and is a potential therapeutic target in melanoma. [My Copy] J Clin Invest, Vol. 117, No. 12. (December 2007), pp. 3922-3929. by K. B. Petermann, G. I. Rozenberg, D. Zedek, et al.P. Groben, K. McKinnon, C. Buehler, W. Y. Kim, J. M. Shields, S. Penland, J. E. Bear, N. E. Thomas, J. S. Serody, N. E. Sharpless posted to braf mapk melanoma microarray by ajeffs on 2008-03-04 20:44:18 as
	The MAPK pathway in melanoma. [My Copy] Curr Opin Oncol, Vol. 20, No. 2. (March 2008), pp. 183-189. by L. A. Fecher, R. K. Amaravadi, K. T. Flaherty posted to mapk melanoma by ajeffs on 2008-03-01 02:23:55 as
	Comprehensive expression profiling of tumor cell lines identifies molecular signatures of melanoma progression. [My Copy] PLoS ONE, Vol. 2, No. 7. (2007) by B. Ryu, D. S. Kim, A. M. Deluca, R. M. Alani posted to melanoma microarray pax3 by ajeffs on 2008-02-11 00:42:16 as
	DNA microarray analyses of melanoma gene expression: a decade in the mines [My Copy] Pigment Cell Research, Vol. 20, No. 6. (December 2007), pp. 466-484. by Hoek, S. Keith posted to melanoma microarray by ajeffs on 2008-02-11 00:41:24 as
	In vivo switching of human melanoma cells between proliferative and invasive states. [My Copy] Cancer Res, Vol. 68, No. 3. (1 February 2008), pp. 650-656. by K. S. Hoek, O. M. Eichhoff, N. C. Schlegel, et al.U. Döbbeling, N. Kobert, L. Schaerer, S. Hemmi, R. Dummer posted to cancer melanoma microarray phenotype-switch by ajeffs on 2008-02-07 23:33:25 as
	Modeling genomic diversity and tumor dependency in malignant melanoma. [My Copy] Cancer Res, Vol. 68, No. 3. (1 February 2008), pp. 664-673. by W. M. Lin, A. C. Baker, R. Beroukhim, et al.W. Winckler, W. Feng, J. M. Marmion, E. Laine, H. Greulich, H. Tseng, C. Gates, F. S. Hodi, G. Dranoff, W. R. Sellers, R. K. Thomas, M. Meyerson, T. R. Golub, R. Dummer, M. Herlyn, G. Getz, L. A. Garraway posted to cgh melanoma microarray by ajeffs on 2008-02-07 23:30:57 as
	Induction of apoptosis in rhabdomyosarcoma cells through down-regulation of PAX proteins. [My Copy] Proc Natl Acad Sci U S A, Vol. 93, No. 23. (12 November 1996), pp. 13164-13169. by M. Bernasconi, A. Remppis, W. J. Fredericks, F. J. Rauscher, B. W. Schäfer posted to antisense pax3 rhabdomyosarcoma by ajeffs on 2007-03-26 11:45:13 as
	PAX3 is expressed in human melanomas and contributes to tumor cell survival. [My Copy] Cancer Res, Vol. 61, No. 3. (1 February 2001), pp. 823-826. by F. A. Scholl, J. Kamarashev, O. V. Murmann, R. Geertsen, R. Dummer, B. W. Schäfer posted to melanoma pax3 by ajeffs on 2007-03-26 11:26:03 as
	Differences in global gene expression in melanoma cell lines with and without homozygous deletion of the CDKN2A locus genes. [My Copy] Melanoma Res, Vol. 16, No. 4. (August 2006), pp. 297-307. by S. Bloethner, K. Hemminki, R. K. Thirumaran, et al.B. Chen, J. Mueller-Berghaus, S. Ugurel, D. Schadendorf, R. Kumar posted to cdkn2a melanoma microarray by ajeffs on 2006-07-27 04:13:00 as
	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature [My Copy] Pigment Cell Research, Vol. 19, No. 4. (August 2006), pp. 290-302. by Hoek, S. Keith, Schlegel, et al.C. Natalie, Brafford, Patricia, Sucker, Antje, Ugurel, Selma, Kumar, Rajiv, Weber, L. Barbara, Nathanson, L. Katherine, Phillips, J. David, Herlyn, Meenhard, Schadendorf, Dirk, Dummer, Reinhard posted to melanoma microarray by ajeffs on 2006-07-27 04:07:15 as
	Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise. [My Copy] Nature, Vol. 441, No. 7095. (15 June 2006), pp. 840-846. by John R. Newman, Sina Ghaemmaghami, Jan Ihmels, et al.David K. Breslow, Matthew Noble, Joseph L. DeRisi, Jonathan S. Weissman posted to profiling proteomics by ajeffs on 2006-06-22 02:15:39 as along with 14 people and 3 groups yyfwuhan pkm bpcusack ogishima nzm jfr emilyhare nirfriedman madhadron cmm balabu pau margaritis dylanwalker EisenLab FAB-lab RNAtransport
	Gene profiling of polycystic kidneys. [My Copy] Nephrol Dial Transplant (6 March 2006) by Gisela Schieren, Brigitta Rumberger, Marinella Klein, et al.Clemens Kreutz, Jochen Wilpert, Marcel Geyer, Daniel Faller, Jens Timmer, Ivo Quack, Lars Christian C. Rump, Gerd Walz, Johannes Donauer posted to microarray pkd by ajeffs on 2006-03-10 03:38:10 as
	MicroRNA expression profiles classify human cancers [My Copy] Nature, Vol. 435, No. 7043. (09 June 2005), pp. 834-838. by Jun Lu, Gad Getz, Eric A. Miska, et al.Ezequiel Alvarez-Saavedra, Justin Lamb, David Peck, Alejandro Sweet-Cordero, Benjamin L. Ebert, Raymond H. Mak, Adolfo A. Ferrando, James R. Downing, Tyler Jacks, H. Robert Horvitz, Todd R. Golub posted to cancer microrna by ajeffs on 2006-02-27 02:57:00 as along with 15 people and 2 groups songpku tibbitts abhattac cswinburne jfr tmmurali tuck mtagaya ealloza frohike capitall maralena giovenko srp33 zhouyu Bioinformatics microRNA
	MicroRNAs in cell proliferation, cell death, and tumorigenesis. [My Copy] British journal of cancer, Vol. 94, No. 6. (27 March 2006), pp. 776-780. by H-W W. Hwang, J. T. Mendell posted to cancer microrna by ajeffs on 2006-02-26 23:00:09 as along with 4 people and 5 groups tonamswish marcius andersbj dchughes microRNA G4ID BioinfoCIPF SGU-CIPF Genetics-of-Gambling
	MicroRNA function in animal development. [My Copy] FEBS Lett, Vol. 579, No. 26. (31 October 2005), pp. 5911-5922. by E. Wienholds, R. H. Plasterk posted to development microarray by ajeffs on 2005-12-14 02:13:09 as along with 4 people eckart_bindewald tardigrade balicea mtagaya
	Temporal and spatial transcriptional programs in murine kidney development. [My Copy] Physiol Genomics, Vol. 23, No. 2. (17 October 2005), pp. 159-171. by G. Challen, B. Gardiner, G. Caruana, et al.X. Kostoulias, G. Martinez, M. Crowe, D. F. Taylor, J. Bertram, M. Little, S. M. Grimmond posted to development kidney microarray by ajeffs on 2005-12-13 02:47:59 as
	An optimized isolation and labeling platform for accurate microRNA expression profiling. [My Copy] RNA, Vol. 11, No. 9. (September 2005), pp. 1461-1470. by J. Shingara, K. Keiger, J. Shelton, et al.W. Laosinchai-Wolf, P. Powers, R. Conrad, D. Brown, E. Labourier posted to microarray microrna profiling by ajeffs on 2005-12-13 00:24:36 as along with 2 people tardigrade mtagaya
	MicroRNAs: critical regulators of development, cellular physiology and malignancy. [My Copy] Cell Cycle, Vol. 4, No. 9. (September 2005), pp. 1179-1184. by J. T. Mendell posted to cancer development microrna by ajeffs on 2005-12-13 00:22:19 as along with 1 person eckart_bindewald
	How microRNAs control cell division, differentiation and death [My Copy] Current Opinion in Genetics & Development, Vol. 15, No. 5. (October 2005), pp. 563-568. by Eric A. Miska posted to microrna by ajeffs on 2005-12-13 00:18:10 as along with 3 people and 1 group heliopais textoris eckart_bindewald microRNA
	Real-time expression profiling of microRNA precursors in human cancer cell lines. [My Copy] Nucleic Acids Res, Vol. 33, No. 17. (2005), pp. 5394-5403. by J. Jiang, E. J. Lee, Y. Gusev, T. D. Schmittgen posted to microrna profiling by ajeffs on 2005-12-13 00:16:12 as along with 1 person jfr
	Camels and zebrafish, viruses and cancer: a microRNA update. [My Copy] Hum Mol Genet, Vol. 14 Spec No. 2 (15 October 2005) by E. Berezikov, R. H. Plasterk posted to cancer microrna by ajeffs on 2005-12-13 00:12:32 as along with 1 person eckart_bindewald
	Oncogenic pathway signatures in human cancers as a guide to targeted therapies. [My Copy] Nature, Vol. 439, No. 7074. (19 January 2006), pp. 353-357. by Andrea H. Bild, Guang Yao, Jeffrey T. Chang, et al.Quanli Wang, Anil Potti, Dawn Chasse, Mary-Beth B. Joshi, David Harpole, Johnathan M. Lancaster, Andrew Berchuck, John A. Olson, Jeffrey R. Marks, Holly K. Dressman, Mike West, Joseph R. Nevins posted to cancer microarray profiling by ajeffs on 2005-11-10 01:26:04 as along with 16 people lwaldron bertelsen roys ipark-kaist zufar Yanno guhjy kentsis mfenner tuck maryee eckart_bindewald frohike Ao_Li2007 waghsk srp33
	Renal hypoplasia: lessons from Pax2. [My Copy] Pediatr Nephrol (5 November 2005) by Alison Dziarmaga, Jacklyn Quinlan, Paul Goodyer posted to development kidney pax2 by ajeffs on 2005-11-10 01:23:36 as along with 1 person nelu-ioan
	MicroRNAs as oncogenes and tumor suppressors. [My Copy] N Engl J Med, Vol. 353, No. 17. (27 October 2005), pp. 1768-1771. by C. Z. Chen posted to cancer microrna by ajeffs on 2005-11-04 00:38:29 as along with 3 people and 2 groups mortenlindow ealloza drwang microRNA BioinfoCIPF
	A MicroRNA Signature Associated with Prognosis and Progression in Chronic Lymphocytic Leukemia [My Copy] N Engl J Med, Vol. 353, No. 17. (27 October 2005), pp. 1793-1801. by George A. Calin, Manuela Ferracin, Amelia Cimmino, et al.Gianpiero Di Leva, Masayoshi Shimizu, Sylwia E. Wojcik, Marilena V. Iorio, Rosa Visone, Nurettin I. Sever, Muller Fabbri, Rodolfo Iuliano, Tiziana Palumbo, Flavia Pichiorri, Claudia Roldo, Ramiro Garzon, Cinzia Sevignani, Laura Rassenti, Hansjuerg Alder, Stefano Volinia, Chang-gong Liu, Thomas J. Kipps, Massimo Negrini, Carlo M. Croce posted to cancer microrna profiling by ajeffs on 2005-11-04 00:35:30 as along with 6 people and 1 group tonamswish daforerog brdwilde jfr mfenner mtagaya microRNA
	Segmental expression of Notch and Hairy genes in nephrogenesis. [My Copy] Am J Physiol Renal Physiol, Vol. 288, No. 5. (May 2005) by L. Chen, Q. Al-Awqati posted to development jag1 kidney notch by ajeffs on 2005-10-20 01:45:46 as along with 1 person guhjy
	Crosstalk between Jagged1 and GDNF/Ret/GFRalpha1 signalling regulates ureteric budding and branching. [My Copy] Mech Dev (16 May 2005) by Satu Kuure, Kirsi Sainio, Reetta Vuolteenaho, et al.Mika Ilves, Kirmo Wartiovaara, Tiina Immonen, Jouni Kvist, Seppo Vainio, Hannu Sariola posted to development jag1 kidney by ajeffs on 2005-10-20 01:05:08 as along with 1 person Terkko
	Odd-skipped related 1 (Odd1) is an essential regulator of heart and urogenital development. [My Copy] Dev Biol (10 October 2005) by Qingru Wang, Yu Lan, Eui-Sic S. Cho, Kathleen M M. Maltby, Rulang Jiang posted to no-tag by ajeffs on 2005-10-19 00:34:57 as
	GZF1, a new GDNF-inducible gene, is required for renal branching morphogenesis [My Copy] Kidney International, Vol. 68, No. 5. (November 2005), pp. 1964-1964. by Naoyuki Fukuda, Takatoshi Morinaga, Seiichi Matsuo posted to development gzf1 kidney by ajeffs on 2005-10-16 21:44:52 as
	Lim1 is required for nephric duct extension and ureteric bud morphogenesis. [My Copy] Dev Biol (6 October 2005) by Anissa Pedersen, Christian Skjong, William Shawlot posted to development kidney lim1 mouse by ajeffs on 2005-10-13 21:15:47 as
	Gene profiling study of G3139- and Bcl-2-targeting siRNAs identifies a unique G3139 molecular signature [My Copy] Cancer Gene Therapy, Vol. aop, No. current. by E. M. Anderson, P. Miller, D. Ilsley, et al.W. Marshall, A. Khvorova, C. A. Stein, L. Benimetskaya posted to antisense bcl-2 microarray off-target sirna by ajeffs on 2005-10-04 02:20:46 as
	Wilms' tumour: connecting tumorigenesis and organ development in the kidney [My Copy] Nature Reviews Cancer, Vol. 5, No. 9. (01 September 2005), pp. 699-712. by Miguel N. Rivera, Daniel A. Haber posted to cancer kidney nephroblastoma tumour wilms by ajeffs on 2005-09-26 01:36:06 as
	BMP4 signaling is involved in the generation of inner ear sensory epithelia. [My Copy] BMC Dev Biol, Vol. 5, No. 1. (17 August 2005) by Huawei Li, Carleton E. Corrales, Zhengmin Wang, et al.Yanling Zhao, Yucheng Wang, Hong Liu, Stefan Heller posted to bmp4 development by ajeffs on 2005-08-22 02:58:42 as
	BMPs and BMP receptors in mouse metanephric development: in vivo and in vitro studies. [My Copy] Int J Dev Biol, Vol. 46, No. 4. (2002), pp. 525-533. by G. Martinez, Y. Mishina, J. F. Bertram posted to bmp4 development kidney by ajeffs on 2005-08-19 01:16:15 as
	Branching ducts similar to mesonephric ducts or ureteric buds in teratomas originating from mouse embryonic stem cells. [My Copy] Am J Physiol Renal Physiol (16 August 2005) by Makoto Yamamoto, Li Cui, Kohei Johkura, et al.Kazuhiko Asanuma, Yasumitsu Okouchi, Naoko Ogiwara, Katsunori Sasaki posted to cancer cell pax2 stem by ajeffs on 2005-08-19 00:53:39 as
	Retinoblastoma protein acts as Pax 8 transcriptional coactivator [My Copy] Oncogene, Vol. aop, No. current. by Stefania Miccadei, Claudia Provenzano, Martin Mojzisek, Pier G. Natali, Donato Civitareale, posted to pax8 prb thyroid transcription by ajeffs on 2005-07-14 03:06:06 as
	The role of XTRAP-gamma in Xenopus pronephros development. [My Copy] Int J Dev Biol, Vol. 49, No. 4. (2005), pp. 401-408. by D. H. Li, T. Chan, R. Satow, S. Komazaki, K. Hashizume, M. Asashima posted to development kidney pax2 xenopus by ajeffs on 2005-06-24 01:08:22 as
	Pax3/Pax7 mark a novel population of primitive myogenic cells during development. [My Copy] Genes Dev, Vol. 19, No. 12. (15 June 2005), pp. 1426-1431. by L. Kassar-Duchossoy, E. Giacone, B. Gayraud-Morel, A. Jory, D. Gomès, S. Tajbakhsh posted to development pax3 by ajeffs on 2005-06-22 22:01:50 as
	Expression, regulation, and function of PAX8 in the human placenta and placental cancer cell lines. [My Copy] Endocrinology (16 June 2005) by Elisabetta Ferretti, Franco Arturi, Tiziana Mattei, et al.Angela Scipioni, Gianluca Tell, Emanuele Tosi, Ivan Presta, Roberta Morisi, Ludovic Lacroix, Alberto Gulino, Diego Russo, Giuseppe Damante, Sebastiano Filetti posted to cancer pax8 placenta by ajeffs on 2005-06-22 01:48:31 as
	Multiple markers for melanoma progression regulated by DNA methylation: insights from transcriptomic studies. [My Copy] Carcinogenesis (15 June 2005) by William M M. Gallagher, Orla E E. Bergin, Mairin Rafferty, et al.Zoë D D. Kelly, Ilse-Maria M. Nolan, Edward J P J. Fox, Aedin C C. Culhane, Linda McArdle, Mario F F. Fraga, Linda Hughes, Caroline A A. Currid, Fiona O'mahony, Aileen Byrne, Alison A A. Murphy, Catherine Moss, Susan McDonnell, Raymond L L. Stallings, Jane A A. Plumb, Manel Esteller, Robert Brown, Peter A A. Dervan, David J J. Easty posted to melanoma methylation microarray by ajeffs on 2005-06-20 22:06:21 as
	Relationship of XIST expression and responses of ovarian cancer to chemotherapy. [My Copy] Mol Cancer Ther, Vol. 1, No. 10. (August 2002), pp. 769-776. by K. C. Huang, P. H. Rao, C. C. Lau, et al.E. Heard, S. K. Ng, C. Brown, S. C. Mok, R. S. Berkowitz, S. W. Ng posted to cancer xist by ajeffs on 2005-06-20 05:06:42 as

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microarray	17
melanoma	14
cancer	14
development	12
microrna	10
kidney	9
profiling	5
pax3	4
pax2	3
cell	2
pax8	2
mapk	2
stem	2
jag1	2
antisense	2
bmp4	2
methylation	1
transcription	1
prb	1
gzf1	1
braf	1
bcl-2	1
melanocyte	1
thyroid	1
mitf	1
rhabdomyosarcoma	1
mouse	1
agilent	1
invadopodia	1
cdkn2a	1
cgh	1
lim1	1
preprocessing	1
proteomics	1
phenotype-switch	1
pkd	1
nephroblastoma	1
off-target	1
tumour	1
sirna	1
notch	1
geneexpression	1
xenopus	1
review	1
wilms	1
placenta	1
xist	1

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