ale's library 34 articles Export

	What is principal component analysis? [My Copy] Nature biotechnology, Vol. 26, No. 3. (01 March 2008), pp. 303-304. by Markus Ringnér posted to algorithm statistics tutorial by ale on 2008-07-24 14:28:39 as along with 71 people and 3 groups frohike krapnik singhsh Jporci tnhh ruvido ucbcjbm daforerog Diego_Prada abellogin nguizard thegoose2 arsyed Zephyrus flips svozil VGreiff kaniko ssgong Yanno guhjy operon barry baaic dullhunk Bevan_Weir zeji gareth massivemayhem zwang GustavoLacerda GeeSharpMinor bmaust zambujo mingzhi starz1010101 maralena wchannels sunhwan jennifermbui kdelavega zhouyu rsantana sobolevnrm fryanpan kengg rvosa dekay23 adacier hpaces waghsk rchauhan pavanghatty kristgy jfr bibay2004 xingxu quianominorleo craigwilson06 ashko markusd dayjm dimka i-stevenson chrissp100 tharris mjoach HugoMarcelo jdiezperezj rrbarb Nici baker-group FAB-lab Bioinformatics
	What are artificial neural networks? [My Copy] Nature biotechnology, Vol. 26, No. 2. (February 2008), pp. 195-197. by Anders Krogh posted to ai algorithm tutorial by ale on 2008-07-24 14:25:19 as along with 14 people lrachman daforerog Yanno guhjy dullhunk zwang cabbagezs asddd sci91078 jfr adacier mjoach marck bertelsen
	Sampling the Arabidopsis transcriptome with massively parallel pyrosequencing. [My Copy] Plant Physiol, Vol. 144, No. 1. (May 2007), pp. 32-42. by A. P. Weber, K. L. Weber, K. Carr, C. Wilkerson, J. B. Ohlrogge posted to est genomics pyrosequencing by ale on 2008-07-08 10:19:01 as along with 4 people and 1 group malcook usagi-kirin mlfederico alexisfjdufresne SIMR bioinformatics
	Regulatory circuit of human microRNA biogenesis [My Copy] PLoS Computational Biology, Vol. preprint, No. 2007. (1 February 2007), e67.eor. by Ji Lee, Zhihua Li, Rachel Brower-Sinning, Bino John posted to mirna by ale on 2008-07-03 14:27:50 as along with 3 people and 1 group ealloza Garamonfok maralena BioinfoCIPF
	The Mirtron Pathway Generates microRNA-Class Regulatory RNAs in Drosophila [My Copy] Cell, Vol. 130, No. 1. (13 July 2007), pp. 89-100. by Katsutomo Okamura, Joshua W. Hagen, Hong Duan, David M. Tyler, Eric C. Lai posted to mirna mirtron by ale on 2008-07-03 14:20:43 as along with 1 person sebastien_vigneau
	Mammalian mirtron genes. [My Copy] Molecular cell, Vol. 28, No. 2. (26 October 2007), pp. 328-336. by Eugene Berezikov, Wei-Jen J. Chung, Jason Willis, Edwin Cuppen, Eric C. Lai posted to mirna mirtron by ale on 2008-07-03 14:19:23 as along with 8 people and 1 group giovenko galka8_diploma valeriehilgers heliopais dchughes cabbagezs hpaces tolot27 microRNA
	Intronic microRNA precursors that bypass Drosha processing. [My Copy] Nature, Vol. 448, No. 7149. (5 June 2007), pp. 83-86. by Graham J. Ruby, Calvin H. Jan, David P. Bartel posted to mirna mirtron by ale on 2008-07-03 14:08:58 as along with 14 people and 5 groups guhjy giovenko galka8_diploma thegoose2 daforerog omegas GustavoLacerda tharris dpollard gpalidwor andersbj stajich Garamonfok tolot27 C. elegans / WormBase Bioinformatics EisenLab microRNA Mycology
	Genomic Organization of Zebrafish microRNAs [My Copy] BMC Genomics, Vol. 9 (29 May 2008), 253. by Elizabeth J. Thatcher, Jordan M. Bond, Ima Paydar, James G. Patton posted to genomics mirna by ale on 2008-07-03 14:05:31 as along with 1 person daforerog
	REEF: searching REgionally Enriched Features in genomes [My Copy] BMC Bioinformatics, Vol. 7 (16 October 2006), 453. by Alessandro Coppe, Gian A. Danieli, Stefania Bortoluzzi posted to positional-clustering software by ale on 2008-05-21 09:43:56 as
	Systematic discovery of regulatory motifs in human promoters and 3[prime] UTRs by comparison of several mammals [My Copy] Nature, Vol. aop, No. current. (27 February 2005) by Xiaohui Xie, Jun Lu, E. J. Kulbokas, et al.Todd R. Golub, Vamsi Mootha, Kerstin Lindblad-Toh, Eric S. Lander, Manolis Kellis posted to motifs promoter by ale on 2007-12-07 15:07:54 as along with 28 people and 4 groups Dulce wowalz maximilianh_otx hagechouchin443 sterovetta kieran101 snuppepuppan BioGeek briann jtextori tmmurali okarsligil jfr balajis lyongu eckart_bindewald mtagaya adepace fisherp nickluscombe panetebrother smiddha franklin oscarluoinau heliopais emptyhb maralena mariakmejia Bioinformatics EisenLab microRNA EBI-regulation
	Patterns of flanking sequence conservation and a characteristic upstream motif for microRNA gene identification [My Copy] RNA, Vol. 10, No. 9. (September 2004), pp. 1309-1322. by U. W. E. Ohler, Soraya Yekta, Lee P. Lim, David P. Bartel, Christopher B. Burge posted to expression-regulation mirna motifs promoter by ale on 2007-12-07 15:05:00 as along with 5 people and 2 groups thegoose2 pengchy heliopais tharris bootsy microRNA C. elegans / WormBase
	A steganalysis-based approach to comprehensive identification and characterization of functional regulatory elements [My Copy] Genome Biology, Vol. 7 (20 June 2006), R49. by Guandong Wang, Weixiong Zhang posted to algorithm motifs software by ale on 2007-12-07 15:03:30 as along with 2 people and 1 group indigoviolet dquest EisenLab
	Wasp Gene Expression Supports an Evolutionary Link Between Maternal Behavior and Eusociality [My Copy] Science (27 September 2007), 1146647. by Amy L. Toth, Kranthi Varala, Thomas C. Newman, et al.Fernando E. Miguez, Stephen K. Hutchison, David A. Willoughby, Jan F. Simons, Michael Egholm, James H. Hunt, Matthew E. Hudson, Gene E. Robinson posted to evolution expression-regulation by ale on 2007-12-06 14:29:59 as along with 3 people stajich zwang niallhaslam
	MicroRNA control of Nodal signalling [My Copy] Nature (29 August 2007) by Graziano Martello, Luca Zacchigna, Masafumi Inui, et al.Marco Montagner, Maddalena Adorno, Anant Mamidi, Leonardo Morsut, Sandra Soligo, Uyen Tran, Sirio Dupont, Michelangelo Cordenonsi, Oliver Wessely, Stefano Piccolo posted to development mirna by ale on 2007-12-05 23:33:54 as along with 3 people and 1 group andersbj blobbybirdman maralena microRNA
	Prediction of synergistic transcription factors by function conservation [My Copy] Genome Biology, Vol. 8, No. 12. (2007) by Zihua Hu, Boyu Hu, James Collins posted to bioinformatics expression-regulation motifs promoter by ale on 2007-12-05 23:25:20 as along with 3 people and 1 group cjeans nklee maximilianh cis-regulatory-evolution
	MicroRNA genes are transcribed by RNA polymerase II. [My Copy] EMBO J, Vol. 23, No. 20. (13 October 2004), pp. 4051-4060. by Y. Lee, M. Kim, J. Han, et al.K. H. Yeom, S. Lee, S. H. Baek, V. N. Kim posted to expression-regulation mirna by ale on 2007-11-19 15:41:28 as along with 7 people and 2 groups tonamswish daforerog heliopais mtagaya cdawson N0131826 maralena microRNA GIG
	Unraveling transcriptional control and cis-regulatory codes using the software suite GENEACT [My Copy] Genome Biology, Vol. 7 (25 October 2006), R97. by Tom H. Cheung, Yin L. Kwan, Micah Hamady, Xuedong Liu posted to bioinformatics expression-regulation promoter software by ale on 2007-11-18 00:17:13 as along with 2 people and 1 group jfr andersbj microRNA
	Characterization and Identification of MicroRNA Core Promoters in Four Model Species [My Copy] PLoS Comput Biol, Vol. 3, No. 3. (9 March 2007), e37. by Xuefeng Zhou, Jianhua Ruan, Guandong Wang, Weixiong Zhang posted to bioinformatics comparative-genomics expression-regulation mirna promoter by ale on 2007-11-18 00:15:18 as along with 15 people and 3 groups danaiancu thegoose2 daforerog rpatward natstreet druvus tharris heliopais jfr tardigrade andersbj cdawson maralena bootsy xili03 C. elegans / WormBase microRNA GIG
	Global and Local Architecture of the Mammalian microRNA–Transcription Factor Regulatory Network [My Copy] PLoS Comput Biol, Vol. 3, No. 7. (13 July 2007), e131. by Reut Shalgi, Daniel Lieber, Moshe Oren, Yitzhak Pilpel posted to bioinformatics expression-regulation mirna network promoter by ale on 2007-11-18 00:12:22 as along with 17 people and 2 groups danaiancu tonamswish myzhang daforerog mtagaya jfr andersbj rdiaz sebastien_vigneau ealloza zwang bootsy cabbagezs rahulthadani heliopais maralena kevinemamy Bioinformatics microRNA
	MicroRNA promoter element discovery in Arabidopsis [My Copy] RNA, Vol. 12, No. 9. (3 September 2006), pp. 1612-1619. by Molly Megraw, Vesselin Baev, Ventsislav Rusinov, Shane T. Jensen, Kriton Kalantidis, Artemis G. Hatzigeorgiou posted to bioinformatics expression-regulation mirna motifs promoter by ale on 2007-11-18 00:04:14 as along with 9 people and 2 groups heliopais natstreet druvus tardigrade cdawson byy bootsy maralena xili03 microRNA GIG
	MicroRNA gets down to business [My Copy] Nature Biotechnology, Vol. 25, No. 6., pp. 631-638. by George S. Mack posted to expression-regulation mirna review by ale on 2007-11-16 09:13:13 as
	Prediction of microRNA targets. [My Copy] Drug Discov Today, Vol. 12, No. 11-12. (June 2007), pp. 452-458. by P. Mazière, A. J. Enright posted to algorithm bioinformatics expression-regulation mirna review by ale on 2007-11-16 09:05:03 as along with 10 people and 2 groups coldmeadow guhjy jfr tardigrade andersbj mtagaya lp2 jayster4 maralena heliopais Bioinformatics microRNA
	Genomics of microRNA [My Copy] Trends in Genetics, Vol. 22, No. 3. (27 March 2006), pp. 165-173. by V. Kim, J. Nam posted to expression-regulation mirna review by ale on 2007-11-16 09:02:57 as along with 12 people and 6 groups dayjm heliopais GustavoLacerda marcius eckart_bindewald tardigrade andersbj dchughes mtagaya stajich Garamonfok jo_davies Bioinformatics microRNA G4ID BioinfoCIPF SGU-CIPF Genetics-of-Gambling
	A Computational Approach to the Functional Screening of Genomes [My Copy] PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e174. by Davide Chiarugi, Pierpaolo Degano, Roberto Marangoni posted to algorithm bioinformatics comparative-genomics by ale on 2007-11-12 09:16:16 as along with 3 people and 1 group cjeans zwang hpaces Bioinformatics
	How does eukaryotic gene prediction work? [My Copy] Nature Biotechnology, Vol. 25, No. 8. (01 August 2007), pp. 883-885. by Michael R. Brent posted to no-tag by ale on 2007-11-11 22:04:06 as along with 8 people and 3 groups Jporci guhjy indigoviolet dchughes wenhan zwang cabbagezs nklee EisenLab G4ID Genetics-of-Gambling
	Navigating gene expression using microarrays [mdash] a technology review [My Copy] Nat Cell Biol, Vol. 3, No. 8. (August 2001), pp. E190-E195. by Almut Schulze, Julian Downward posted to expression-regulation microarray review by ale on 2007-11-11 21:38:18 as along with 8 people and 2 groups kentz ziquje numata alokm balicea dchughes jo_davies mcox G4ID Genetics-of-Gambling
	Microarray expression technology: from start to finish [My Copy] pp. 123-134. by Gareth Elvidge posted to expression-regulation microarray review by ale on 2007-11-11 21:36:11 as
	An ORFeome-based analysis of human transcription factor genes and the construction of a microarray to interrogate their expression. [My Copy] Genome Res, Vol. 14, No. 10B. (October 2004), pp. 2041-2047. by D. N. Messina, J. Glasscock, W. Gish, M. Lovett posted to expression-regulation by ale on 2007-11-09 14:59:55 as along with 4 people and 1 group isimpson tabu nickluscombe mariakmejia EBI-regulation
	Extracting regulatory sites from the upstream region of yeast genes by computational analysis of oligonucleotide frequencies1 [My Copy] Journal of Molecular Biology, Vol. 281, No. 5. (04 September 1998), pp. 827-842. by J. van Helden, B. André, J. Collado-Vides posted to algorithm expression-regulation motifs promoter by ale on 2007-11-09 12:56:14 as along with 6 people Dulce wowalz druvus dquest johncumbers smiddha
	Wide-Scale Analysis of Human Functional Transcription Factor Binding Reveals a Strong Bias towards the Transcription Start Site [My Copy] PLoS ONE, Vol. 2, No. 8. (29 August 2007) by Tabach, R. Brosh, Y. Buganim, et al. Reiner, O. Zuk, A. Yitzhaky, M. Koudritsky, V. Rotter, E. Domany posted to expression-regulation motifs by ale on 2007-11-09 11:27:31 as
	Bioinformatics code must enforce citation [My Copy] Nature, Vol. 417, No. 6889. (6 June 2002), pp. 588-588. by David J. States posted to bioinformatics opinion sourcecode by ale on 2007-11-09 11:20:06 as along with 3 people moborg dullhunk hpiwowar
	Clustering of DNA Sequences in Human Promoters [My Copy] Genome Research, Vol. 14, No. 8. (1 August 2004), pp. 1562-1574. by Peter C. FitzGerald, Andrey Shlyakhtenko, Alain A. Mir, Charles Vinson posted to expression-regulation by ale on 2007-11-09 10:09:26 as along with 4 people rb_india nklee myrtilus smiddha
	Genome-wide analyses reveal properties of redundant and specific promoter occupancy within the ETS gene family [My Copy] Genes Dev., Vol. 21, No. 15. (1 August 2007), pp. 1882-1894. by Peter C. Hollenhorst, Atul A. Shah, Christopher Hopkins, Barbara J. Graves posted to expression-regulation by ale on 2007-11-09 09:38:20 as along with 2 people zwang sbranco
	The Global Landscape of Sequence Diversity [My Copy] Genome Biology, Vol. 8 (08 November 2007), R238. by Jose M. Peregrin-Alvarez, John Parkinson posted to comparative-genomics by ale on 2007-11-09 09:27:43 as along with 5 people shung skhadar gpalidwor cjeans hpaces

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