alessandroparini's library 21 articles Export

	Prediction of plant microRNA targets. [My Copy] Cell, Vol. 110, No. 4. (23 August 2002), pp. 513-520. by M. W. Rhoades, B. J. Reinhart, L. P. Lim, C. B. Burge, B. Bartel, D. P. Bartel posted to mirna target target_prediction by alessandroparini on 2009-03-20 18:09:07 as along with 2 people and 1 group xwbcn cdawson GIG
	Basic local alignment search tool. [My Copy] Journal of molecular biology, Vol. 215, No. 3. (5 October 1990), pp. 403-410. by S. F. Altschul, W. Gish, W. Miller, E. W. Myers, D. J. Lipman posted to blast local_alignnment by alessandroparini on 2009-03-18 16:53:51 as along with 77 people and 6 groups VGreiff richter80 krapnik azazello rshe mtaschuk sjcockell niallhaslam djohnson thegoose humburg timhubbard pachorip n00c maria_hauser rpetrenko parnell yylin esyoun APRegier idoerg Neeperando robert85 thegoose2 daforerog mcbla coela bertelsen Blackbeard florisbuijzen laurabailey treangen pwais mmartin tharris dmp camster davidng evaf dragonrez jwm jmeppley Ayest RMGraze ea yas balajis alexg indigoviolet moborg arcticrasta dullhunk dgront caporaso michC myui BioNica CitoJam rabio timflutre lusk cjeans incovoma beatrizfernandez wenhan jtomasch GustavoLacerda sgoetz siebertm ichbins81 jofiel Thaverkamp shung marti ashaytan benwei granujilla C. elegans / WormBase dbk-lab EisenLab T_lab biomedical-nlp Microbial-Ecology
	Identification of common molecular subsequences. [My Copy] Journal of molecular biology, Vol. 147, No. 1. (25 March 1981), pp. 195-197. by T. F. Smith, M. S. Waterman posted to sequence_alignment by alessandroparini on 2009-03-18 15:49:04 as along with 21 people rshe jengeldk maria_hauser jmanning2k cmor parnell adamnellis timflutre heliopais mcbla usagi-kirin creswick vavi bicko dgront rabio cjeans incovoma sujaikumar newton1234 bozdagd
	Partition function and base pairing probabilities of RNA heterodimers [My Copy] Algorithms for Molecular Biology, Vol. 1 (16 March 2006), 3. by Stephan H. Bernhart, Hakim Tafer, Ulrike Mückstein, Christoph Flamm, Peter F. Stadler, Ivo L. Hofacker posted to cofolding rnacodolf rnalib vienna by alessandroparini on 2009-01-07 19:05:47 as along with 3 people heliopais cassj ilh
	Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes. [My Copy] Genome Res, Vol. 15, No. 8. (August 2005), pp. 1034-1050. by A. Siepel, G. Bejerano, J. S. Pedersen, et al.A. S. Hinrichs, M. Hou, K. Rosenbloom, H. Clawson, J. Spieth, L. W. Hillier, S. Richards, G. M. Weinstock, R. K. Wilson, R. A. Gibbs, W. J. Kent, W. Miller, D. Haussler posted to hmm phastcons phylogenetic sequence_alignment by alessandroparini on 2009-01-07 18:28:06 as along with 20 people and 4 groups thegoose2 farhat skembel tharris bpb aprasad balajis eckart_bindewald indigoviolet brant pradiptaray adepace djkt olympos sujaikumar Stew cisevol dmc elfar AlexanderPico C. elegans / WormBase EisenLab cis-regulatory-evolution ConklinLab
	A Hidden Markov Model approach to variation among sites in rate of evolution. [My Copy] Molecular biology and evolution, Vol. 13, No. 1. (January 1996), pp. 93-104. by J. Felsenstein, G. A. Churchill posted to conservation phastcons phylogenetic by alessandroparini on 2009-01-07 17:52:37 as along with 5 people sameersoi cmzmasek balicea gennaro tale
	Complete suboptimal folding of RNA and the stability of secondary structures. [My Copy] Biopolymers, Vol. 49, No. 2. (February 1999), pp. 145-165. by S. Wuchty, W. Fontana, I. L. Hofacker, P. Schuster posted to free_energy rna rnalib vienna by alessandroparini on 2009-01-07 00:03:39 as along with 6 people and 2 groups rb_india heliopais marcius eckart_bindewald arcticrasta ilh BioinfoCIPF SGU-CIPF
	Identification of common molecular subsequences [My Copy] Journal of Molecular Biology, Vol. 147, No. 1. (25 March 1981), pp. 195-197. by T. Smith posted to algorithm sequence_alignment by alessandroparini on 2009-01-06 23:07:11 as along with 6 people stharward farhat sebk BioNica jofiel elfar
	Prediction of Mammalian MicroRNA Targets [My Copy] Cell, Vol. 115, No. 7. (26 December 2003), pp. 787-798. by Benjamin P. Lewis, I-hung Shih, Matthew W. Jones-Rhoades, David P. Bartel, Christopher B. Burge posted to mirna mirna-method target target_prediction by alessandroparini on 2009-01-06 22:13:42 as along with 3 people and 1 group stharward heliopais maralena microRNA
	Fast and effective prediction of microRNA/target duplexes [My Copy] RNA, Vol. 10, No. 10. (October 2004), pp. 1507-1517. by M. A. R. C. Rehmsmeier, Peter Steffen, Matthias Hãchsmann, Robert Giegerich posted to mirna mirna-method target target_prediction by alessandroparini on 2009-01-06 22:12:24 as along with 7 people and 2 groups stharward dswan eckart_bindewald mortenlindow mtagaya Hosna maralena Bioinformatics microRNA
	A Pattern-Based Method for the Identification of MicroRNA Binding Sites and Their Corresponding Heteroduplexes [My Copy] Cell, Vol. 126, No. 6. (22 September 2006), pp. 1203-1217. by Kevin C. Miranda, Tien Huynh, Yvonne Tay, et al.Yen-Sin Ang, Wai-Leong Tam, Andrew M. Thomson, Bing Lim, Isidore Rigoutsos posted to mirna mirna-method target target_prediction by alessandroparini on 2009-01-06 22:12:08 as along with 9 people and 2 groups stharward apostola jfr tuck tardigrade andersbj kengg joshuashen natstreet microRNA Plantandetc
	The role of site accessibility in microRNA target recognition [My Copy] Nature Genetics, Vol. 39, No. 10. (23 September 2007), pp. 1278-1284. by Michael Kertesz, Nicola Iovino, Ulrich Unnerstall, Ulrike Gaul, Eran Segal posted to mirna mirna-method target target_prediction by alessandroparini on 2009-01-06 22:11:41 as along with 17 people and 1 group frohike daforerog jfr mtagaya rdiaz Hosna djkt Garamonfok physics bootsy epigenetics lp2 cabbagezs heliopais uwe yavanna maralena microRNA
	Naive Bayes for MicroRNA Target Predictions Machine Learning for MicroRNA Targets. [My Copy] Bioinformatics (8 October 2007) by Malik Yousef, Segun Jung, Andrew V V. Kossenkov, Louise C C. Showe, Michael K K. Showe posted to miranda mirna-method target target_prediction by alessandroparini on 2009-01-06 22:10:39 as along with 6 people and 1 group ashishanand mtagaya ealloza cabbagezs heliopais maralena microRNA
	Combinatorial microRNA target predictions [My Copy] Nat Genet, Vol. 37, No. 5. (03 May 2005), pp. 495-500. by Azra Krek, Dominic Grun, Matthew N. Poy, et al.Rachel Wolf, Lauren Rosenberg, Eric J. Epstein, Philip MacMenamin, Isabelle da Piedade, Kristin C. Gunsalus, Markus Stoffel, Nikolaus Rajewsky posted to mirna mirna-method target target_prediction by alessandroparini on 2009-01-06 22:09:58 as along with 12 people and 1 group stharward jfr tmmurali textoris eckart_bindewald tardigrade mtagaya feipan lp2 heliopais bootsy maralena microRNA
	miTarget: microRNA target-gene prediction using a Support Vector Machine [My Copy] BMC Bioinformatics, Vol. 7 (18 September 2006), 411. by Sung-Kyu Kim, Jin-Wu Nam, Je-Keun Rhee, Wha-Jin Lee, Byoung-Tak Zhang posted to mirna mirna-method target target_prediction by alessandroparini on 2009-01-06 22:08:48 as along with 4 people and 1 group jfr tardigrade heliopais maralena microRNA
	Prediction of both conserved and nonconserved microRNA targets in animals [My Copy] Bioinformatics (29 November 2007), btm595. by Xiaowei Wang, El posted to mirna mirna-method mirtarget2 target by alessandroparini on 2009-01-06 22:05:04 as along with 7 people and 1 group giovenko guhjy jfr bootsy lp2 heliopais Alexander_Kanitz microRNA
	MicroRNA targets in Drosophila. [My Copy] Genome Biol, Vol. 5, No. 1. (2003) by A. J. Enright, B. John, U. Gaul, T. Tuschl, C. Sander, D. S. Marks posted to miranda mirna mirna-method target by alessandroparini on 2009-01-06 21:19:06 as along with 8 people and 1 group wrowell capitall heliopais eckart_bindewald mortenlindow dsm Garamonfok maralena microRNA
	A combined computational-experimental approach predicts human microRNA targets. [My Copy] Genes Dev, Vol. 18, No. 10. (15 May 2004), pp. 1165-1178. by M. Kiriakidou, P. T. Nelson, A. Kouranov, et al.P. Fitziev, C. Bouyioukos, Z. Mourelatos, A. Hatzigeorgiou posted to diana-microt mirna mirna-method target by alessandroparini on 2009-01-06 21:17:41 as along with 5 people and 1 group ashishanand eckart_bindewald tardigrade mtagaya heliopais microRNA
	MicroInspector: a web tool for detection of miRNA binding sites in an RNA sequence. [My Copy] Nucleic acids research, Vol. 33, No. Web Server issue. (1 July 2005) by V. Rusinov, V. Baev, I. N. Minkov, M. Tabler posted to microinspector mirna target by alessandroparini on 2009-01-06 21:15:14 as
	Genomic profiling reveals alternative genetic pathways of prostate tumorigenesis. [My Copy] Cancer research, Vol. 67, No. 18. (15 September 2007), pp. 8504-8510. by J. Lapointe, C. Li, C. P. Giacomini, et al.K. Salari, S. Huang, P. Wang, M. Ferrari, T. Hernandez-Boussard, J. D. Brooks, J. R. Pollack posted to cancer gene microarray prostate by alessandroparini on 2009-01-06 15:32:19 as
	Gene expression profiling identifies clinically relevant subtypes of prostate cancer [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 3. (20 January 2004), pp. 811-816. by Jacques Lapointe, Chunde Li, John P. Higgins, et al.Matt van de Rijn, Eric Bair, Kelli Montgomery, Michelle Ferrari, Lars Egevad, Walter Rayford, Ulf Bergerheim, Peter Ekman, Angelo M. DeMarzo, Robert Tibshirani, David Botstein, Patrick O. Brown, James D. Brooks, Jonathan R. Pollack posted to cancer gene microarray prostate by alessandroparini on 2009-01-06 15:31:17 as along with 3 people ipark-kaist jfr tenaciousz425

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target	12
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mirna-method	10
target_prediction	8
sequence_alignment	3
cancer	2
gene	2
microarray	2
miranda	2
phastcons	2
phylogenetic	2
prostate	2
rnalib	2
vienna	2
algorithm	1
blast	1
cofolding	1
conservation	1
diana-microt	1
free_energy	1
hmm	1
local_alignnment	1
microinspector	1
mirtarget2	1
rna	1
rnacodolf	1

alessandroparini's library 21 articles Export

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