anallam's library 30 articles Export

	Accelerating Scientific Applications with the SRC-6 Reconfigurable Computer: Methodologies and Analysis [My Copy] Parallel and Distributed Processing Symposium, International, Vol. 4 (2005), 157b. by Melissa C. Smith, Jeffery S. Vetter, Xuejun Liang posted to no-tag by anallam on 2009-12-02 21:02:26 as
	Analytical modeling of high performance reconfigurable computers: prediction and analysis of system performance [My Copy] (2003) by Melissa C. Smith posted to no-tag by anallam on 2009-12-02 21:01:01 as along with 1 person smithmc
	Evaluating FPGAs for floating-point performance [My Copy] High-Performance Reconfigurable Computing Technology and Applications, 2008. HPRCTA 2008. Second International Workshop on (16 November 2008), pp. 1-6. by D. Strenski, J. Simkins, R. Walke, R. Wittig posted to no-tag by anallam on 2009-12-02 20:50:39 as
	Particle mesh Ewald: An N-log(N) method for Ewald sums in large systems [My Copy] The Journal of Chemical Physics, Vol. 98, No. 12. (1993), pp. 10089-10092. by Tom Darden, Darrin York, Lee Pedersen posted to no-tag by anallam on 2009-12-02 20:47:00 as along with 13 people sunnytov bmduggan rpetrenko r2s2 robertvacha A_Coletta_Thesis mleis and_ped10 allmensch easybakemuffin RamuAnandakrishnan tji ashaytan
	CHARMM: A program for macromolecular energy, minimization, and dynamics calculations [My Copy] Journal of Computational Chemistry, Vol. 4, No. 2. (FebruaryFebruary 1983), pp. 187-217. by Bernard R. Brooks, Robert E. Bruccoleri, Barry D. Olafson, David J. States, S. Swaminathan, Martin Karplus posted to no-tag by anallam on 2009-12-02 20:46:23 as along with 18 people ckmyo ubcg08l flbarroso nickolay newton1234 kgutwin r2s2 rpetrenko oceanwind RamuAnandakrishnan tovrstra dfgreen Lombardo_7 dgront mmuecke rabio saravan gisle
	Journal of Computational Physics, vol 117, p 1--19 (1 March 1995) Fast Parallel Algorithms for Short--Range Molecular Dynamics [My Copy] Journal of Computational Physics, Vol. 117 (1995), pp. 1-19. by Steve P. Parallel, Steve Plimpton posted to no-tag by anallam on 2009-12-02 20:43:15 as
	Simulation and embedded software development for Anton, a parallel machine with heterogeneous multicore ASICs [My Copy] In CODES/ISSS '08: Proceedings of the 6th IEEE/ACM/IFIP international conference on Hardware/Software codesign and system synthesis (2008), pp. 125-130. by J. P. Grossman, Cliff Young, Joseph A. Bank, et al.Kenneth Mackenzie, Douglas J. Ierardi, John K. Salmon, Ron O. Dror, David E. Shaw posted to no-tag by anallam on 2009-11-29 22:12:20 as
	Acceleration Methodology for the Implementation of Scientific Application on Reconfigurable Hardware [My Copy] (May 2009) by Phillip M. Martin posted to no-tag by anallam on 2009-11-23 06:06:21 as
	Adventures in Improving the Scaling and Accuracy of a Parallel Molecular Dynamics Program [My Copy] J. Supercomput., Vol. 11, No. 3. (1 November 1997), pp. 255-278. by Michael Crowley, Tom Darden, Thomas Cheatham, David Deerfield posted to no-tag by anallam on 2009-11-20 06:45:33 as along with 2 people adilson_mohr mmuecke
	SRC-7 Carte™ v3.2 C Programming Environment Guide [My Copy] (June 2009) posted to no-tag by anallam on 2009-11-20 06:42:24 as
	Introduction to the SRC-7 MAPstation(http://www.srccomputers.com) [My Copy] posted to no-tag by anallam on 2009-11-20 06:39:05 as
	LAMMPS home page http://lammps.sandia.gov [My Copy] posted to no-tag by anallam on 2009-11-20 06:33:14 as
	The Amber Molecular Dynamics Package http://amber.scripps.edu [My Copy] posted to no-tag by anallam on 2009-11-20 06:30:54 as
	Application Development on the SRC Computers, Inc. Systems [My Copy] In IPDPS '05: Proceedings of the 19th IEEE International Parallel and Distributed Processing Symposium (IPDPS'05) - Papers (2005) by Daniel S. Poznanovic posted to no-tag by anallam on 2009-11-18 05:45:42 as
	Stratix II Device Handbook, Volume 1 [My Copy] posted to no-tag by anallam on 2009-11-17 21:14:49 as
	Reconfigurable computing: a survey of systems and software [My Copy] ACM Comput. Surv., Vol. 34, No. 2. (June 2002), pp. 171-210. by Katherine Compton, Scott Hauck posted to no-tag by anallam on 2009-11-17 20:55:50 as along with 14 people and 3 groups coreyprovencher ericschung hannibal_08 mzabidi sonofnel peskin iammealva Seenu clarence mmuecke silvangraf smithmc periodic hn82123 RC_FCU Reconfigurable Computing infolab, USTC
	Computing Lennard-Jones Potentials and Forces with Reconfigurable Hardware [My Copy] In International Conference on Engineering of Reconfigurable Systems and Algorithm (2004) by Ronald Scrofano, Viktor K. Prasanna posted to no-tag by anallam on 2009-11-17 05:50:30 as
	Reconfigurable molecular dynamics simulator [My Copy] 12th Annual IEEE Symposium on Field-Programmable Custom Computing Machines, 2004. FCCM 2004., Vol. 0 (23 April 2004), pp. 197-206. by N. Azizi, I. Kuon, A. Egier, A. Darabiha, P. Chow posted to on md fpga by anallam on 2009-11-17 05:26:22 as along with 3 people and 1 group gferencz adilson_mohr gantlord rit_ee732
	Introduction. Biomolecular simulation [My Copy] Journal of The Royal Society Interface, Vol. 5, No. Suppl 3. (6 December 2008), pp. 169-172. by Adrian J. Mulholland posted to no-tag by anallam on 2009-11-15 23:56:10 as
	Quantum Simulations of Complex Many-Body Systems: From Theory to Algorithms, Lecture Notes [My Copy] Vol. 10 (2002), pp. 211-254. by J. Grotendorst, D. Marx edited by A. Muramatsu posted to no-tag by anallam on 2009-11-15 18:08:31 as
	An Application Specific Memory Characterization Technique for Co-processor Accelerators [My Copy] Application -specific Systems, Architectures and Processors, 2007. ASAP. IEEE International Conf. on (03 March 2008), pp. 353-358. by S. R. Alam, J. S. Vetter, M. C. Smith posted to no-tag by anallam on 2009-11-11 04:17:14 as
	Computer Architecture and parallel processing [My Copy] In Computer Architecture and parallel processing (1984) by Hwang Kai, Bridge A. Faye edited by Munson M. Eric, Palace Jonathan posted to computer architecture by anallam on 2009-11-05 00:22:52 as
	Parallel Processing in a Restructurable Computer System [My Copy] Electronic Computers, IEEE Transactions on, Vol. EC-12, No. 6. (26 December 2006), pp. 747-755. by G. Estrin, B. Bussell, R. Turn, J. Bibb posted to no-tag by anallam on 2009-11-02 17:34:09 as
	Accelerating molecular dynamics simulations with configurable circuits [My Copy] International Conference on Field Programmable Logic and Applications In Field Programmable Logic and Applications, 2005. International Conference on, Vol. 0 (2005), pp. 475-480. by Null Y. Gu, T. VanCourt, M. C. Herbordt posted to no-tag by anallam on 2009-10-30 19:42:22 as along with 2 people and 1 group gferencz adilson_mohr rit_ee732
	Particle-Mesh Ewald and rRESPA for Parallel Molecular Dynamics Simulations [My Copy] In In Proceedings of the Eighth SIAM Conference on Parallel Processing for Scientific Computing (1997) by Steve Plimpton, Roy Pollock, Mark Stevens posted to no-tag by anallam on 2009-09-24 20:45:04 as
	Accelerating Molecular Dynamics Simulations with Reconfigurable Computers [My Copy] Parallel and Distributed Systems, IEEE Transactions on In Parallel and Distributed Systems, IEEE Transactions on, Vol. 19, No. 6. (2008), pp. 764-778. by R. Scrofano, M. B. Gokhale, F. Trouw, V. K. Prasanna posted to no-tag by anallam on 2009-07-29 17:59:04 as along with 4 people and 1 group aso6678 gferencz mmuecke adilson_mohr rit_ee732
	Computing Lennard-Jones Potentials and Forceswith Reconfigurable Hardware [My Copy] by Ronald Scrofano, Viktor K. Prasanna posted to dynamics molecular root square supercomputing by anallam on 2009-07-28 18:54:28 as
	High Performance Molecular Dynamics Simulationswith FPGA Coprocessors [My Copy] RSSI (2007) by Yongfeng Gu, Martin C. Herbordt posted to no-tag by anallam on 2009-07-28 18:50:03 as
	Using FPGA Devices to Accelerate Biomolecular Simulations [My Copy] Computer In Computer, Vol. 40, No. 3. (2007), pp. 66-73. by S. R. Alam, P. K. Agarwal, M. C. Smith, J. S. Vetter, D. Caliga posted to amber src6 by anallam on 2009-07-27 19:26:46 as along with 7 people and 1 group gferencz aso6678 hamish peskin smithmc mmuecke adilson_mohr rit_ee732
	A case study in porting a production scientific supercomputing application to a reconfigurable computer [My Copy] In FCCM '06: Proceedings of the 14th Annual IEEE Symposium on Field-Programmable Custom Computing Machines (2006), pp. 13-22. by Volodymyr Kindratenko, David Pointer posted to namd src6 by anallam on 2009-07-27 18:06:12 as