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	Computational reconstruction of protein-protein interaction networks: algorithms and issues. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 541 (2009), pp. 89-100. by E. Franzosa, B. Linghu, Y. Xia posted to ppi reconstruction by anf on 2009-06-28 10:13:10 as along with 1 person chica
	Detecting reliable gene interactions by a hierarchy of Bayesian network classifiers. [My Copy] Computer methods and programs in biomedicine, Vol. 91, No. 2. (August 2008), pp. 110-121. by R. Armañanzas, I. Inza, P. Larrañaga posted to reliability ppi by anf on 2009-09-07 10:24:26 as along with 1 person guhjy
	Precision and recall estimates for two-hybrid screens. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 3. (1 February 2009), pp. 372-378. by Hailiang Huang, Joel S. Bader posted to ppi reliability by anf on 2009-07-02 15:18:03 as along with 8 people guhjy mariap3636 roys phoenixzxl mstumpf tmmurali sjcockell grahamc
	Training set expansion: an approach to improving the reconstruction of biological networks from limited and uneven reliable interactions [My Copy] Bioinformatics, Vol. 25, No. 2. (15 January 2009), pp. 243-250. by Kevin Y. Yip, Mark Gerstein posted to ppi reconstruction by anf on 2009-06-28 10:16:54 as along with 6 people ptrobajo guhjy mstumpf imina grahamc kgutwin
	Combining multiple positive training sets to generate confidence scores for protein-protein interactions. [My Copy] Bioinformatics (Oxford, England) (14 November 2008) by Jingkai Yu, Russell L L. Finley posted to integration ppi reliability by anf on 2009-06-28 09:54:44 as along with 2 people cerca grahamc
	PRINCESS, a Protein Interaction Confidence Evaluation System with Multiple Data Sources [My Copy] Mol Cell Proteomics, Vol. 7, No. 6. (1 June 2008), pp. 1043-1052. by Dong Li, Wanlin Liu, Zhongyang Liu, et al.Jian Wang, Qijun Liu, Yunping Zhu, Fuchu He posted to ppi reliability by anf on 2009-06-28 09:49:42 as along with 4 people carlk guhjy kluck phoenixzxl
	Assessing reliability of protein-protein interactions by integrative analysis of data in model organisms. [My Copy] BMC bioinformatics, Vol. 10 Suppl 4 (2009) by Xiaotong Lin, Mei Liu, Xue-wen W. Chen posted to ppi reliability by anf on 2009-06-28 09:44:01 as along with 2 people guhjy grahamc
	Assessing and combining reliability of protein interaction sources. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2007), pp. 433-444. by Sonia Leach, Aaron Gabow, Lawrence Hunter, Debra S. Goldberg posted to ppi reliability by anf on 2009-06-28 09:42:54 as along with 2 people carlk tmmurali
	Increasing the reliability of protein interactomes. [My Copy] Drug discovery today (30 June 2008) by Hon Nian N. Chua, Limsoon Wong posted to ppi reliability by anf on 2009-06-28 09:41:51 as along with 3 people marck guhjy zimbo1
	Bioconductor: open software development for computational biology and bioinformatics. [My Copy] Genome biology, Vol. 5, No. 10. (2004), R80. by Robert C. Gentleman, Vincent J. Carey, Douglas M. Bates, et al.Ben Bolstad, Marcel Dettling, Sandrine Dudoit, Byron Ellis, Laurent Gautier, Yongchao Ge, Jeff Gentry, Kurt Hornik, Torsten Hothorn, Wolfgang Huber, Stefano Iacus, Rafael Irizarry, Friedrich Leisch, Cheng Li, Martin Maechler, Anthony J. Rossini, Gunther Sawitzki, Colin Smith, Gordon Smyth, Luke Tierney, Jean Y. Yang, Jianhua Zhang posted to bioconductor by anf on 2009-06-28 08:40:35 as along with 25 people and 1 group shikin schwalb mqbphcw3 isimpson sebastien_vigneau najwvandijk coela YukaH daforerog czeller gupton Dax42 pcahan1 balajis dullhunk giovanni incovoma talponer medha1 wirawan joule zhouyu bertelsen sanchezbuelna bakakaj GeschwindLab
	A Complex-based Reconstruction of the Saccharomyces cerevisiae Interactome [My Copy] Mol Cell Proteomics, Vol. 8, No. 6. (1 June 2009), pp. 1361-1381. by Haidong Wang, Boyko Kakaradov, Sean R. Collins, et al.Lena Karotki, Dorothea Fiedler, Michael Shales, Kevan M. Shokat, Tobias C. Walther, Nevan J. Krogan, Daphne Koller posted to reconstruction by anf on 2009-08-27 10:45:42 as along with 2 people carlk ptrobajo
	Construction of reliable protein-protein interaction networks with a new interaction generality measure. [My Copy] Bioinformatics, Vol. 19, No. 6. (12 April 2003), pp. 756-763. by R. Saito, H. Suzuki, Y. Hayashizaki posted to ppi reconstruction by anf on 2009-06-28 10:19:31 as along with 3 people bluto ethkim cerca
	Supervised reconstruction of biological networks with local models [My Copy] Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. i57-65. by Kevin Bleakley, Gerard Biau, Jean-Philippe Vert posted to ppi reconstruction by anf on 2009-06-28 10:14:31 as along with 3 people seb1 ptrobajo shigepong
	An experimentally derived confidence score for binary protein-protein interactions [My Copy] Nat Meth, Vol. 6, No. 1. (07 December 2008), pp. 91-97. by Pascal Braun, Murat Tasan, Matija Dreze, et al.Miriam Barrios-Rodiles, Irma Lemmens, Haiyuan Yu, Julie M. Sahalie, Ryan R. Murray, Luba Roncari, Anne-Sophie de Smet, Kavitha Venkatesan, Jean-Francois Rual, Jean Vandenhaute, Michael E. Cusick, Tony Pawson, David E. Hill, Jan Tavernier, Jeffrey L. Wrana, Frederick P. Roth, Marc Vidal posted to ppi reliability by anf on 2009-06-28 09:48:42 as along with 7 people aceol lawraga carlk ocs zwang guhjy sjcockell
	Assessment of the reliability of protein-protein interactions and protein function prediction. [My Copy] Pac Symp Biocomput (2003), pp. 140-151. by M. Deng, F. Sun, T. Chen posted to ppi reliability by anf on 2009-06-28 09:44:59 as along with 2 people tmmurali gurkanbebek
	Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package annotationTools [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Alexandre Kuhn, Ruth L. Carter, Mauro Delorenzi posted to bioconductor by anf on 2009-06-28 10:33:21 as along with 13 people natstreet druvus guhjy jfr balicea dullhunk ghattem RamuAnandakrishnan heliopais ablejec zhouyu bertelsen sanchezbuelna
	Greedily building protein networks with confidence. [My Copy] Bioinformatics, Vol. 19, No. 15. (12 October 2003), pp. 1869-1874. by J. S. Bader posted to ppi reliability by anf on 2009-06-28 09:53:32 as along with 2 people iris_2001 carlk
	Increasing confidence of protein-protein interactomes. [My Copy] Genome Inform, Vol. 17, No. 2. (2006), pp. 284-297. by J. Chen, H. N. Chua, W. Hsu, et al.M. L. Lee, S. K. Ng, R. Saito, W. K. Sung, L. Wong posted to ppi reliability by anf on 2009-06-28 09:52:22 as along with 1 person bootsy
	A direct comparison of protein interaction confidence assignment schemes [My Copy] BMC Bioinformatics, Vol. 7 (26 July 2006), 360. by Silpa Suthram, Tomer Shlomi, Eytan Ruppin, Roded Sharan, Trey Ideker posted to ppi reliability by anf on 2009-06-28 09:51:35 as along with 7 people and 1 group roys tmmurali lfriedl balajis gurkanbebek IbnBio iris_2001 kdl
	Gaining confidence in high-throughput protein interaction networks. [My Copy] Nature biotechnology, Vol. 22, No. 1. (January 2004), pp. 78-85. by Joel S. Bader, Amitabha Chaudhuri, Jonathan M. Rothberg, John Chant posted to ppi reliability by anf on 2009-06-28 09:51:08 as along with 17 people and 1 group aceol carlk chica dakelley lawraga wenhui ocs dragonrez lfriedl gurkanbebek raiyar cjeans iris_2001 patrycjam patrycja_missiuro Evangelia ellakat kdl
	STRING 7--recent developments in the integration and prediction of protein interactions. [My Copy] Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007) by C. von Mering, L. J. Jensen, M. Kuhn, et al.S. Chaffron, T. Doerks, B. Krüger, B. Snel, P. Bork posted to integration ppi prediction by anf on 2009-06-28 09:38:56 as along with 16 people dragonrez druvus Cortel wenhui chad_davis guhjy kuhn balajis fisherp raiyar massivemayhem larsjuhljensen higueruelo renatomilani carlk bicko
	DASMIweb: online integration, analysis and assessment of distributed protein interaction data [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W122-128. by Hagen Blankenburg, Fidel Ramirez, Joachim Buch, Mario Albrecht posted to assessment integration ppi by anf on 2009-06-28 09:37:12 as along with 3 people yaredo guhjy grahamc
	Protein interactions: two methods for assessment of the reliability of high throughput observations. [My Copy] Molecular & cellular proteomics : MCP, Vol. 1, No. 5. (May 2002), pp. 349-356. by Charlotte M. Deane, Łukasz Salwiński, Ioannis Xenarios, David Eisenberg posted to assessment ppi by anf on 2009-06-28 09:32:35 as along with 16 people and 1 group chica lawraga jimineep lptolik zdai tmmurali lfriedl bluto henschel ruvido iris_2001 shikin cdeane Pao-Yang ras chasmand kdl
	Prediction of protein-protein interaction types using association rule based classification [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009) by Sung H. Park, Jose Reyes, David Gilbert, Ji W. Kim, Sangsoo Kim posted to ppi prediction by anf on 2009-06-28 09:22:22 as along with 4 people renatomilani grahamc higueruelo neils
	Random forest similarity for protein-protein interaction prediction from multiple sources. [My Copy] Pac Symp Biocomput (2005), pp. 531-542. by Y. Qi, J. Klein-Seetharaman, Z. Bar-Joseph posted to ppi prediction by anf on 2009-06-28 09:13:40 as along with 3 people and 1 group tmmurali okarsligil gurkanbebek Bioinformatics
	penalizedSVM: a R-package for feature selection SVM classification [My Copy] Bioinformatics, Vol. 25, No. 13. (1 July 2009), pp. 1711-1712. by Natalia Becker, Wiebke Werft, Grischa Toedt, Peter Lichter, Axel Benner posted to r svm by anf on 2009-06-28 09:08:26 as along with 11 people and 2 groups jfr sotacam ollieredfernwork rdiaz lwaldron dswan TRHvidsten neils operon phoenixzxl giovanni Orengo Group Journal Picks Bioinformatics
	CMA - A comprehensive Bioconductor package for supervised classification with high dimensional data [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Martin Slawski, Martin Daumer, Anne L. Boulesteix posted to bioconductor by anf on 2009-06-28 09:06:15 as along with 10 people and 1 group zufar Stew jfr akastrin rdiaz nuin guhjy druvus pengchy GeeSharpMinor Bioinformatics - CRUK
	A general pipeline for quality and statistical assessment of protein interaction data using R and Bioconductor. [My Copy] Nature protocols, Vol. 4, No. 4. (March 2009), pp. 535-546. by Tony Chiang, Denise Scholtens posted to bioconductor by anf on 2009-06-28 09:03:00 as along with 4 people guhjy winterschlaefer daforerog perlr