antonkratz's library 287 articles Export

	Coexpression network based on natural variation in human gene expression reveals gene interactions and functions [My Copy] Genome Research, Vol. 19, No. 11. (1 November 2009), pp. 1953-1962. by Renuka R. Nayak, Michael Kearns, Richard S. Spielman, Vivian G. Cheung posted to check_me_out by antonkratz on 2009-11-16 10:00:19 as along with 9 people and 1 group nsc129psu iskathy lp2 TRHvidsten megraw owhitney rdiaz tmmurali natstreet Journal picks
	Modulation of ADAR1 editing activity by Z-RNA in vitro [My Copy] Nucl. Acids Res., Vol. 33, No. 16. (21 September 2005), pp. 5362-5370. by Michael Koeris, Lars Funke, Jay Shrestha, Alexander Rich, Stefan Maas posted to z-dna by antonkratz on 2009-11-09 08:14:08 as
	Z-DNA-binding proteins can act as potent effectors of gene expression invivo [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 26. (24 December 2002), pp. 16666-16671. by Doo-Byoung Oh, Yang-Gyun Kim, Alexander Rich posted to z-dna by antonkratz on 2009-11-09 08:11:23 as
	DAI (DLM-1/ZBP1) is a cytosolic DNA sensor and an activator of innate immune response [My Copy] Nature, Vol. 448, No. 7152. (08 July 2007), pp. 501-505. by Akinori Takaoka, ZhiChao Wang, Myoung K. Choi, et al.Hideyuki Yanai, Hideo Negishi, Tatsuma Ban, Yan Lu, Makoto Miyagishi, Tatsuhiko Kodama, Kenya Honda, Yusuke Ohba, Tadatsugu Taniguchi posted to zbp1 z-dna by antonkratz on 2009-11-09 08:08:21 as along with 1 person Pezda
	All is not Toll: new pathways in DNA recognition [My Copy] J. Exp. Med., Vol. 203, No. 2. (21 February 2006), pp. 265-268. by Hermann Wagner, Stefan Bauer posted to z-dna by antonkratz on 2009-11-09 08:04:40 as
	Z-DNA-forming sequences generate large-scale deletions in mammalian cells [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 8. (21 February 2006), pp. 2677-2682. by Guliang Wang, Laura A. Christensen, Karen M. Vasquez posted to z-dna by antonkratz on 2009-11-09 08:03:35 as
	HIF-1 regulates heritable variation and allele expression phenotypes of the macrophage immune response gene SLC11A1 from a Z-DNA forming microsatellite [My Copy] Blood, Vol. 110, No. 8. (15 October 2007), pp. 3039-3048. by Henry K. Bayele, Carole Peyssonnaux, Alexandra Giatromanolaki, et al.Wagner W. Arrais-Silva, Hiba S. Mohamed, Helen Collins, Selma Giorgio, Michael Koukourakis, Randall S. Johnson, Jenefer M. Blackwell, Victor Nizet, Surjit K. Srai posted to z-dna by antonkratz on 2009-11-09 07:57:48 as along with 1 person emarker
	Cooperative Activity of BRG1 and Z-DNA Formation in Chromatin Remodeling [My Copy] Mol. Cell. Biol., Vol. 26, No. 7. (1 April 2006), pp. 2550-2559. by Hong Liu, Niveen Mulholland, Haiqing Fu, Keji Zhao posted to z-dna by antonkratz on 2009-11-09 07:56:22 as
	d(TG)nmiddle dotd(CA)n sequences upstream of the rat prolactin gene form Z-DNA and inhibit gene transcription [My Copy] Nucl. Acids Res., Vol. 18, No. 6. (25 March 1990), pp. 1595-1601. by Louise H. Naylor, Elizabeth M. Clark posted to z-dna by antonkratz on 2009-11-09 07:54:55 as
	Central dogma of molecular biology. [My Copy] Nature, Vol. 227, No. 5258. (8 August 1970), pp. 561-563. by F. Crick posted to thesis by antonkratz on 2009-11-08 08:02:59 as
	Cluster analysis and display of genome-wide expression patterns [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 95, No. 25. (8 December 1998), pp. 14863-14868. by Michael B. Eisen, Paul T. Spellman, Patrick O. Brown, David Botstein posted to grn_inference by antonkratz on 2009-11-06 08:19:47 as along with 34 people and 3 groups potatongy drungows colmryan jplatig rsaito Neeperando baldigroup daforerog karinlag ronglais operon Borelli pengchy macowell ggrot miguel textoris okarsligil pcahan1 lfriedl balajis nuke2005 lyongu maryee wnpx nirfriedman dquest karfunkel dps kintoki jo_davies tvdbulck bozdagd roys kdl Bioinformatics BUiGEM
	Inferring Alternative Splicing Patterns in Mouse from a Full-Length cDNA Library and Microarray Data [My Copy] Genome Research, Vol. 12, No. 8. (1 August 2002), pp. 1286-1293. by Hiromi Kochiwa, Ryosuke Suzuki, Takanori Washio, et al.Rintaro Saito, The R. I. K. E. N. Phase, Hidemasa Bono, Piero Carninci, Yasushi Okazaki, Rika Miki, Yoshihide Hayashizaki, Masaru Tomita posted to microarray by antonkratz on 2009-11-05 08:28:37 as
	Prediction of a crystallization pathway for Z-DNA hexanucleotides [My Copy] Science, Vol. 254, No. 5034. (15 November 1991), pp. 1003-1006. by P. S. Ho, T. F. Kagawa, K. H. Tseng, G. P. Schroth, G. W. Zhou posted to z-dna by antonkratz on 2009-11-03 11:41:02 as
	Theoretical prediction of base sequence effects in DNA. Experimental reactivity of Z-DNA and B-Z transition enthalpies. [My Copy] Journal of molecular biology, Vol. 207, No. 2. (20 May 1989), pp. 433-444. by B. Hartmann, B. Malfoy, R. Lavery posted to z-dna by antonkratz on 2009-11-03 11:38:36 as
	Novel multistranded, alternative, plasmid and helical transitional DNA and RNA microarrays: implications for therapeutics [My Copy] Pharmacogenomics, Vol. 10, No. 5., pp. 895-914. by Claude E. Gagna, W. Clark Lambert posted to z-dna drugdevelopment by antonkratz on 2009-11-03 10:58:46 as
	SOAP: short oligonucleotide alignment program [My Copy] Bioinformatics, Vol. 24, No. 5. (1 March 2008), pp. 713-714. by Ruiqiang Li, Yingrui Li, Karsten Kristiansen, Jun Wang posted to alignment by antonkratz on 2009-11-02 09:09:13 as along with 26 people cthachuk hzoltan adijr jmanning2k pachorip jmcq jsatkosk jasontsai n00c hpaces skembel maren natstreet druvus orzenil pengchy umit guhjy ghattem GustavoLacerda niallhaslam mdimon caseybrown urgi bozdagd waszak
	The automation of science. [My Copy] Science (New York, N.Y.), Vol. 324, No. 5923. (3 April 2009), pp. 85-89. by Ross D. King, Jem Rowland, Stephen G. Oliver, et al.Michael Young, Wayne Aubrey, Emma Byrne, Maria Liakata, Magdalena Markham, Pinar Pir, Larisa N. Soldatova, Andrew Sparkes, Kenneth E. Whelan, Amanda Clare posted to science2-0 by antonkratz on 2009-11-02 06:37:00 as along with 55 people and 2 groups Sergey_gerbek schwartzjmc yyfwuhan CulCog ckai1 jcaddy thegoose tommcdonagh tonamswish qwermish axeltan ocs TobiasAbenius CameronNeylon guhjy davidcsterratt bcondon Scis0000002 kevinemamy TRHvidsten emiko Zephyrus arne muraken vagoskar katiehumphry Effie robertknight acrmartins psique dbikard tyrell_turing Tomste renatomilani subhacom druvus ramanuja sen_cheng coela VGreiff hagechouchin443 Benja austin stober rdiaz Fortran napvasconcelos mikel_egana allysonlister dullhunk fgibson pkonings JeremyZucker jbhiatt tmmurali NaCTeM MetabolicModeling
	Characterization of DNA-binding activity of Zalpha domains from poxviruses and the importance of the -wing regions in converting B-DNA to Z-DNA [My Copy] Nucl. Acids Res., Vol. 35, No. 22. (3 December 2007), pp. 7714-7720. by Dong Van Quyen, Sung C. Ha, Ky Lowenhaupt, Alexander Rich, Kyeong K. Kim, Yang-Gyun Kim posted to z-dna virology by antonkratz on 2009-11-02 06:34:16 as
	Suppression of Proinflammatory Signal Transduction and Gene Expression by the Dual Nucleic Acid Binding Domains of the Vaccinia Virus E3L Proteins [My Copy] J. Virol., Vol. 80, No. 20. (15 October 2006), pp. 10083-10095. by Jeffrey O. Langland, John C. Kash, Victoria Carter, Matthew J. Thomas, Michael G. Katze, Bertram L. Jacobs posted to z-dna virology by antonkratz on 2009-11-02 06:31:54 as
	Identification of Novel Ligands for the Z-DNA Binding Protein by Structure-Based Virtual Screening [My Copy] Chemical & Pharmaceutical Bulletin, Vol. 55, No. 2. (2007), pp. 340-342. by Yang-Gyun Kim, Khac-Minh Thai, Jieun Song, Kyeong K. Kim, Hyun-Ju Park posted to z-dna virology by antonkratz on 2009-11-02 06:30:36 as
	Evidence that vaccinia virulence factor E3L binds to Z-DNA in vivo: Implications for development of a therapy for poxvirus infection [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 6. (10 February 2004), pp. 1514-1518. by Yang-Gyun Kim, Ky Lowenhaupt, Doo-Byoung Oh, Kyeong K. Kim, Alexander Rich posted to z-dna virology by antonkratz on 2009-11-02 06:26:42 as
	Mutational analysis of the vaccinia virus E3 protein defines amino acid residues involved in E3 binding to double-stranded RNA. [My Copy] Journal of virology, Vol. 70, No. 4. (April 1996), pp. 2611-2614. by C. K. Ho, S. Shuman posted to z-dna virology by antonkratz on 2009-11-02 06:25:37 as
	Comparative analyses of distributions and functions of Z-DNA in Arabidopsis and rice [My Copy] Genomics, Vol. 93, No. 4. (April 2009), pp. 383-391. by Chan Zhou, Fengfeng Zhou, Ying Xu posted to z-dna by antonkratz on 2009-11-02 05:28:04 as
	The crystal structure of the second Z-DNA binding domain of human DAI (ZBP1) in complex with Z-DNA reveals an unusual binding mode to Z-DNA [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 52. (30 December 2008), pp. 20671-20676. by Sung C. Ha, Doyoun Kim, Hye-Yeon Hwang, Alexander Rich, Yang-Gyun Kim, Kyeong K. Kim posted to zbp1 z-dna-binding-protein z-dna by antonkratz on 2009-11-02 05:14:46 as
	Phylogenomic analysis of the emergence of GC-rich transcription elements [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 42. (16 October 2007), pp. 16528-16533. by Patricia Khuu, Maurice Sandor, Jennifer DeYoung, P. Shing Ho posted to z-dna by antonkratz on 2009-11-02 05:04:13 as along with 1 person and 1 group dpollard EisenLab
	The Transition between the B and Z Conformations of DNA Investigated by Targeted Molecular Dynamics Simulations with Explicit Solvation [My Copy] Biophysical Journal, Vol. 91, No. 8. (15 October 2006), pp. 2976-2990. by M. Kastenholz, T. Schwartz, P. Hunenberger posted to z-dna by antonkratz on 2009-11-02 04:59:41 as
	Novel drug discovery and molecular biological methods, via DNA, RNA and protein changes using structure–function transitions: Transitional structural chemogenomics, transitional structural chemoproteomics and novel multi-stranded nucleic acid microarray [My Copy] Medical Hypotheses, Vol. 67, No. 5. (2006), pp. 1099-1114. by C. Gagna, W. Lambert posted to z-dna by antonkratz on 2009-11-02 04:53:12 as
	The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZalphaADAR1 [My Copy] Nucl. Acids Res., Vol. 37, No. 2. (1 February 2009), pp. 629-637. by Sung C. Ha, Jongkeun Choi, Hye-Yeon Hwang, Alexander Rich, Yang-Gyun Kim, Kyeong K. Kim posted to z-dna-binding-protein z-dna z-alpha by antonkratz on 2009-11-01 14:06:08 as
	Biochemical characterization and preliminary X-ray crystallographic study of the domains of human ZBP1 bound to left-handed Z-DNA [My Copy] Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics, Vol. 1764, No. 2. (February 2006), pp. 320-323. by S. Ha, D. Vanquyen, H. Hwang, et al.D. Oh, B. Brownii, S. Lee, H. Park, J. Ahn, K. Kim, Y. Kim posted to z-dna-binding-protein z-dna-alignment z-dna by antonkratz on 2009-11-01 14:02:30 as
	ZBP1 subcellular localization and association with stress granules is controlled by its Z-DNA binding domains [My Copy] Nucl. Acids Res., Vol. 34, No. 18. (6 October 2006), pp. 5007-5020. by Nikolaus Deigendesch, Friedrich Koch-Nolte, Stefan Rothenburg posted to z-dna-binding-protein z-dna z-alpha by antonkratz on 2009-11-01 12:13:48 as
	The Crystal Structure of the Zβ Domain of the RNA-editing Enzyme ADAR1 Reveals Distinct Conserved Surfaces Among Z-domains [My Copy] Journal of Molecular Biology, Vol. 351, No. 3. (19 August 2005), pp. 496-507. by Alekos Athanasiadis, Diana Placido, Stefan Maas, Bernard A. Brown II, Ky Lowenhaupt, Alexander Rich posted to z-dna-binding-protein z-dna z-alpha by antonkratz on 2009-11-01 12:00:54 as
	Crystal Structure of the Z Domain of the Human Editing Enzyme ADAR1 Bound to Left-Handed Z-DNA [My Copy] Science, Vol. 284, No. 5421. (11 June 1999), pp. 1841-1845. by Thomas Schwartz, Mark A. Rould, Ky Lowenhaupt, Alan Herbert, Alexander Rich posted to z-dna-binding-protein z-dna by antonkratz on 2009-10-31 15:04:01 as
	The Zalpha domain from human ADAR1 binds to the Z-DNA conformer of many different sequences [My Copy] Nucl. Acids Res., Vol. 26, No. 15. (1 August 1998), pp. 3486-3493. by A. Herbert, M. Schade, K. Lowenhaupt, et al.J. Alfken, T. Schwartz, L. S. Shlyakhtenko, Y. L. Lyubchenko, A. Rich posted to z-dna-binding-protein z-dna z-alpha by antonkratz on 2009-10-31 14:54:18 as
	Z-DNA, an active element in the genome. [My Copy] Frontiers in bioscience : a journal and virtual library, Vol. 12 (2007), pp. 4424-4438. by Guliang Wang, Karen M. Vasquez posted to z-dna by antonkratz on 2009-10-26 12:08:58 as
	Clickstream Data Yields High-Resolution Maps of Science [My Copy] PLoS ONE, Vol. 4, No. 3. (11 March 2009), e4803. by Johan Bollen, Herbert Van de Sompel, Aric Hagberg, et al.Luis Bettencourt, Ryan Chute, Marko A. Rodriguez, Lyudmila Balakireva posted to science2-0 by antonkratz on 2009-10-26 11:50:46 as along with 36 people and 6 groups daforerog mawds pansapiens CameronNeylon alhoori bcjordan cobi dullhunk carlblesius tfuji Scis0000002 jmchauvet markymaypo birukou nancydiana lmichan emayorga tnhh jago klamma yzhang hughesro idoerg OriginalLurch2 atphan rcrane Gaetan nojhan kh287 silberbauer psique fgibson druvus deanmalmgren ErikiLund stajich mgh-lcs hst-bmi ARTFL social_navigation Convention on Knowledge Commons Mycology
	Strategic Reading, Ontologies, and the Future of Scientific Publishing [My Copy] Science, Vol. 325, No. 5942. (14 August 2009), pp. 828-832. by Allen H. Renear, Carole L. Palmer posted to science2-0 by antonkratz on 2009-10-26 11:30:31 as along with 46 people and 9 groups cisevol aaltenburger radagabriel guhjy robertrentzsch artaban421 malkav30 conne262 clarabermudez jclau pick600 CulCog yuifu daforerog smuekusc robertlischke nperoni drevicko eisdur jago dayjm sebpaquet tnhh rickl Tomste fheintz reyez biologyeditors fgibson lmichan samjlord rdiaz polivares jandot dullhunk deanmalmgren druvus modza emptyhb plosmedicine renatomilani Zephyrus applebyb newtekken rschulz PaperCollector BergmanLab Semantic networks in translation Orengo Group Journal Picks Ubicomp STS Convention on Knowledge Commons Integrative Expertise for Global Health moernerlab Journal picks
	A technique for drawing directed graphs [My Copy] IEEE Transactions on Software Engineering, Vol. 19 (1993), pp. 214-230. by Emden R. Gansner, Eleftherios Koutsofios, Stephen C. North, Kiem-Phong Vo posted to genesis by antonkratz on 2009-10-26 06:18:38 as along with 1 person sgoetz
	Reverse engineering of gene regulatory networks: a finite state linear model [My Copy] Genome Biology, Vol. 4, No. 6. (2003), P5. by Alvis Brazma, Thomas Schlitt posted to grn by antonkratz on 2009-10-26 06:17:58 as
	Open MPI: Goals, Concept, and Design of a Next Generation MPI Implementation [My Copy] In Proceedings, 11th European PVM/MPI Users' Group Meeting (September 2004), pp. 97-104. by Edgar Gabriel, Graham E. Fagg, George Bosilca, et al.Thara Angskun, Jack J. Dongarra, Jeffrey M. Squyres, Vishal Sahay, Prabhanjan Kambadur, Brian Barrett, Andrew Lumsdaine, Ralph H. Castain, David J. Daniel, Richard L. Graham, Timothy S. Woodall posted to genesis by antonkratz on 2009-10-26 06:17:14 as along with 1 person coutinho
	A high-performance, portable implementation of the MPI message passing interface standard [My Copy] Parallel Computing, Vol. 22, No. 6. (September 1996), pp. 789-828. by W. Gropp posted to genesis by antonkratz on 2009-10-26 06:16:37 as
	MPI: A Message-Passing Interface Standard [My Copy] (1994) by Message Passing Interface Forum posted to genesis by antonkratz on 2009-10-26 06:16:04 as
	Users Guide to the PGAPack Parallel Genetic Algorithm Library [My Copy] (1996) by David Levine, Quick Start, I. Getting Started posted to genesis by antonkratz on 2009-10-26 06:15:14 as
	Gnu Scientific Library Reference Manual [My Copy] by Mark Galassi, Jim Davies, James Theiler, et al.Brian Gough, Gerard Jungman, Michael Booth, Fabrice Rossi posted to genesis by antonkratz on 2009-10-26 06:13:28 as
	Canalization, genetic assimilation and preadaptation. A quantitative genetic model. [My Copy] Genetics, Vol. 149, No. 4. (August 1998), pp. 2119-2133. by I. Eshel, C. Matessi posted to grn by antonkratz on 2009-10-26 06:10:48 as along with 2 people and 1 group rklancer cursonivel1 cursonivel1
	The Evolution of Canalization and the Breaking of Von Baer's Laws: Modeling the Evolution of Development with Epistasis [My Copy] Evolution, Vol. 52, No. 3. (1998), pp. 647-656. by Sean H. Rice posted to grn by antonkratz on 2009-10-26 06:10:05 as along with 3 people wilbur jjray shivakumar3_14
	Plasticity, evolvability, and modularity in RNA. [My Copy] J Exp Zool, Vol. 288, No. 3. (15 October 2000), pp. 242-283. by L. W. Ancel, W. Fontana posted to grn by antonkratz on 2009-10-26 06:09:50 as along with 2 people evaf amorgan
	A Population Genetic Theory of Canalization [My Copy] Evolution, Vol. 51, No. 2. (1997), pp. 329-347. by Gunter P. Wagner, Ginger Booth, Homayoun B. Chaichian posted to grn by antonkratz on 2009-10-26 06:09:31 as along with 1 person jjray
	Does Evolutionary Plasticity Evolve? [My Copy] Evolution, Vol. 50, No. 3. (1996), pp. 1008-1023. by Andreas Wagner posted to grn by antonkratz on 2009-10-26 06:07:45 as
	A Quantitative-Genetic Model for Selection on Developmental Noise [My Copy] Evolution, Vol. 48, No. 5. (1994), pp. 1478-1486. by Sergey Gavrilets, Alan Hastings posted to grn by antonkratz on 2009-10-26 06:07:06 as
	Evolutionary capacitance as a general feature of complex gene networks. [My Copy] Nature, Vol. 424, No. 6948. (31 July 2003), pp. 549-552. by Aviv Bergman, Mark L. Siegal posted to grn by antonkratz on 2009-10-26 06:04:29 as along with 7 people tictacgo semrich emptyhb hisashim cambray rklancer pat

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synthetic_biology	43
z-dna	39
grn	28
splicing	28
ncrna	18
paper	18
review	15
books	12
grn_inference	12
graph_theory	11
z-dna-binding-protein	11
check_me_out	7
gsea	7
minimal_genome	7
promoter	7
genesis	6
genome	5
pfam	5
science2-0	5
virology	5
alignment	4
bwt	4
collab	4
dream4	4
workflow	4
z-alpha	4
csf	3
exonic_promoter	3
genome_designing	3
ncrna_database	3
ppi	3
alternative_promoter	2
fantom3	2
fantom4	2
grn_model	2
intellectual_property	2
interdom	2
ivv	2
mysql	2
nucleosome_positioning	2
reproducibility	2
tata-box	2
thesis	2
zbp1	2
cuda	1
drugdevelopment	1
grn_evo	1
histones	1
hydroxyl_radical_cleavage	1
metagenomics	1
microarray	1
next_gen_sequencing	1
praxis	1
proteins	1
searchengine	1
sony_csl	1
thp-1	1
topology	1
z-dna-alignment	1

antonkratz's library 287 articles Export

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