antonkratz's z-dna [40 articles] Export

Recent papers added to antonkratz's library classified by the tag z-dna. You can also see everyone's z-dna.

	Regulation of CSF1 Promoter by the SWI/SNF-like BAF Complex [My Copy] Cell, Vol. 106, No. 3. (10 August 2001), pp. 309-318. by Rui Liu,, Hong Liu,, Xin Chen,, Martha Kirby,, Patrick .. Brown,, Keji Zhao, posted to z-dna by antonkratz on 2009-12-16 10:44:03 as
	Modulation of ADAR1 editing activity by Z-RNA in vitro [My Copy] Nucl. Acids Res., Vol. 33, No. 16. (21 September 2005), pp. 5362-5370. by Michael Koeris, Lars Funke, Jay Shrestha, Alexander Rich, Stefan Maas posted to z-dna by antonkratz on 2009-11-09 08:14:08 as
	Z-DNA-binding proteins can act as potent effectors of gene expression invivo [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 26. (24 December 2002), pp. 16666-16671. by Doo-Byoung Oh, Yang-Gyun Kim, Alexander Rich posted to z-dna by antonkratz on 2009-11-09 08:11:23 as
	DAI (DLM-1/ZBP1) is a cytosolic DNA sensor and an activator of innate immune response [My Copy] Nature, Vol. 448, No. 7152. (08 July 2007), pp. 501-505. by Akinori Takaoka, ZhiChao Wang, Myoung K. Choi, et al.Hideyuki Yanai, Hideo Negishi, Tatsuma Ban, Yan Lu, Makoto Miyagishi, Tatsuhiko Kodama, Kenya Honda, Yusuke Ohba, Tadatsugu Taniguchi posted to zbp1 z-dna by antonkratz on 2009-11-09 08:08:21 as along with 1 person Pezda
	All is not Toll: new pathways in DNA recognition [My Copy] J. Exp. Med., Vol. 203, No. 2. (21 February 2006), pp. 265-268. by Hermann Wagner, Stefan Bauer posted to z-dna by antonkratz on 2009-11-09 08:04:40 as
	Z-DNA-forming sequences generate large-scale deletions in mammalian cells [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 8. (21 February 2006), pp. 2677-2682. by Guliang Wang, Laura A. Christensen, Karen M. Vasquez posted to z-dna by antonkratz on 2009-11-09 08:03:35 as
	HIF-1 regulates heritable variation and allele expression phenotypes of the macrophage immune response gene SLC11A1 from a Z-DNA forming microsatellite [My Copy] Blood, Vol. 110, No. 8. (15 October 2007), pp. 3039-3048. by Henry K. Bayele, Carole Peyssonnaux, Alexandra Giatromanolaki, et al.Wagner W. Arrais-Silva, Hiba S. Mohamed, Helen Collins, Selma Giorgio, Michael Koukourakis, Randall S. Johnson, Jenefer M. Blackwell, Victor Nizet, Surjit K. Srai posted to z-dna by antonkratz on 2009-11-09 07:57:48 as along with 1 person emarker
	Cooperative Activity of BRG1 and Z-DNA Formation in Chromatin Remodeling [My Copy] Mol. Cell. Biol., Vol. 26, No. 7. (1 April 2006), pp. 2550-2559. by Hong Liu, Niveen Mulholland, Haiqing Fu, Keji Zhao posted to z-dna by antonkratz on 2009-11-09 07:56:22 as
	d(TG)n.d(CA)n sequences upstream of the rat prolactin gene form Z-DNA and inhibit gene transcription [My Copy] Nucl. Acids Res., Vol. 18, No. 6. (25 March 1990), pp. 1595-1601. by Louise H. Naylor, Elizabeth M. Clark posted to z-dna by antonkratz on 2009-11-09 07:54:55 as
	Prediction of a crystallization pathway for Z-DNA hexanucleotides [My Copy] Science, Vol. 254, No. 5034. (15 November 1991), pp. 1003-1006. by P. S. Ho, T. F. Kagawa, K. H. Tseng, G. P. Schroth, G. W. Zhou posted to z-dna by antonkratz on 2009-11-03 11:41:02 as
	Theoretical prediction of base sequence effects in DNA. Experimental reactivity of Z-DNA and B-Z transition enthalpies. [My Copy] Journal of molecular biology, Vol. 207, No. 2. (20 May 1989), pp. 433-444. by B. Hartmann, B. Malfoy, R. Lavery posted to z-dna by antonkratz on 2009-11-03 11:38:36 as
	Novel multistranded, alternative, plasmid and helical transitional DNA and RNA microarrays: implications for therapeutics [My Copy] Pharmacogenomics, Vol. 10, No. 5., pp. 895-914. by Claude E. Gagna, W. Clark Lambert posted to z-dna drugdevelopment by antonkratz on 2009-11-03 10:58:46 as
	Characterization of DNA-binding activity of Zalpha domains from poxviruses and the importance of the -wing regions in converting B-DNA to Z-DNA [My Copy] Nucl. Acids Res., Vol. 35, No. 22. (3 December 2007), pp. 7714-7720. by Dong Van Quyen, Sung C. Ha, Ky Lowenhaupt, Alexander Rich, Kyeong K. Kim, Yang-Gyun Kim posted to z-dna virology by antonkratz on 2009-11-02 06:34:16 as
	Suppression of Proinflammatory Signal Transduction and Gene Expression by the Dual Nucleic Acid Binding Domains of the Vaccinia Virus E3L Proteins [My Copy] J. Virol., Vol. 80, No. 20. (15 October 2006), pp. 10083-10095. by Jeffrey O. Langland, John C. Kash, Victoria Carter, Matthew J. Thomas, Michael G. Katze, Bertram L. Jacobs posted to z-dna virology by antonkratz on 2009-11-02 06:31:54 as
	Identification of Novel Ligands for the Z-DNA Binding Protein by Structure-Based Virtual Screening [My Copy] Chemical & Pharmaceutical Bulletin, Vol. 55, No. 2. (2007), pp. 340-342. by Yang-Gyun Kim, Khac-Minh Thai, Jieun Song, Kyeong K. Kim, Hyun-Ju Park posted to z-dna virology by antonkratz on 2009-11-02 06:30:36 as
	Evidence that vaccinia virulence factor E3L binds to Z-DNA in vivo: Implications for development of a therapy for poxvirus infection [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 6. (10 February 2004), pp. 1514-1518. by Yang-Gyun Kim, Ky Lowenhaupt, Doo-Byoung Oh, Kyeong K. Kim, Alexander Rich posted to z-dna virology by antonkratz on 2009-11-02 06:26:42 as
	Mutational analysis of the vaccinia virus E3 protein defines amino acid residues involved in E3 binding to double-stranded RNA. [My Copy] Journal of virology, Vol. 70, No. 4. (April 1996), pp. 2611-2614. by C. K. Ho, S. Shuman posted to z-dna virology by antonkratz on 2009-11-02 06:25:37 as
	Comparative analyses of distributions and functions of Z-DNA in Arabidopsis and rice [My Copy] Genomics, Vol. 93, No. 4. (April 2009), pp. 383-391. by Chan Zhou, Fengfeng Zhou, Ying Xu posted to z-dna by antonkratz on 2009-11-02 05:28:04 as
	The crystal structure of the second Z-DNA binding domain of human DAI (ZBP1) in complex with Z-DNA reveals an unusual binding mode to Z-DNA [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 52. (30 December 2008), pp. 20671-20676. by Sung C. Ha, Doyoun Kim, Hye-Yeon Hwang, Alexander Rich, Yang-Gyun Kim, Kyeong K. Kim posted to zbp1 z-dna-binding-protein z-dna by antonkratz on 2009-11-02 05:14:46 as
	Phylogenomic analysis of the emergence of GC-rich transcription elements [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 42. (16 October 2007), pp. 16528-16533. by Patricia Khuu, Maurice Sandor, Jennifer DeYoung, P. Shing Ho posted to z-dna by antonkratz on 2009-11-02 05:04:13 as along with 1 person and 1 group dpollard EisenLab
	The Transition between the B and Z Conformations of DNA Investigated by Targeted Molecular Dynamics Simulations with Explicit Solvation [My Copy] Biophysical Journal, Vol. 91, No. 8. (15 October 2006), pp. 2976-2990. by M. Kastenholz, T. Schwartz, P. Hunenberger posted to z-dna by antonkratz on 2009-11-02 04:59:41 as
	Novel drug discovery and molecular biological methods, via DNA, RNA and protein changes using structure–function transitions: Transitional structural chemogenomics, transitional structural chemoproteomics and novel multi-stranded nucleic acid microarray [My Copy] Medical Hypotheses, Vol. 67, No. 5. (2006), pp. 1099-1114. by C. Gagna, W. Lambert posted to z-dna by antonkratz on 2009-11-02 04:53:12 as
	The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZalphaADAR1 [My Copy] Nucl. Acids Res., Vol. 37, No. 2. (1 February 2009), pp. 629-637. by Sung C. Ha, Jongkeun Choi, Hye-Yeon Hwang, Alexander Rich, Yang-Gyun Kim, Kyeong K. Kim posted to z-dna-binding-protein z-dna z-alpha by antonkratz on 2009-11-01 14:06:08 as
	Biochemical characterization and preliminary X-ray crystallographic study of the domains of human ZBP1 bound to left-handed Z-DNA [My Copy] Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics, Vol. 1764, No. 2. (February 2006), pp. 320-323. by S. Ha, D. Vanquyen, H. Hwang, et al.D. Oh, B. Brownii, S. Lee, H. Park, J. Ahn, K. Kim, Y. Kim posted to z-dna-binding-protein z-dna-alignment z-dna by antonkratz on 2009-11-01 14:02:30 as
	ZBP1 subcellular localization and association with stress granules is controlled by its Z-DNA binding domains [My Copy] Nucl. Acids Res., Vol. 34, No. 18. (6 October 2006), pp. 5007-5020. by Nikolaus Deigendesch, Friedrich Koch-Nolte, Stefan Rothenburg posted to z-dna-binding-protein z-dna z-alpha by antonkratz on 2009-11-01 12:13:48 as
	The Crystal Structure of the Zβ Domain of the RNA-editing Enzyme ADAR1 Reveals Distinct Conserved Surfaces Among Z-domains [My Copy] Journal of Molecular Biology, Vol. 351, No. 3. (19 August 2005), pp. 496-507. by Alekos Athanasiadis, Diana Placido, Stefan Maas, Bernard A. Brown II, Ky Lowenhaupt, Alexander Rich posted to z-dna-binding-protein z-dna z-alpha by antonkratz on 2009-11-01 12:00:54 as
	Crystal Structure of the Z Domain of the Human Editing Enzyme ADAR1 Bound to Left-Handed Z-DNA [My Copy] Science, Vol. 284, No. 5421. (11 June 1999), pp. 1841-1845. by Thomas Schwartz, Mark A. Rould, Ky Lowenhaupt, Alan Herbert, Alexander Rich posted to z-dna-binding-protein z-dna by antonkratz on 2009-10-31 15:04:01 as
	The Zalpha domain from human ADAR1 binds to the Z-DNA conformer of many different sequences [My Copy] Nucl. Acids Res., Vol. 26, No. 15. (1 August 1998), pp. 3486-3493. by A. Herbert, M. Schade, K. Lowenhaupt, et al.J. Alfken, T. Schwartz, L. S. Shlyakhtenko, Y. L. Lyubchenko, A. Rich posted to z-dna-binding-protein z-dna z-alpha by antonkratz on 2009-10-31 14:54:18 as
	Z-DNA, an active element in the genome. [My Copy] Frontiers in bioscience : a journal and virtual library, Vol. 12 (2007), pp. 4424-4438. by Guliang Wang, Karen M. Vasquez posted to z-dna by antonkratz on 2009-10-26 12:08:58 as
	Cloning of DLM-1, a novel gene that is up-regulated in activated macrophages, using RNA differential display [My Copy] Gene, Vol. 240, No. 1. (15 November 1999), pp. 157-163. by Y. Fu posted to z-dna-binding-protein z-dna by antonkratz on 2009-10-25 06:45:23 as
	A Z-DNA binding domain present in the human editing enzyme, double-stranded RNA adenosine deaminase [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 94, No. 16. (5 August 1997), pp. 8421-8426. by Alan Herbert, Jens Alfken, Yang-Gyun Kim, I. Saira Mian, Kazuko Nishikura, Alexander Rich posted to z-dna-binding-protein z-dna by antonkratz on 2009-10-25 06:21:56 as
	Complex regulation of the human gene for the Z-DNA binding protein DLM-1 [My Copy] Nucl. Acids Res., Vol. 30, No. 4. (15 February 2002), pp. 993-1000. by Stefan Rothenburg, Thomas Schwartz, Friedrich Koch-Nolte, Friedrich Haag posted to z-dna-binding-protein z-dna by antonkratz on 2009-10-25 06:18:26 as
	Thermogenomics: Thermodynamic-based approaches to genomic analyses of DNA structure [My Copy] Methods, Vol. 47, No. 3. (March 2009), pp. 159-167. by P. Shing Ho posted to z-dna review by antonkratz on 2009-10-25 05:57:04 as
	What history tells us IX. Z-DNA: when nature is not opportunistic [My Copy] Journal of Biosciences, Vol. 32, No. 4. (1 June 2007), pp. 657-661. by Michel Morange posted to z-dna review by antonkratz on 2009-10-25 05:55:57 as
	Local DNA topography correlates with functional noncoding regions of the human genome. [My Copy] Science (New York, N.Y.), Vol. 324, No. 5925. (17 April 2009), pp. 389-392. by Stephen C. Parker, Loren Hansen, Hatice Ozel O. Abaan, Thomas D. Tullius, Elliott H. Margulies posted to z-dna by antonkratz on 2009-10-18 06:55:42 as along with 40 people and 6 groups provero rsaito daveGerrard operon sujaikumar pradiptaray roys gjuggler benjaminsb gdb hagechouchin443 tomtullius scjparker psique orzenil emptyhb ilyashl coela VGreiff APRegier myzhang pkonings akundaje athma absterga rpatward timflutre stajich bpcusack jbhiatt djkt dhlbh friendpine dpollard inesdesantiago JustinCrocker aprasad maximilianh idonaldson kshundyak BergmanLab Mycology structural_bioinformatics RockmanLab EisenLab cis-regulatory-evolution
	Human genomic Z-DNA segments probed by the Zalpha domain of ADAR1 [My Copy] Nucl. Acids Res., Vol. 37, No. 8. (1 May 2009), pp. 2737-2746. by Heng Li, Jie Xiao, Jinming Li, Le Lu, Shu Feng, Peter Droge posted to z-dna-binding-protein z-dna by antonkratz on 2009-10-16 05:15:08 as
	Detecting Z-DNA Forming Regions in the Human Genome [My Copy] by Jie Xiao, Peter Dröge, Jinming Li posted to z-dna by antonkratz on 2009-10-16 04:16:18 as
	Distributions of Z-DNA and nuclear factor I in human chromosome 22: a model for coupled transcriptional regulation [My Copy] Nucl. Acids Res., Vol. 32, No. 22. (14 December 2004), pp. 6501-6510. by P. Christoph Champ, Sandor Maurice, Jeffrey M. Vargason, Tracy Camp, P. Shing Ho posted to z-dna by antonkratz on 2009-10-15 18:31:18 as
	Z-DNA: the long road to biological function [My Copy] Nature Reviews Genetics, Vol. 4, No. 7. (01 July 2003), pp. 566-572. by Alexander Rich, Shuguang Zhang posted to z-dna review by antonkratz on 2009-10-15 18:30:22 as along with 1 person GX
	Mapping Z-DNA in the human genome. Computer-aided mapping reveals a nonrandom distribution of potential Z-DNA-forming sequences in human genes. [My Copy] Journal of Biological Chemistry, Vol. 267, No. 17. (15 June 1992), pp. 11846-11855. by G. P. Schroth, P. J. Chou, P. S. Ho posted to z-dna by antonkratz on 2009-10-15 18:29:39 as

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synthetic_biology	47
grn	40
z-dna	40
splicing	28
ncrna	18
paper	18
review	17
books	15
thesis	14
grn_inference	13
z-dna-binding-protein	11
graph_theory	11
grn_topology	7
promoter	7
science2-0	7
minimal_genome	7
grn_model	6
genesis	6
check_me_out	6
gsea	6
virology	5
pfam	5
genome	5
alignment	4
dream4	4
z-alpha	4
collab	4
bwt	4
workflow	4
genome_designing	3
drugdevelopment	3
csf	3
exonic_promoter	3
ncrna_database	3
ppi	3
reproducibility	2
zbp1	2
intellectual_property	2
fantom4	2
ivv	2
pre-mrna_processing	2
alternative_promoter	2
nucleosome_positioning	2
mysql	2
tata-box	2
interdom	2
fantom3	2
hydroxyl_radical_cleavage	1
z-dna-alignment	1
thp-1	1
proteins	1
grn_evo	1
searchengine	1
metagenomics	1
microarray	1
topology	1
histones	1
cuda	1
next_gen_sequencing	1
sony_csl	1

antonkratz's z-dna [40 articles] Export

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