CiteULike: apaydin's phi_value_analysis [13 articles]

Phi-Value analysis of a three-state protein folding pathway by NMR relaxation dispersion spectroscopy

Proceedings of the National Academy of Sciences, Vol. 104, No. 40. (2 October 2007), pp. 15717-15722.

by Philipp Neudecker, Arash Zarrine-Afsar, Alan R. Davidson, Lewis E. Kay

posted to analysis nmr phi phi_value_analysis sh3 value by apaydin on 2007-10-24 17:12:45 as

along with 1 person rph

Common Motifs and Topological Effects in the Protein Folding Transition State

Journal of Molecular Biology, Vol. 359, No. 4. (16 June 2006), pp. 1075-1085.

by Isaac A. Hubner, Magnus Lindberg, Ellinor Haglund, Mikael Oliveberg, Eugene I. Shakhnovich

posted to folding molecular_dynamics pfold phi_value_analysis protein_dynamics protein_folding rate_determination rate_prediction transition_state_ensemble by apaydin on 2006-06-11 16:28:27 as

Folding nuclei in proteins.

FEBS Lett, Vol. 489, No. 2-3. (2 February 2001), pp. 113-118.

by O. V. Galzitskaya, D. N. Ivankov, A. V. Finkelstein

posted to go_model phi_value_analysis protein_folding rate_determination rate_prediction by apaydin on 2006-05-13 14:33:44 as

Phi-value analysis by molecular dynamics simulations of reversible folding.

Proc Natl Acad Sci U S A, Vol. 102, No. 3. (18 January 2005), pp. 628-633.

by G. Settanni, F. Rao, A. Caflisch

posted to molecular_dynamics phi_value_analysis protein_folding by apaydin on 2006-02-16 20:18:09 as read

along with 2 people allmensch ruvido

Studies of folding and misfolding using simplified models.

Current opinion in structural biology In Protein-nucleic acid interactions/Folding and binding - Wei Yang and Gregory D Van Dyne/Mikael Oliveberg and Eugene I Shakhnovich, Vol. 16, No. 1. (February 2006), pp. 79-85.

by N. V. Dokholyan

posted to go_model misfolding phi_value_analysis protein_folding unfolded_state by apaydin on 2006-02-14 20:15:40 as

along with 5 people flbarroso babakap allmensch choonpeng mtw

Characterizing transition states in protein folding: an essential step in the puzzle

Current Opinion in Structural Biology, Vol. 5, No. 1. (February 1995), pp. 79-84.

by Alan R. Fersht

posted to phi_value_analysis protein_folding rate_determination review by apaydin on 2006-01-07 13:32:02 as

protein unfolding with first

by Thorpe, Hespenheide

posted to phi_value_analysis protein_dynamics protein_folding by apaydin on 2006-01-03 20:56:51 as

Theoretical study of protein folding: outlining folding nuclei and estimation of protein folding rates

Journal of Physics: Condensed Matter, Vol. 17, No. 18. (2005), pp. S1539-S1551.

by O. V. Galzitskaya, S. O. Garbuzynskiy, A. V. Finkelstein

posted to phi_value_analysis protein_folding rate_determination by apaydin on 2006-01-03 17:27:41 as read

The family feud: do proteins with similar structures fold via the same pathway?

Curr Opin Struct Biol, Vol. 15, No. 1. (February 2005), pp. 42-49.

by A. Zarrine-Afsar, S. M. Larson, A. R. Davidson

posted to phi_value_analysis protein_folding review by apaydin on 2005-12-22 19:29:43 as

along with 1 person gbart

cm5_18_011.pdf (application/pdf Object)

posted to phi_value_analysis protein_folding rate_determination by apaydin on 2005-12-20 17:55:50 as

Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures.

Proc Natl Acad Sci U S A, Vol. 96, No. 20. (28 September 1999), pp. 11305-11310.

by E. Alm, D. Baker

posted to phi_value_analysis protein_folding rate_determination by apaydin on 2005-12-13 21:38:38 as read

Outlining folding nuclei in globular proteins.

J Mol Biol, Vol. 336, No. 2. (13 February 2004), pp. 509-525.

by S. O. Garbuzynskiy, A. V. Finkelstein, O. V. Galzitskaya

posted to go_model phi_value_analysis protein_folding rate_determination by apaydin on 2005-12-12 21:53:55 as read

along with 1 person choonpeng

Cooperativity in two-state protein folding kinetics -- Weikl et al. 13 (3): 822 -- Protein Science

posted to go_model phi_value_analysis protein_folding by apaydin on 2005-06-07 21:29:58 as

	Phi-Value analysis of a three-state protein folding pathway by NMR relaxation dispersion spectroscopy [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 40. (2 October 2007), pp. 15717-15722. by Philipp Neudecker, Arash Zarrine-Afsar, Alan R. Davidson, Lewis E. Kay posted to analysis nmr phi phi_value_analysis sh3 value by apaydin on 2007-10-24 17:12:45 as along with 1 person rph
	Common Motifs and Topological Effects in the Protein Folding Transition State [My Copy] Journal of Molecular Biology, Vol. 359, No. 4. (16 June 2006), pp. 1075-1085. by Isaac A. Hubner, Magnus Lindberg, Ellinor Haglund, Mikael Oliveberg, Eugene I. Shakhnovich posted to folding molecular_dynamics pfold phi_value_analysis protein_dynamics protein_folding rate_determination rate_prediction transition_state_ensemble by apaydin on 2006-06-11 16:28:27 as
	Folding nuclei in proteins. [My Copy] FEBS Lett, Vol. 489, No. 2-3. (2 February 2001), pp. 113-118. by O. V. Galzitskaya, D. N. Ivankov, A. V. Finkelstein posted to go_model phi_value_analysis protein_folding rate_determination rate_prediction by apaydin on 2006-05-13 14:33:44 as
	Phi-value analysis by molecular dynamics simulations of reversible folding. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 3. (18 January 2005), pp. 628-633. by G. Settanni, F. Rao, A. Caflisch posted to molecular_dynamics phi_value_analysis protein_folding by apaydin on 2006-02-16 20:18:09 as along with 2 people allmensch ruvido
	Studies of folding and misfolding using simplified models. [My Copy] Current opinion in structural biology In Protein-nucleic acid interactions/Folding and binding - Wei Yang and Gregory D Van Dyne/Mikael Oliveberg and Eugene I Shakhnovich, Vol. 16, No. 1. (February 2006), pp. 79-85. by N. V. Dokholyan posted to go_model misfolding phi_value_analysis protein_folding unfolded_state by apaydin on 2006-02-14 20:15:40 as along with 5 people flbarroso babakap allmensch choonpeng mtw
	Characterizing transition states in protein folding: an essential step in the puzzle [My Copy] Current Opinion in Structural Biology, Vol. 5, No. 1. (February 1995), pp. 79-84. by Alan R. Fersht posted to phi_value_analysis protein_folding rate_determination review by apaydin on 2006-01-07 13:32:02 as
	protein unfolding with first [My Copy] by Thorpe, Hespenheide posted to phi_value_analysis protein_dynamics protein_folding by apaydin on 2006-01-03 20:56:51 as
	Theoretical study of protein folding: outlining folding nuclei and estimation of protein folding rates [My Copy] Journal of Physics: Condensed Matter, Vol. 17, No. 18. (2005), pp. S1539-S1551. by O. V. Galzitskaya, S. O. Garbuzynskiy, A. V. Finkelstein posted to phi_value_analysis protein_folding rate_determination by apaydin on 2006-01-03 17:27:41 as
	The family feud: do proteins with similar structures fold via the same pathway? [My Copy] Curr Opin Struct Biol, Vol. 15, No. 1. (February 2005), pp. 42-49. by A. Zarrine-Afsar, S. M. Larson, A. R. Davidson posted to phi_value_analysis protein_folding review by apaydin on 2005-12-22 19:29:43 as along with 1 person gbart
	cm5_18_011.pdf (application/pdf Object) [My Copy] posted to phi_value_analysis protein_folding rate_determination by apaydin on 2005-12-20 17:55:50 as
	Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures. [My Copy] Proc Natl Acad Sci U S A, Vol. 96, No. 20. (28 September 1999), pp. 11305-11310. by E. Alm, D. Baker posted to phi_value_analysis protein_folding rate_determination by apaydin on 2005-12-13 21:38:38 as
	Outlining folding nuclei in globular proteins. [My Copy] J Mol Biol, Vol. 336, No. 2. (13 February 2004), pp. 509-525. by S. O. Garbuzynskiy, A. V. Finkelstein, O. V. Galzitskaya posted to go_model phi_value_analysis protein_folding rate_determination by apaydin on 2005-12-12 21:53:55 as along with 1 person choonpeng
	Cooperativity in two-state protein folding kinetics -- Weikl et al. 13 (3): 822 -- Protein Science [My Copy] posted to go_model phi_value_analysis protein_folding by apaydin on 2005-06-07 21:29:58 as

apaydin's phi_value_analysis [13 articles] Export

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