apocapoc's library 129 articles Export

	Clustering Phase Transitions and Hysteresis: Pitfalls in Constructing Network Ensembles [My Copy] (11 Nov 2009) by David V. Foster, Jacob G. Foster, Maya Paczuski, Peter Grassberger posted to networks network_sampling by apocapoc on 2009-11-12 03:54:30 as
	Foundations of Societal Inequality [My Copy] Science, Vol. 326, No. 5953. (30 October 2009), pp. 678-679. by Daron Acemoglu, James Robinson posted to social_dynamics by apocapoc on 2009-11-07 14:59:53 as along with 2 people and 2 groups tustudium jago Participatory_Methods_for_Development Convention on Knowledge Commons
	Arithmetic simplicity beneath metabolic network architecture [My Copy] (26 Oct 2009) by W. J. Riehl, P. L. Krapivsky, S. Redner, D. Segre posted to metabolism_evolution metabolism metabolic_kinetics by apocapoc on 2009-10-27 13:25:15 as
	Investigating the robustness of the classical enzyme kinetic equations in small intracellular compartments [My Copy] (23 Oct 2009) by Ramon Grima posted to metabolism metabolic_kinetics by apocapoc on 2009-10-26 13:07:12 as along with 1 person jjray
	Fluctuations in Gene Regulatory Networks as Gaussian Colored Noise [My Copy] (23 Oct 2009) by Ming-Chang Huang, Jinn-Wen Wu, Yu-Pin Luo, Karen G. Petrosyan posted to network_dynamics gene_regulation by apocapoc on 2009-10-26 13:06:11 as along with 1 person jjray
	Efficient exploration of energy landscapes [My Copy] (14 Oct 2009) by Martin Mann, Konstantin Klemm posted to statistical_mechanics by apocapoc on 2009-10-24 22:12:11 as along with 1 person Diego_Prada
	Application of the Information Criterion to the Estimation of Galaxy Luminosity Function [My Copy] (19 Sep 1999) by Tsutomu T. Takeuchi posted to model_selection by apocapoc on 2009-10-22 21:21:13 as along with 1 person brian
	How many cosmological parameters? [My Copy] Monthly Notices of the Royal Astronomical Society, Vol. 351, No. 3. (2004), pp. L49-L53. by Andrew R. Liddle posted to model_selection by apocapoc on 2009-10-22 21:20:31 as
	Sparse essential interactions in model networks of gene regulation [My Copy] (21 Oct 2009) by Z. Burda, A. Krzywicki, O. C. Martin, M. Zagorski posted to regulatory_network by apocapoc on 2009-10-22 13:41:13 as
	Has the world economy reached its globalization limit? [My Copy] (19 Oct 2009) by Janusz Miskiewicz, Marcel Ausloos posted to economic_networks by apocapoc on 2009-10-21 13:31:31 as along with 1 person jriglesias
	Evolutionary constraints permeate large metabolic networks [My Copy] BMC Evolutionary Biology, Vol. 9, No. 1. (2009), 231. by Andreas Wagner posted to metabolism evolution by apocapoc on 2009-10-19 14:29:31 as along with 1 person idoerg
	How to understand the cell by breaking it: network analysis of gene perturbation screens [My Copy] (15 Oct 2009) by Florian Markowetz posted to network_inference gene_regulation by apocapoc on 2009-10-19 14:28:15 as
	Entropy measures for complex networks: Toward an information theory of complex topologies [My Copy] (16 Oct 2009) by Kartik Anand, Ginestra Bianconi posted to networks network_sampling inference by apocapoc on 2009-10-19 14:27:00 as along with 2 people mjb marinari
	Optimal cytoplasmatic density and flux balance model under macromolecular crowding effects [My Copy] (11 Oct 2009) by Alexei Vazquez posted to metabolic_kinetics by apocapoc on 2009-10-13 14:19:59 as along with 1 person jjray
	Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima [My Copy] Science, Vol. 325, No. 5947. (18 September 2009), pp. 1544-1549. by Ying Zhang, Ines Thiele, Dana Weekes, et al.Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley M. Deacon, John Wooley, Scott A. Lesley, Ian A. Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik posted to metabolism metabolic_kinetics by apocapoc on 2009-10-09 17:33:24 as along with 13 people michaelbarton venancio schwartzjmc eehsanipour riffraff reyez TRHvidsten flbarroso daveGerrard zwang pablocarb phoenixzxl roys
	Strong Inference: Certain systematic methods of scientific thinking may produce much more rapid progress than others. [My Copy] Science (New York, N.Y.), Vol. 146, No. 3642. (16 October 1964), pp. 347-353. by John R. Platt posted to inference by apocapoc on 2009-10-09 17:31:33 as along with 3 people samjlord jjray gareth
	Genomic analysis reveals a tight link between transcription factor dynamics and regulatory network architecture [My Copy] Molecular Systems Biology, Vol. 5 (18 August 2009) by Raja Jothi, S. Balaji, Arthur Wuster, et al.Joshua A. Grochow, Jorg Gsponer, Teresa M. Przytycka, L. Aravind, Madan M. Babu posted to regulatory_network by apocapoc on 2009-10-09 17:28:28 as along with 12 people ashishanand brianb dswan sjcockell zwang fenghezi rdiaz megraw poirel TRHvidsten jjray biomcgary
	Molecular networks as sensors and drivers of common human diseases [My Copy] Nature, Vol. 461, No. 7261. (09 September 2009), pp. 218-223. by Eric E. Schadt posted to diseasome by apocapoc on 2009-10-09 17:26:59 as along with 14 people robfree ptrobajo MurphysLab biomcgary greg inesdesantiago pablocarb brianb abhishek_tiwari zufar pkonings rdiaz daforerog megraw
	Inferring friendship network structure by using mobile phone data [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 36. (8 September 2009), pp. 15274-15278. by Nathan Eagle, Alex S. Pentland, David Lazer posted to social_networks by apocapoc on 2009-10-09 17:25:47 as along with 11 people and 1 group jltoole kohei-h isp davidecellai senseable-urb jsaramak lfriedl applebyb mboehmer irinas tnhh crawdad
	The Multi-Network of International Trade: A Commodity-Specific Analysis [My Copy] (6 Oct 2009) by Matteo Barigozzi, Giorgio Fagiolo, Diego Garlaschelli posted to economic_networks by apocapoc on 2009-10-07 13:54:39 as
	The performance of modularity maximization in practical contexts [My Copy] (1 Oct 2009) by Benjamin H. Good, Yves-Alexandre de Montjoye, Aaron Clauset posted to community_structure by apocapoc on 2009-10-02 13:47:56 as
	Emergent or Just Complex? [My Copy] Science, Vol. 325, No. 5948. (25 September 2009), pp. 1632-1634. by Anna C. Balazs, Irving R. Epstein posted to complexity by apocapoc on 2009-09-26 20:54:48 as along with 6 people and 1 group bertelsen MarioPaolucci rdiaz danilov baronka jjray LABSS
	A dynamic network approach for the study of human phenotypes [My Copy] (22 Sep 2009) by Cesar A. Hidalgo, Nicholas Blumm, Albert-Laszlo Barabasi, Nicholas Christakis posted to diseasome by apocapoc on 2009-09-23 17:07:41 as along with 3 people jfr pak marinari
	The Building Blocks of Economic Complexity [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 26. (22 Sep 2009), pp. 10570-10575. by Cesar A. Hidalgo, Ricardo Hausmann posted to economic_networks by apocapoc on 2009-09-23 17:07:14 as along with 5 people marinari dpf AbnerCYH deanmalmgren orahcio
	Estimation and Prediction for Stochastic Blockstructures. [My Copy] Journal of the American Statistical Association, Vol. 96, No. 455. (2001) by K. Nowicki, T. A. B. Snijders posted to blockmodels by apocapoc on 2009-09-18 19:46:47 as along with 1 person and 1 group hannu ThinkTank
	The Impact of Boundary Spanning Scholarly Publications and Patents [My Copy] PLoS ONE, Vol. 4, No. 8. (18 August 2009), e6547. by Xiaolin Shi, Lada A. Adamic, Belle L. Tseng, Gavin S. Clarkson posted to science_of_science by apocapoc on 2009-09-17 17:04:53 as along with 2 people elsantosneto ladamic
	On the relationship between interdisciplinarity and scientific impact [My Copy] (12 Aug 2009) by Vincent Lariviere, Yves Gingras posted to science_of_science by apocapoc on 2009-09-17 16:45:29 as along with 3 people deanmalmgren eisdur acrmartins
	Scaling laws of human interaction activity [My Copy] (10 Sep 2009) by Diego Rybski, Sergey V. Buldyrev, Shlomo Havlin, Fredrik Liljeros, Hernan A. Makse posted to social_dynamics by apocapoc on 2009-09-11 13:36:56 as along with 3 people marinari jsaramak acrmartins
	Economic Networks: What Do We Know and What Do We Need to Know? [My Copy] (September 2009) by Giorgio F. Frank Schweitzer posted to social_networks economic_networks by apocapoc on 2009-09-11 00:11:47 as
	Positive Interactions Promote Public Cooperation [My Copy] Science, Vol. 325, No. 5945. (4 September 2009), pp. 1272-1275. by David G. Rand, Anna Dreber, Tore Ellingsen, Drew Fudenberg, Martin A. Nowak posted to social_dynamics by apocapoc on 2009-09-11 00:08:39 as along with 9 people and 4 groups halukbingol biologyeditors ttaga hardin momo54 echi rpatward AJCann jago Soslab ecoo-ce Simulation of operations and interactions Participatory_Methods_for_Development
	On the Origin of Cooperation [My Copy] Science, Vol. 325, No. 5945. (4 September 2009), pp. 1196-1199. by Elizabeth Pennisi posted to social_dynamics by apocapoc on 2009-09-11 00:08:12 as along with 9 people and 3 groups halukbingol lafuente anarinsk farhat srijit acrmartins MarioPaolucci rdiaz jago Soslab LABSS Participatory_Methods_for_Development
	Early-warning signals for critical transitions [My Copy] Nature, Vol. 461, No. 7260. (03 September 2009), pp. 53-59. by Marten Scheffer, Jordi Bascompte, William A. Brock, et al.Victor Brovkin, Stephen R. Carpenter, Vasilis Dakos, Hermann Held, Egbert H. van Nes, Max Rietkerk, George Sugihara posted to complexity by apocapoc on 2009-09-10 14:00:37 as along with 18 people yyfwuhan nurban pablocarb kumar_physics vvoorr MurphysLab bertelsen diamantis yse danilov jjray kinestetika cermak ahuesler gi0rgi0ne bayesian pem cjryan
	Communities in Networks [My Copy] (9 Sep 2009) by Mason A. Porter, Jukka-Pekka Onnela, Peter J. Mucha posted to community_structure by apocapoc on 2009-09-10 13:58:10 as along with 11 people acrmartins Borelli rst macc lawraga akraemer dpf Bolozna deanmalmgren rrbarb vtraag
	Emergent Self-Organized Complex Network Topology out of Stability Constraints [My Copy] Physical Review Letters, Vol. 103, No. 10. (August 2009), 108701. by Juan I. Perotti, Orlando V. Billoni, Francisco A. Tamarit, Dante R. Chialvo, Sergio A. Cannas posted to networks by apocapoc on 2009-09-04 23:38:26 as along with 2 people vmarceau hendysh
	Complex brain networks: graph theoretical analysis of structural and functional systems. [My Copy] Nature reviews. Neuroscience, Vol. 10, No. 3. (4 March 2009), pp. 186-198. by Ed Bullmore, Olaf Sporns posted to neuroscience by apocapoc on 2009-09-03 18:23:00 as along with 22 people and 3 groups dawnsong winterstream mmwoodman isami jirak librain Scis0000002 flips jclau szielke pbellec viltrio prerona bsuter yonghe flieder sdaehne napvasconcelos chihchun_chen bayesian subhacom birdyyo resting-state_networks Complex_Brain_Networks Neuroscience
	FROM FACTORS TO ACTORS: Computational Sociology and Agent-Based Modeling [My Copy] Annual Review of Sociology, Vol. 28, No. 1. (2002), pp. 143-166. by Michael W. Macy, Robert Willer posted to agent_based_modeling by apocapoc on 2009-09-03 15:29:06 as along with 8 people and 1 group allyharp eegilbert frater klee0520 spool wentang qwermish gennaro LABSS
	Complex Contagions and the Weakness of Long Ties [My Copy] American Journal of Sociology, Vol. 113, No. 3. (1 November 2007), pp. 702-734. by Damon Centola, Michael Macy posted to social_networks social_dynamics by apocapoc on 2009-09-03 15:12:13 as along with 2 people spool davidecellai
	Dynamic Network Visualization [My Copy] American Journal of Sociology, Vol. 110, No. 4. (1 January 2005), pp. 1206-1241. by James Moody, Daniel Mcfarland, Skye Bender‐demoll posted to network_visualization by apocapoc on 2009-09-02 18:17:24 as along with 1 person vmarceau
	Rejection-free rule-based kinetic Monte Carlo simulation of multivalent ligand-receptor interactions [My Copy] (1 Sep 2009) by Jin Yang, William S. Hlavacek posted to monte_carlo kinetic_monte_carlo biomolecular_interactions by apocapoc on 2009-09-02 13:19:42 as along with 2 people jjray akraemer
	Network strategies to understand the aging process and help age-related drug design [My Copy] (31 Aug 2009) by Gabor I. Simko, David Gyurko, Daniel V. Veres, Tibor Nanasi, Peter Csermely posted to network_roles diseasome by apocapoc on 2009-09-02 13:10:16 as
	Edge Direction and the Structure of Networks [My Copy] (29 Aug 2009) by Jacob G. Foster, David V. Foster, Peter Grassberger, Maya Paczuski posted to networks by apocapoc on 2009-09-01 14:23:44 as along with 1 person marinari
	Supervised prediction of drug-target interactions using bipartite local models [My Copy] Bioinformatics, Vol. 25, No. 18. (15 September 2009), pp. 2397-2403. by Kevin Bleakley, Yoshihiro Yamanishi posted to network_inference diseasome by apocapoc on 2009-09-01 14:14:59 as along with 4 people mingzhi ptrobajo zwang phoenixzxl
	Effective and Efficient Similarity Index for Link Prediction of Complex Networks [My Copy] (26 Aug 2009) by Linyuan Lv, Ci-Hang Jin, Tao Zhou posted to network_reliability network_inference by apocapoc on 2009-08-27 14:47:33 as
	Designing optimal transport networks [My Copy] (26 Aug 2009) by G. Li, S. D. S. Reis, A. A. Moreira, S. Havlin, H. E. Stanley, J. S. Andrade posted to transportation_networks by apocapoc on 2009-08-27 14:45:16 as
	Cooperative Behaviour Cascades in Human Social Networks [My Copy] (24 Aug 2009) by James H. Fowler, Nicholas A. Christakis posted to social_networks social_dynamics by apocapoc on 2009-08-26 14:59:38 as
	Morphogenesis by coupled regulatory networks: Reliable control of positional information and proportion regulation [My Copy] Journal of Theoretical Biology (25 Aug 2009) by Thimo Rohlf, Stefan Bornholdt posted to morphogenesis gene_regulation by apocapoc on 2009-08-26 14:58:38 as along with 2 people sigoldberg1 jjray
	Building Disease-Specific Drug-Protein Connectivity Maps from Molecular Interaction Networks and PubMed Abstracts [My Copy] PLoS Comput Biol, Vol. 5, No. 7. (31 July 2009), e1000450. by Jiao Li, Xiaoyan Zhu, Jake Y. Chen posted to network_reliability network_inference diseasome by apocapoc on 2009-08-25 18:18:39 as along with 8 people and 2 groups bertelsen ptrobajo andrewclegg NickFurnham guhjy kshameer mingzhi frohike Journal picks Orengo Group Journal Picks
	Maps of random walks on complex networks reveal community structure [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 4. (29 January 2008), pp. 1118-1123. by Martin Rosvall, Carl T. Bergstrom posted to network_positions community_structure by apocapoc on 2009-08-25 17:50:54 as along with 22 people Borelli davidecellai jsaramak normaali daforerog Kovanen vtraag cgaugain yzhang haewoon lynnefox misc jonesn lfriedl stringertheory cjeans cactus hannu roys maralena Diego_Prada lmichan
	Standard Approaches to Network Structure: Block Modeling [My Copy] Structure in Complex Networks (2009), pp. 13-30. by J. Reichardt posted to network_roles community_structure blockmodels by apocapoc on 2009-08-19 21:36:22 as
	On the bias of traceroute sampling: Or, power-law degree distributions in regular graphs [My Copy] J. ACM, Vol. 56, No. 4. (2009), pp. 1-28. by Dimitris Achlioptas, Aaron Clauset, David Kempe, Cristopher Moore posted to network_sampling network_inference by apocapoc on 2009-08-19 18:10:35 as along with 1 person tnhh

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networks	29
community_structure	16
metabolism	14
social_dynamics	11
social_networks	10
metabolic_kinetics	7
science_of_science	7
diseasome	6
gene_regulation	6
network_inference	6
transportation_networks	5
complexity	4
economic_networks	4
network_dynamics	4
network_sampling	4
recommender_systems	4
blockmodels	2
ecology	2
energy_landscapes	2
evolution	2
fba	2
inference	2
model_selection	2
network_reliability	2
network_roles	2
neural_networks	2
protein_interaction_networks	2
regulatory_network	2
schizophrenia	2
statistical_mechanics	2
systems_biology	2
agent_based_modeling	1
biomolecular_interactions	1
cellular_networks	1
correlation_analysis	1
cultural_evolution	1
disease_spreading	1
evolution_of_cooperation	1
food_webs	1
hypergraphs	1
information	1
information_science	1
kinetic_monte_carlo	1
metabolism_evolution	1
monte_carlo	1
morphogenesis	1
navigability	1
network_positions	1
network_visualization	1
neuroscience	1
origin_of_life	1
politics	1
prediction	1
quantum_physics	1
stochastic_simulation	1

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