aprasad's comparative_genomics [44 articles] Export

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	Circos: An information aesthetic for comparative genomics [My Copy] Genome Research, Vol. 19, No. 9. (18 September 2009), pp. 1639-1645. by Martin Krzywinski, Jacqueline Schein, Ä°nanã§ Birol, et al.Joseph Connors, Randy Gascoyne, Doug Horsman, Steven J. Jones, Marco A. Marra posted to comparative_genomics tools visualization by aprasad on 2009-06-25 21:57:55 as along with 10 people and 1 group jmanning2k djkt rdiaz pkonings natstreet chrisamiller cisevol nuin idonaldson kshameer BergmanLab
	The role of phylogenetics in comparative genetics. [My Copy] Plant physiology, Vol. 132, No. 4. (August 2003), pp. 1790-1800. by D. E. Soltis, P. S. Soltis posted to comparative_genomics phylogenetics plants review by aprasad on 2009-06-24 02:35:46 as
	Population genomics of domestic and wild yeasts. [My Copy] Nature, Vol. 458, No. 7236. (19 March 2009), pp. 337-341. by G. Liti, D. M. Carter, A. M. Moses, et al.J. Warringer, L. Parts, S. A. James, R. P. Davey, I. N. Roberts, A. Burt, V. Koufopanou, I. J. Tsai, C. M. Bergman, D. Bensasson, M. J. O'Kelly, A. van Oudenaarden, D. B. Barton, E. Bailes, A. N. Nguyen, M. Jones, M. A. Quail, I. Goodhead, S. Sims, F. Smith, A. Blomberg, R. Durbin, E. J. Louis posted to comparative_genomics population_genetics yeast by aprasad on 2009-05-05 16:01:38 as along with 12 people and 3 groups michaelbarton emptyhb benjaminsb dpollard fungal absterga anphony druvus stajich jasontsai skoch3 dullhunk RockmanLab Mycology Koch_Lab
	Conserved noncoding sequences are reliable guides to regulatory elements [My Copy] Trends in Genetics, Vol. 16, No. 9. (1 September 2000), pp. 369-372. by Ross C. Hardison posted to cns comparative_genomics regulatory by aprasad on 2009-04-29 22:41:21 as along with 1 person brant
	Evolutionary conservation and selection of human disease gene orthologs in the rat and mouse genomes. [My Copy] Genome biology, Vol. 5, No. 7. (2004) by H. Huang, E. E. Winter, H. Wang, et al.K. G. Weinstock, H. Xing, L. Goodstadt, P. D. Stenson, D. N. Cooper, D. Smith, M. M. Albà, C. P. Ponting, K. Fechtel posted to comparative_genomics disease human human_genome selection by aprasad on 2009-03-13 22:16:58 as
	Comparative genomics and the study of evolution by natural selection [My Copy] Molecular Ecology, Vol. 17, No. 21. (November 2008), pp. 4586-4596. by H. A. N. S. Ellegren posted to comparative_genomics evolution phil review by aprasad on 2009-02-24 12:04:42 as along with 6 people jlin haloin jasontsai inquil natstreet druvus
	The effect of insertions and deletions on wirings in protein-protein interaction networks: a large-scale study. [My Copy] Journal of computational biology : a journal of computational molecular cell biology, Vol. 16, No. 2. (February 2009), pp. 159-167. by F. Hormozdiari, R. Salari, M. Hsing, et al.A. Schönhuth, S. K. Chan, S. C. Sahinalp, A. Cherkasov posted to coding comparative_genomics evolution indel protein by aprasad on 2009-02-17 15:00:44 as along with 1 person robfsouza
	Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome [My Copy] Genome Res., Vol. 17, No. 6. (1 June 2007), pp. 760-774. by Elliott H. Margulies, Gregory M. Cooper, George Asimenos, et al.Daryl J. Thomas, Colin N. Dewey, Adam Siepel, Ewan Birney, Damian Keefe, Ariel S. Schwartz, Minmei Hou, James Taylor, Sergey Nikolaev, Juan I. Montoya-Burgos, Ari Loytynoja, Simon Whelan, Fabio Pardi, Tim Massingham, James B. Brown, Peter Bickel, Ian Holmes, James C. Mullikin, Abel Ureta-Vidal, Benedict Paten, Eric A. Stone, Kate R. Rosenbloom, James W. Kent, Gerard G. Bouffard, Xiaobin Guan, Nancy F. Hansen, Jacquelyn R. Idol, Valerie V. Maduro, Baishali Maskeri, Jennifer C. Mcdowell, Morgan Park, Pamela J. Thomas, Alice C. Young, Robert W. Blakesley, Donna M. Muzny, Erica Sodergren, David A. Wheeler, Kim C. Worley, Huaiyang Jiang, George M. Weinstock, Richard A. Gibbs, Tina Graves, Robert Fulton, Elaine R. Mardis, Richard K. Wilson, Michele Clamp, James Cuff, Sante Gnerre, David B. Jaffe, Jean L. Chang, Kerstin Lindblad-Toh, Eric S. Lander, Angie Hinrichs, Heather Trumbower, Hiram Clawson, Ann Zweig, Robert M. Kuhn, Galt Barber, Rachel Harte, Donna Karolchik, Matthew A. Field, Richard A. Moore, Carrie A. Matthewson, Jacqueline E. Schein, Marco A. Marra, Stylianos E. Antonarakis, Serafim Batzoglou, Nick Goldman, Ross Hardison, David Haussler, Webb Miller, Lior Pachter, Eric D. Green, Arend Sidow posted to comparative_genomics conservation encode regulatory tfbs by aprasad on 2008-12-10 19:57:50 as along with 11 people and 5 groups daveGerrard polivares timflutre dpollard dchughes AaronDarling djkt ghattem Garamonfok gjuggler elfar BergmanLab Bioinformatics EisenLab G4ID Genetics-of-Gambling
	Identification of a coordinate regulator of interleukins 4, 13, and 5 by cross-species sequence comparisons. [My Copy] Science (New York, N.Y.), Vol. 288, No. 5463. (7 April 2000), pp. 136-140. by G. G. Loots, R. M. Locksley, C. M. Blankespoor, et al.Z. E. Wang, W. Miller, E. M. Rubin, K. A. Frazer posted to cns comparative_genomics mcs tfbs by aprasad on 2008-12-09 22:23:51 as
	Problems and solutions for estimating indel rates and length distributions. [My Copy] Molecular biology and evolution (28 November 2008) by Reed A A. Cartwright posted to comparative_genomics indel indel_rate by aprasad on 2008-12-08 20:22:40 as along with 2 people druvus nuin
	Comparative sequence analyses reveal sites of ancestral chromosomal fusions in the Indian muntjac genome [My Copy] Genome Biology, Vol. 9 (28 October 2008), R155. by Vicky Tsipouri, Mary G. Schueler, Sufen Hu, et al. Nisc, Amalia Dutra, Evgenia Pak, Harold Riethman, Eric D. Green posted to comparative_genomics muntjak nisc by aprasad on 2008-11-07 21:08:29 as along with 1 person djkt
	Analysis of Sequence Conservation at Nucleotide Resolution [My Copy] PLoS Computational Biology, Vol. 3, No. 12. (1 December 2007), e254. by Saurabh Asthana, Mikhail Roytberg, John Stamatoyannopoulos, Shamil Sunyaev posted to comparative_genomics conservation mcs methods by aprasad on 2008-05-13 15:42:29 as along with 4 people djkt GustavoLacerda nklee maximilianh
	28-Way vertebrate alignment and conservation track in the UCSC Genome Browser [My Copy] Genome Res. (5 November 2007), gr.6761107. by Webb Miller, Kate Rosenbloom, Ross C. Hardison, et al.Minmei Hou, James Taylor, Brian Raney, Richard Burhans, David C. King, Robert Baertsch, Daniel Blankenberg, Kosakovsky, Anton Nekrutenko, Belinda Giardine, Robert S. Harris, Svitlana Tyekucheva, Mark Diekhans, Thomas H. Pringle, William J. Murphy, Arthur Lesk, George M. Weinstock, Kerstin L. Toh, Richard A. Gibbs, Eric S. Lander, Adam Siepel, David Haussler, James W. Kent posted to alignment comparative_genomics ucsc by aprasad on 2007-12-11 14:46:01 as along with 11 people rschulz dchughes nklee maximilianh idonaldson fpattyn gjuggler clearbluespring joavah AaronDarling guhjy
	Designing and optimizing comparative anchor primers for comparative gene mapping and phylogenetic inference. [My Copy] Nat Protoc, Vol. 2, No. 11. (2007), pp. 3022-3030. by W. J. Murphy, S. J. O'Brien posted to comparative_genomics map methods primer tools by aprasad on 2007-11-26 15:09:24 as
	Remote control of gene expression. [My Copy] J Biol Chem, Vol. 282, No. 22. (1 June 2007), pp. 15941-15945. by X. Long, J. M. Miano posted to cns comparative_genomics regulatory by aprasad on 2007-08-13 16:33:48 as
	ExactPlus web interface [My Copy] by Arjun B. Prasad, Anthony Antonellis posted to cns comparative_genomics exactplus functional mcs regulatory signature by aprasad on 2007-08-06 22:22:03 as
	Cross-Species Sequence Comparisons: A Review of Methods and Available Resources [My Copy] Genome Research, Vol. 13, No. 1. (1 January 2003), pp. 1-12. by K. A. Frazer, L. Elnitski, D. M. Church, I. Dubchak, R. C. Hardison posted to cns comparative_genomics regulatory by aprasad on 2007-07-31 14:05:13 as along with 1 person stharward
	Conserved distances between vertebrate highly conserved elements. [My Copy] Hum Mol Genet (21 August 2006) by Hong Sun, Geir Skogerb√∏, Runsheng Chen posted to cns comparative_genomics regulatory spacing by aprasad on 2007-04-18 15:33:48 as along with 1 person and 1 group dpollard EisenLab
	Developments in CORG: a gene-centric comparative genomics resource. [My Copy] Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007) by C. Dieterich, M. W. Franz, M. Vingron posted to comparative_genomics non-coding regulatory tools by aprasad on 2007-02-12 18:01:55 as
	A computational genomics approach to identify cis-regulatory modules from chromatin immunoprecipitation microarray data--A case study using E2F1. [My Copy] Genome Res (19 October 2006) by Victor X. X. Jin, Alina Rabinovich, Sharon L. L. Squazzo, Roland Green, Peggy J. J. Farnham posted to regulatory enhancer comparative_genomics by aprasad on 2007-01-10 23:41:44 as along with 2 people jfr idonaldson
	Competition may determine the diversity of transposable elements [My Copy] Theoretical Population Biology, Vol. 70, No. 3. (November 2006), pp. 364-375. by Gyorgy Abrusan, Hans J. Krambeck posted to comparative_genomics genome_evolution repeats retrotransposon by aprasad on 2006-12-18 19:52:33 as along with 1 person timflutre
	Comprehensive splice-site analysis using comparative genomics. [My Copy] Nucleic acids research, Vol. 34, No. 14. (12 August 2006), pp. 3955-3967. by Nihar Sheth, Xavier Roca, Michelle L. L. Hastings, Ted Roeder, Adrian R. R. Krainer, Ravi Sachidanandam posted to comparative_genomics genomics splicing whole_genome by aprasad on 2006-10-20 14:45:24 as along with 6 people and 3 groups ongenetics thegoose2 tharris indigoviolet penka ankur_iitg C. elegans / WormBase EisenLab Nie
	Multiple sequence alignment accuracy and evolutionary distance estimation. [My Copy] BMC Bioinformatics, Vol. 6 (2005) by M. S. Rosenberg posted to alignment comparative_genomics evolution by aprasad on 2006-04-10 19:16:26 as along with 3 people and 2 groups treangen dpollard cisevol EisenLab cis-regulatory-evolution
	Galaxy: a platform for interactive large-scale genome analysis. [My Copy] Genome research, Vol. 15, No. 10. (October 2005), pp. 1451-1455. by B. Giardine, C. Riemer, R. C. Hardison, et al.R. Burhans, L. Elnitski, P. Shah, Y. Zhang, D. Blankenberg, I. Albert, J. Taylor, W. Miller, W. J. Kent, A. Nekrutenko posted to comparative_genomics galaxy genome tools by aprasad on 2006-04-10 19:16:08 as along with 9 people idoerg vijyendra antonkratz Thaverkamp ilyashl urgi rschulz daforerog guhjy
	Orthologs, paralogs, and evolutionary genomics. [My Copy] Annu Rev Genet, Vol. 39 (2005), pp. 309-338. by E. V. Koonin posted to comparative_genomics review by aprasad on 2006-04-10 17:44:01 as along with 7 people and 3 groups cmzmasek dchughes penka jdiezperezj fhsantanna BioNica cerca Nie G4ID Genetics-of-Gambling
	Comparative genomics. [My Copy] PLoS biology, Vol. 1, No. 2. (17 November 2003), e58. by R. C. Hardison posted to comparative_genomics genome_evolution review by aprasad on 2006-04-10 17:34:40 as along with 7 people and 1 group rshe roys katholt axelon beatrizfernandez nklee Neeperando Microbial-Ecology
	Deletion of long-range sequences at Sox10 compromises developmental expression in a mouse model of WaardenburgShah (WS4) syndrome [My Copy] Human Molecular Genetics, Vol. 15, No. 2. (15 January 2006), pp. 259-271. by Anthony Antonellis, William R. Bennett, Arjun B. Prasad, et al.Shih-Queen Lee-Lin, Eric D. Green, Derek Paisley, Robert N. Kelsh, William J. Pavan, Andrew Ward posted to cns comparative_genomics element enhancer exactplus functional regulatory signature by aprasad on 2006-03-31 22:29:05 as along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
	Multi-alignment of orthologous genome regions in five species provides new insights into the evolutionary make-up of mammalian genomes [My Copy] Chromosome Research, Vol. 13, No. 7. (October 2005), pp. 707-715. by Zhihua Jiang, Jennifer Michal, Jenna Melville, Heather Baltzer posted to comparative_genomics mammal map synteny by aprasad on 2006-02-13 21:00:21 as
	Short retroposons in eukaryotic genomes. [My Copy] International review of cytology, Vol. 247 (2005), pp. 165-221. by D. A. Kramerov, N. S. Vassetzky posted to comparative_genomics repeats retrotransposon review by aprasad on 2006-02-13 20:17:42 as along with 2 people and 2 groups timflutre dchughes G4ID Genetics-of-Gambling
	Mapping cis-regulatory domains in the human genome using multi-species conservation of synteny. [My Copy] Hum Mol Genet, Vol. 14, No. 20. (15 October 2005), pp. 3057-3063. by N. Ahituv, S. Prabhakar, F. Poulin, E. M. Rubin, O. Couronne posted to cns comparative_genomics element functional regulatory signal by aprasad on 2006-02-13 20:16:12 as along with 2 people ethkim maximilianh
	Initial sequence of the chimpanzee genome and comparison with the human genome. [My Copy] Nature, Vol. 437, No. 7055. (1 September 2005), pp. 69-87. by The C. Sequencing, Analysis Consortium posted to chimp comparative_genomics genome sequence whole_genome by aprasad on 2005-12-19 22:41:09 as along with 12 people and 3 groups rshe ThomasDOtto cannin chrn great_apes indigoviolet dullhunk djkt JeffR100 Garamonfok iris42 rvosa biodiversity_conservation EisenLab FAB-lab
	Genome sequence of the Brown Norway rat yields insights into mammalian evolution. [My Copy] Nature, Vol. 428, No. 6982. (1 April 2004), pp. 493-521. by R. A. Gibbs, G. M. Weinstock, M. L. Metzker, et al.D. M. Muzny, E. J. Sodergren, S. Scherer, G. Scott, D. Steffen, K. C. Worley, P. E. Burch, G. Okwuonu, S. Hines, L. Lewis, C. Deramo, O. Delgado, Dugan S. Rocha, G. Miner, M. Morgan, A. Hawes, R. Gill, Celera, R. A. Holt, M. D. Adams, P. G. Amanatides, Baden H. Tillson, M. Barnstead, S. Chin, C. A. Evans, S. Ferriera, C. Fosler, A. Glodek, Z. Gu, D. Jennings, C. L. Kraft, T. Nguyen, C. M. Pfannkoch, C. Sitter, G. G. Sutton, J. C. Venter, T. Woodage, D. Smith, H. M. Lee, E. Gustafson, P. Cahill, A. Kana, Doucette L. Stamm, K. Weinstock, K. Fechtel, R. B. Weiss, D. M. Dunn, E. D. Green, R. W. Blakesley, G. G. Bouffard, P. J. De Jong, K. Osoegawa, B. Zhu, M. Marra, J. Schein, I. Bosdet, C. Fjell, S. Jones, M. Krzywinski, C. Mathewson, A. Siddiqui, N. Wye, J. Mcpherson, S. Zhao, C. M. Fraser, J. Shetty, S. Shatsman, K. Geer, Y. Chen, S. Abramzon, W. C. Nierman, P. H. Havlak, R. Chen, K. J. Durbin, A. Egan, Y. Ren, X. Z. Song, B. Li, Y. Liu, X. Qin, S. Cawley, K. C. Worley, A. J. Cooney, L. M. D'Souza, K. Martin, J. Q. Wu, Gonzalez M. L. Garay, A. R. Jackson, K. J. Kalafus, M. P. Mcleod, A. Milosavljevic, D. Virk, A. Volkov, D. A. Wheeler, Z. Zhang, J. A. Bailey, E. E. Eichler, E. Tuzun, E. Birney, E. Mongin, Ureta A. Vidal, C. Woodwark, E. Zdobnov, P. Bork, M. Suyama, D. Torrents, M. Alexandersson, B. J. Trask, J. M. Young, H. Huang, H. Wang, H. Xing, S. Daniels, D. Gietzen, J. Schmidt, K. Stevens, U. Vitt, J. Wingrove, F. Camara, Mar M. Albà, J. F. Abril, R. Guigo, A. Smit, I. Dubchak, E. M. Rubin, O. Couronne, A. Poliakov, N. Hübner, D. Ganten, C. Goesele, O. Hummel, T. Kreitler, Y. A. Lee, J. Monti, H. Schulz, H. Zimdahl, H. Himmelbauer, H. Lehrach, H. J. Jacob, S. Bromberg, Gullings J. Handley, Jensen M. I. Seaman, A. E. Kwitek, J. Lazar, D. Pasko, P. J. Tonellato, S. Twigger, C. P. Ponting, J. M. Duarte, S. Rice, L. Goodstadt, S. A. Beatson, R. D. Emes, E. E. Winter, C. Webber, P. Brandt, G. Nyakatura, M. Adetobi, F. Chiaromonte, L. Elnitski, P. Eswara, R. C. Hardison, M. Hou, D. Kolbe, K. Makova, W. Miller, A. Nekrutenko, C. Riemer, S. Schwartz, J. Taylor, S. Yang, Y. Zhang, K. Lindpaintner, T. D. Andrews, M. Caccamo, M. Clamp, L. Clarke, V. Curwen, R. Durbin, E. Eyras, S. M. Searle, G. M. Cooper, S. Batzoglou, M. Brudno, A. Sidow, E. A. Stone, J. C. Venter, B. A. Payseur, G. Bourque, López C. Otín, X. S. Puente, K. Chakrabarti, S. Chatterji, C. Dewey, L. Pachter, N. Bray, V. B. Yap, A. Caspi, G. Tesler, P. A. Pevzner, D. Haussler, K. M. Roskin, R. Baertsch, H. Clawson, T. S. Furey, A. S. Hinrichs, D. Karolchik, W. J. Kent, K. R. Rosenbloom, H. Trumbower, M. Weirauch, D. N. Cooper, P. D. Stenson, B. Ma, M. Brent, M. Arumugam, D. Shteynberg, R. R. Copley, M. S. Taylor, H. Riethman, U. Mudunuri, J. Peterson, M. Guyer, A. Felsenfeld, S. Old, S. Mockrin, And F. Collins posted to comparative_genomics genome rat sequence whole_genome by aprasad on 2005-12-19 22:27:51 as along with 7 people and 4 groups taroleo gjuggler ccots rvosa dchughes djkt stajich FAB-lab G4ID Genetics-of-Gambling Mycology
	Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution [My Copy] Nature, Vol. 432, No. 7018. (9 December 2004), pp. 695-716. by L. W. Hillier, W. Miller, E. Birney, et al.W. Warren, R. C. Hardison, C. P. Ponting, P. Bork, D. W. Burt, M. A. Groenen, M. E. Delany, J. B. Dodgson, A. T. Chinwalla, P. F. Cliften, S. W. Clifton, K. D. Delehaunty, C. Fronick, R. S. Fulton, T. A. Graves, C. Kremitzki, D. Layman, V. Magrini, J. D. Mcpherson, T. L. Miner, P. Minx, W. E. Nash, M. N. Nhan, J. O. Nelson, L. G. Oddy, C. S. Pohl, Randall J. Maher, S. M. Smith, J. W. Wallis, S. P. Yang, M. N. Romanov, C. M. Rondelli, B. Paton, J. Smith, D. Morrice, L. Daniels, H. G. Tempest, L. Robertson, J. S. Masabanda, D. K. Griffin, A. Vignal, V. Fillon, L. Jacobbson, S. Kerje, L. Andersson, R. P. Crooijmans, J. Aerts, J. J. van der Poel, H. Ellegren, R. B. Caldwell, S. J. Hubbard, D. V. Grafham, A. M. Kierzek, S. R. Mclaren, I. M. Overton, H. Arakawa, K. J. Beattie, Y. Bezzubov, P. E. Boardman, J. K. Bonfield, M. D. Croning, R. M. Davies, M. D. Francis, S. J. Humphray, C. E. Scott, R. G. Taylor, C. Tickle, W. R. Brown, J. Rogers, J. M. Buerstedde, S. A. Wilson, L. Stubbs, I. Ovcharenko, L. Gordon, S. Lucas, M. M. Miller, H. Inoko, T. Shiina, J. Kaufman, J. Salomonsen, K. Skjoedt, G. K. Wong, J. Wang, B. Liu, J. Wang, J. Yu, H. Yang, M. Nefedov, M. Koriabine, P. J. Dejong, L. Goodstadt, C. Webber, N. J. Dickens, I. Letunic, M. Suyama, D. Torrents, C. von Mering, E. M. Zdobnov, K. Makova, A. Nekrutenko, L. Elnitski, P. Eswara, D. C. King, S. Yang, S. Tyekucheva, A. Radakrishnan, R. S. Harris, F. Chiaromonte, J. Taylor, J. He, M. Rijnkels, Griffiths S. Jones, Ureta A. Vidal, M. M. Hoffman, J. Severin, S. M. Searle, A. S. Law, D. Speed, D. Waddington, Z. Cheng, E. Tuzun, E. Eichler, Z. Bao, P. Flicek, D. D. Shteynberg, M. R. Brent, J. M. Bye, E. J. Huckle, S. Chatterji, C. Dewey, L. Pachter, A. Kouranov, Z. Mourelatos, A. G. Hatzigeorgiou, A. H. Paterson, R. Ivarie, M. Brandstrom, E. Axelsson, N. Backstrom, S. Berlin, M. T. Webster, O. Pourquie, A. Reymond, C. Ucla, S. E. Antonarakis, M. Long, J. J. Emerson, E. Betrán, I. Dupanloup, H. Kaessmann, A. S. Hinrichs, G. Bejerano, T. S. Furey, R. A. Harte, B. Raney, A. Siepel, W. J. Kent, D. Haussler, E. Eyras, R. Castelo, J. F. Abril, S. Castellano, F. Camara, G. Parra, R. Guigo, G. Bourque, G. Tesler, P. A. Pevzner, A. Smit, L. A. Fulton, E. R. Mardis, And R. K. Wilson posted to bird chicken comparative_genomics genome sequence whole_genome by aprasad on 2005-12-19 22:25:32 as along with 7 people and 4 groups gdb taroleo dchughes dullhunk harikrishna djkt jandot hst-bmi Bioinformatics G4ID Genetics-of-Gambling
	Initial sequencing and comparative analysis of the mouse genome. [My Copy] Nature, Vol. 420, No. 6915. (5 December 2002), pp. 520-562. by R. H. Waterston, Lindblad K. Toh, E. Birney, et al.J. Rogers, J. F. Abril, P. Agarwal, R. Agarwala, R. Ainscough, M. Alexandersson, P. An, S. E. Antonarakis, J. Attwood, R. Baertsch, J. Bailey, K. Barlow, S. Beck, E. Berry, B. Birren, T. Bloom, P. Bork, M. Botcherby, N. Bray, M. R. Brent, D. G. Brown, S. D. Brown, C. Bult, J. Burton, J. Butler, R. D. Campbell, P. Carninci, S. Cawley, F. Chiaromonte, A. T. Chinwalla, D. M. Church, M. Clamp, C. Clee, F. S. Collins, L. L. Cook, R. R. Copley, A. Coulson, O. Couronne, J. Cuff, V. Curwen, T. Cutts, M. Daly, R. David, J. Davies, K. D. Delehaunty, J. Deri, E. T. Dermitzakis, C. Dewey, N. J. Dickens, M. Diekhans, S. Dodge, I. Dubchak, D. M. Dunn, S. R. Eddy, L. Elnitski, R. D. Emes, P. Eswara, E. Eyras, A. Felsenfeld, G. A. Fewell, P. Flicek, K. Foley, W. N. Frankel, L. A. Fulton, R. S. Fulton, T. S. Furey, D. Gage, R. A. Gibbs, G. Glusman, S. Gnerre, N. Goldman, L. Goodstadt, D. Grafham, T. A. Graves, E. D. Green, S. Gregory, R. Guigó, M. Guyer, R. C. Hardison, D. Haussler, Y. Hayashizaki, L. W. Hillier, A. Hinrichs, W. Hlavina, T. Holzer, F. Hsu, A. Hua, T. Hubbard, A. Hunt, I. Jackson, D. B. Jaffe, L. S. Johnson, M. Jones, T. A. Jones, A. Joy, M. Kamal, E. K. Karlsson, D. Karolchik, A. Kasprzyk, J. Kawai, E. Keibler, C. Kells, W. J. Kent, A. Kirby, D. L. Kolbe, I. Korf, R. S. Kucherlapati, E. J. Kulbokas, D. Kulp, T. Landers, J. P. Leger, S. Leonard, I. Letunic, R. Levine, J. Li, M. Li, C. Lloyd, S. Lucas, B. Ma, D. R. Maglott, E. R. Mardis, L. Matthews, E. Mauceli, J. H. Mayer, M. Mccarthy, W. R. Mccombie, S. Mclaren, K. Mclay, J. D. Mcpherson, J. Meldrim, B. Meredith, J. P. Mesirov, W. Miller, T. L. Miner, E. Mongin, K. T. Montgomery, M. Morgan, R. Mott, J. C. Mullikin, D. M. Muzny, W. E. Nash, J. O. Nelson, M. N. Nhan, R. Nicol, Z. Ning, C. Nusbaum, M. J. O'Connor, Y. Okazaki, K. Oliver, Overton E. Larty, L. Pachter, G. Parra, K. H. Pepin, J. Peterson, P. Pevzner, R. Plumb, C. S. Pohl, A. Poliakov, T. C. Ponce, C. P. Ponting, S. Potter, M. Quail, A. Reymond, B. A. Roe, K. M. Roskin, E. M. Rubin, A. G. Rust, R. Santos, V. Sapojnikov, B. Schultz, J. Schultz, M. S. Schwartz, S. Schwartz, C. Scott, S. Seaman, S. Searle, T. Sharpe, A. Sheridan, R. Shownkeen, S. Sims, J. B. Singer, G. Slater, A. Smit, D. R. Smith, B. Spencer, A. Stabenau, Stange N. Thomann, C. Sugnet, M. Suyama, G. Tesler, J. Thompson, D. Torrents, E. Trevaskis, J. Tromp, C. Ucla, Ureta A. Vidal, J. P. Vinson, A. C. Von Niederhausern, C. M. Wade, M. Wall, R. J. Weber, R. B. Weiss, M. C. Wendl, A. P. West, K. Wetterstrand, R. Wheeler, S. Whelan, J. Wierzbowski, D. Willey, S. Williams, R. K. Wilson, E. Winter, K. C. Worley, D. Wyman, S. Yang, S. P. Yang, E. M. Zdobnov, M. C. Zody, And E. S. Lander posted to comparative_genomics genome mouse sequence whole_genome by aprasad on 2005-12-19 22:13:07 as along with 24 people and 2 groups rshe seb1 ajbattle jmanning2k timhubbard taroleo fisherp dkulp sdinka Cortel jwortman Dax42 ccots indigoviolet adepace treangen joshuashen djkt stajich olympos hausen yoanjacquemin elfar kevinemamy EisenLab Mycology
	Genome sequence, comparative analysis and haplotype structure of the domestic dog [My Copy] Nature, Vol. 438, No. 7069. (2005), pp. 803-819. by Kerstin L. Toh, Claire M. Wade, Tarjei S. Mikkelsen, et al.Elinor K. Karlsson, David B. Jaffe, Michael Kamal, Michele Clamp, Jean L. Chang, Edward J. Kulbokas, Michael C. Zody, Evan Mauceli, Xiaohui Xie, Matthew Breen, Robert K. Wayne, Elaine A. Ostrander, Chris P. Ponting, Francis Galibert, Douglas R. Smith, Pieter J. Dejong, Ewen Kirkness, Pablo Alvarez, Tara Biagi, William Brockman, Jonathan Butler, Chee W. Chin, April Cook, James Cuff, Mark J. Daly, David Decaprio, Sante Gnerre, Manfred Grabherr, Manolis Kellis, Michael Kleber, Carolyne Bardeleben, Leo Goodstadt, Andreas Heger, Christophe Hitte, Lisa Kim, Klaus P. Koepfli, Heidi G. Parker, John P. Pollinger, Stephen M. J. Searle, Nathan B. Sutter, Rachael Thomas, Caleb Webber, Eric S. Lander posted to comparative_genomics dog genome genome_size sequence whole_genome by aprasad on 2005-12-19 22:11:03 as along with 8 people and 7 groups taroleo kmegq melissa21 indigoviolet dchughes neveaire mini1000srule djkt Biostatistics Computational-Genomics Bioinformatics EisenLab Neuroscience G4ID Genetics-of-Gambling
	Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes. [My Copy] Genome Res, Vol. 15, No. 8. (August 2005), pp. 1034-1050. by A. Siepel, G. Bejerano, J. S. Pedersen, et al.A. S. Hinrichs, M. Hou, K. Rosenbloom, H. Clawson, J. Spieth, L. W. Hillier, S. Richards, G. M. Weinstock, R. K. Wilson, R. A. Gibbs, W. J. Kent, W. Miller, D. Haussler posted to cns comparative_genomics conservation evolution genome_evolution mutation_rate phastcons by aprasad on 2005-12-02 22:15:13 as along with 20 people and 4 groups thegoose2 farhat skembel alessandroparini tharris bpb balajis eckart_bindewald indigoviolet brant pradiptaray adepace djkt olympos sujaikumar Stew cisevol dmc elfar AlexanderPico C. elegans / WormBase EisenLab cis-regulatory-evolution ConklinLab
	TRADE-OFFS IN DETECTING EVOLUTIONARILY CONSTRAINED SEQUENCE BY COMPARATIVE GENOMICS [My Copy] Annual Review of Genomics and Human Genetics, Vol. 6, No. 1. (2005), pp. 143-164. by E. A. Stone, G. M. Cooper, A. Sidow posted to comparative_genomics element functional mcs by aprasad on 2005-11-01 21:27:37 as along with 4 people sujaikumar diamantis jwortman eckart_bindewald
	Discovery of regulatory elements in vertebrates through comparative genomics [My Copy] Nature Biotechnology, Vol. 23, No. 10. (06 October 2005), pp. 1249-1256. by Amol Prakash, Martin Tompa posted to comparative_genomics element regulatory by aprasad on 2005-11-01 21:21:01 as along with 3 people and 3 groups idonaldson indigoviolet dchughes EisenLab G4ID Genetics-of-Gambling
	Distribution and intensity of constraint in mammalian genomic sequence. [My Copy] Genome Res, Vol. 15, No. 7. (July 2005), pp. 901-913. by G. M. Cooper, E. A. Stone, G. Asimenos, E. D. Green, S. Batzoglou, A. Sidow posted to comparative_genomics evolution genome_evolution sequence by aprasad on 2005-09-20 19:42:46 as along with 6 people druvus operon nirfriedman JeffR100 Garamonfok tale
	Striking nucleotide frequency pattern at the borders of highly conserved vertebrate non-coding sequences. [My Copy] Trends Genet, Vol. 21, No. 8. (August 2005), pp. 436-440. by K. Walter, I. Abnizova, G. Elgar, W. R. Gilks posted to cns comparative_genomics genome motif mulliken by aprasad on 2005-08-25 16:48:08 as along with 2 people and 2 groups Stew cisevol EisenLab cis-regulatory-evolution
	Dcode.org anthology of comparative genomic tools. [My Copy] Nucleic Acids Res, Vol. 33, No. Web Server issue. (1 July 2005) by G. G. Loots, I. Ovcharenko posted to analysis comparative_genomics dcodeorg genomic tools web by aprasad on 2005-08-18 19:47:39 as along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
	Parallel construction of orthologous sequence-ready clone contig maps in multiple species. [My Copy] Genome Res, Vol. 12, No. 8. (August 2002), pp. 1277-1285. by J. W. Thomas, A. B. Prasad, T. J. Summers, et al.Lee S. Q. Lin, V. V. Maduro, J. R. Idol, J. F. Ryan, P. J. Thomas, J. C. Mcdowell, E. D. Green posted to bac bac_mapping comparative_genomics map nisc overgo physical soop zooseq by aprasad on 2005-08-08 22:09:03 as
	Detection of potential GDF6 regulatory elements by multispecies sequence comparisons and identification of a skeletal joint enhancer. [My Copy] Genomics (23 June 2005) by Matthew E. E. Portnoy, Kelly J. J. Mcdermott, Anthony Antonellis, et al.Elliott H. H. Margulies, Arjun B. B. Prasad, David M. M. Kingsley, Eric D. D. Green, Douglas P. P. Mortlock posted to comparative_genomics element enhancer exactplus gdf6 joint mcs regulatory by aprasad on 2005-08-08 22:06:43 as along with 1 person and 2 groups breden FAB-lab SFUAntibodyResearch
	Comparative analyses of multi-species sequences from targeted genomic regions [My Copy] Nature, Vol. 424, No. 6950. (14 August 2003), pp. 788-793. by J. W. Thomas, J. W. Touchman, R. W. Blakesley, et al.G. G. Bouffard, Beckstrom S. M. Sternberg, E. H. Margulies, M. Blanchette, A. C. Siepel, P. J. Thomas, J. C. Mcdowell, B. Maskeri, N. F. Hansen, M. S. Schwartz, R. J. Weber, W. J. Kent, D. Karolchik, T. C. Bruen, R. Bevan, D. J. Cutler, S. Schwartz, L. Elnitski, J. R. Idol, A. B. Prasad, Lee S. Q. Lin, V. V. Maduro, T. J. Summers, M. E. Portnoy, N. L. Dietrich, N. Akhter, K. Ayele, B. Benjamin, K. Cariaga, C. P. Brinkley, S. Y. Brooks, S. Granite, X. Guan, J. Gupta, P. Haghighi, S. L. Ho, M. C. Huang, E. Karlins, P. L. Laric, R. Legaspi, M. J. Lim, Q. L. Maduro, C. A. Masiello, S. D. Mastrian, J. C. Mccloskey, R. Pearson, S. Stantripop, E. E. Tiongson, J. T. Tran, C. Tsurgeon, J. L. Vogt, M. A. Walker, K. D. Wetherby, L. S. Wiggins, A. C. Young, L. H. Zhang, K. Osoegawa, B. Zhu, B. Zhao, C. L. Shu, P. J. De Jong, C. E. Lawrence, A. F. Smit, A. Chakravarti, D. Haussler, P. Green, W. Miller, E. D. Green posted to comparative_genomics mcs nature targeted_sequencing zooseq by aprasad on 2005-08-08 22:04:51 as along with 5 people and 1 group stharward pradiptaray radek adepace AaronDarling EisenLab

Note: You may cite this page as: http://www.citeulike.org/user/aprasad/tag/comparative_genomics

phylogenetics	249
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gene_deserts	1
gene_flow	1
genetic_code	1
genetic_disease	1
gene_tree	1
goldfish	1
hidden	1
histone	1
history	1
history-of-science	1
hky85	1
honeybee	1
horse	1
hplc	1
hubmed	1
human_microbiome	1
illumina	1
imprinting	1
inde_rate	1
jalview	1
kinship	1
lactase	1
lemur	1
linkage	1
longevity	1
mammalian	1
mcclintock	1
me	1
medicine	1
melan-a	1
metagenomics	1
metazoa	1
method	1
mixture_models	1
modeltest	1
molecular_biology	1
mom	1
mulliken	1
muntjak	1
nature	1
neandertal	1
nextgen_seq	1
nj	1
nomenclature	1
numts	1
nylon	1
opossum	1
orangutan	1
overdispersion	1
perissodactylas	1
phyml	1
physical	1
pig	1
platypus	1
primer	1
pseudogene	1
pubmed	1
r	1
recon	1
regulation	1
replication	1
reverse_genetics	1
sampling	1
search	1
seq-gen	1
shark	1
silkworm	1
single_gene	1
social_class	1
soop	1
spacing	1
strand	1
structure	1
supermatrix	1
systematic	1
systematic_bias	1
tag	1
tandem_duplications	1
tandem_repeats	1
targeted_sequencing	1
taxon_sampling	1
tetraodon	1
textbook	1
thomas	1
transcription	1
trees	1
tree_shrew	1
trophoblast	1
tuatara	1
upgma	1
uprobe	1
usage	1
visualization	1
web	1
wgs	1
whale	1
xenarthra	1

aprasad's comparative_genomics [44 articles] Export

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