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archroad's library [55 articles]

Recent papers added to archroad's library.
  • The hallmarks of cancer.
    Cell, Vol. 100, No. 1. (7 January 2000), pp. 57-70.
    by D Hanahan, RA Weinberg
    posted to no-tag by archroad on 2008-01-30 06:54:07 as ** along with 17 people gwenknight catcremona frohike rklancer jyuh kentsis Borelli jfr laurabailey iskanbasal mhucka holmesjo SeungjoonOh cerami tibbitts waghsk zebkhan
  • Comparative genomic hybridization for molecular cytogenetic analysis of solid tumors.
    Science, Vol. 258, No. 5083. (30 October 1992), pp. 818-821.
    by A Kallioniemi, OP Kallioniemi, D Sudar, D Rutovitz, JW Gray, F Waldman, D Pinkel
    posted to no-tag by archroad on 2008-01-15 06:02:23 as **
  • Matrix-based comparative genomic hybridization: Biochips to screen for genomic imbalances
    Genes, Chromosomes and Cancer, Vol. 20, No. 4. (1997), pp. 399-407.
    by Sabina Solinas-Toldo, Stefan Lampel, Stephan Stilgenbauer, Jeremy Nickolenko, Axel Benner, Hartmut Döhner, Thomas Cremer, Peter Lichter
    posted to no-tag by archroad on 2008-01-08 23:46:20 as **
  • The chromosome number of man.
    Am J Obstet Gynecol, Vol. 130, No. 6. (15 March 1978), pp. 723-724.
    by JH Tjio
    posted to no-tag by archroad on 2008-01-08 20:55:54 as **
  • Tumor classification using phylogenetic methods on expression data.
    J Theor Biol, Vol. 228, No. 4. (21 June 2004), pp. 477-496.
    by R Desper, J Khan, AA Schäffer
    posted to no-tag by archroad on 2007-12-07 19:09:30 as ** along with 1 person ccots
  • Fundamental Concepts of Bioinformatics
    (12 September 2002)
    by Dan E Krane, Michael L Raymer
    posted to no-tag by archroad on 2007-12-07 18:15:18 as **
  • Distance-based reconstruction of tree models for oncogenesis.
    J Comput Biol, Vol. 7, No. 6. (2000), pp. 789-803.
    by R Desper, F Jiang, OP Kallioniemi, H Moch, CH Papadimitriou, AA Schäffer
    posted to no-tag by archroad on 2007-12-07 03:39:36 as read
  • Genetic alterations during colorectal-tumor development.
    N Engl J Med, Vol. 319, No. 9. (1 September 1988), pp. 525-532.
    by B Vogelstein, ER Fearon, SR Hamilton, SE Kern, AC Preisinger, M Leppert, Y Nakamura, R White, AM Smits, JL Bos
    posted to no-tag by archroad on 2007-12-07 03:35:59 as ** along with 1 person jfr
  • Statistical Learning Theory
    (16 September 1998)
    by Vladimir N Vapnik
    posted to no-tag by archroad on 2007-11-30 02:54:46 as **** along with 12 people and 3 groups jaonary yaroslavvb gyuli grzegorz sdvillal paolo AbnerCYH abrentnall bundschu johnkork navil shimazaki Bioinformatics QFRMC_ConsumerCredit generif_paper
  • Minimum redundancy feature selection from microarray gene expression data.
    J Bioinform Comput Biol, Vol. 3, No. 2. (April 2005), pp. 185-205.
    by C Ding, H Peng
    posted to no-tag by archroad on 2007-11-30 02:40:15 as read along with 1 person chiahuey
  • Introduction to Data Mining, (First Edition)
    (02 May 2005)
    by Pang-Ning Tan, Michael Steinbach, Vipin Kumar
    posted to no-tag by archroad on 2007-11-29 23:00:27 as **** along with 6 people and 1 group ansobol ChaTo AbnerCYH imrchen cgarboni BelliOS CSBBGraphTheory
  • Ductal breast carcinoma develops through different patterns of chromosomal evolution
    Genes, Chromosomes and Cancer, Vol. 43, No. 2. (2005), pp. 147-154.
    by Romain Molist, Michele Gerbault-Seureau, Xavier Sastre-Garau, Brigitte Sigal-Zafrani, Bernard Dutrillaux, Martine Muleris
    posted to no-tag by archroad on 2007-10-25 16:33:17 as **
  • Genetic subtyping of renal cell carcinoma by comparative genomic hybridization.
    Recent Results Cancer Res, Vol. 162 (2003), pp. 169-175.
    by K Junker, G Weirich, MB Amin, P Moravek, W Hindermann, J Schubert
    posted to no-tag by archroad on 2007-10-25 16:31:54 as **
  • Chromosomal imbalances in gastric and esophageal adenocarcinoma: Specific comparative genomic hybridization-detected abnormalities segregate with junctional adenocarcinomas
    Genes, Chromosomes and Cancer, Vol. 32, No. 1. (2001), pp. 50-58.
    by Craig S Stocks, Norman Pratt, Mark Sales, David A Johnston, Alastair M Thompson, Francis A Carey, Neil M Kernohan
    posted to no-tag by archroad on 2007-10-25 16:30:43 as **
  • Different genetic pathways in the evolution of invasive breast cancer are associated with distinct morphological subtypes
    The Journal of Pathology, Vol. 189, No. 4. (1999), pp. 521-526.
    by Horst Buerger, Friedrich Otterbach, Ronald Simon, Karl-Ludwig Schäfer, Christopher Poremba, Raihanatou Diallo, Christian Brinkschmidt, Barbara Dockhorn-Dworniczak, Werner Boecker
    posted to no-tag by archroad on 2007-10-25 16:27:59 as **
  • Molecular cytogenetic analysis of a human breast metastasis model: identification of phenotype-specific chromosomal rearrangements.
    Cancer Genet Cytogenet, Vol. 156, No. 1. (1 January 2005), pp. 37-48.
    by S Goodison, C Viars, V Urquidi
    posted to no-tag by archroad on 2007-10-22 22:05:13 as **
  • Comprehensive karyotyping of the HT-29 colon adenocarcinoma cell line
    Genes, Chromosomes and Cancer, Vol. 34, No. 1. (2002), pp. 1-8.
    by Kanji Kawai, Carrie Viars, Karen Arden, David Tarin, Virginia Urquidi, Steve Goodison
    posted to no-tag by archroad on 2007-10-22 21:59:45 as **
  • An Introduction to Support Vector Machines and Other Kernel-based Learning Methods
    (23 March 2000)
    by Nello Cristianini, John Shawe-Taylor
    posted to no-tag by archroad on 2007-01-21 04:49:43 as ** along with 19 people and 6 groups quianominorleo yaroslavvb sb-3000 davidr baaic sleitich ryanshaw nello MatMay grzegorz buescher76 lyongu AbnerCYH brunomelo atbrew kklo mfcabrera asterix77 eacosta sims_phd_cohort_2005 digital_youth Computational-Genomics Pattern-Analysis AI RiSE
  • Feature selection for DNA methylation based cancer classification.
    Bioinformatics, Vol. 17 Suppl 1 (2001)
    by F Model, P Adorján, A Olek, C Piepenbrock
    posted to no-tag by archroad on 2007-01-18 03:59:27 as ** along with 1 person olympos
  • Multiclass cancer diagnosis using tumor gene expression signatures.
    Proc Natl Acad Sci U S A, Vol. 98, No. 26. (18 December 2001), pp. 15149-15154.
    by S Ramaswamy, P Tamayo, R Rifkin, S Mukherjee, CH Yeang, M Angelo, C Ladd, M Reich, E Latulippe, JP Mesirov, T Poggio, W Gerald, M Loda, ES Lander, TR Golub
    posted to no-tag by archroad on 2007-01-18 03:02:09 as ** along with 3 people and 1 group ggrot dragonrez giovanni GeschwindLab
  • Array comparative genomic hybridization and its applications in cancer.
    Nat Genet, Vol. 37 Suppl (June 2005)
    by D Pinkel, DG Albertson
    posted to no-tag by archroad on 2006-11-10 04:56:20 as ** along with 6 people and 3 groups textoris rfrousse pcahan1 rdiaz tvdbulck frohike Institut_Hemato_Oncologie_Pediatrique Neuroblastome_SFCE Bioinformatics
  • How many mutations are required for tumorigenesis? Implications from human cancer data.
    Mol Carcinog, Vol. 7, No. 3. (1993), pp. 139-146.
    by MJ Renan
    posted to no-tag by archroad on 2006-11-07 05:39:48 as **
  • Biomarker identification by feature wrappers.
    Genome Res, Vol. 11, No. 11. (November 2001), pp. 1878-1887.
    by M Xiong, X Fang, J Zhao
    posted to no-tag by archroad on 2006-10-02 03:46:11 as **
  • Molecular Classification of Cancer: Class Discovery and Class Prediction by Gene Expression Monitoring
    Science, Vol. 286, No. 5439. (15 October 1999), pp. 531-537.
    by T Golub, D Slonim, P Tamayo, C Huard, M Gaasenbeek, J Mesirov, H Coller, M Loh, J Downing, M Caligiuri, C Bloomfield, E Lander
    posted to no-tag by archroad on 2006-10-02 03:12:11 as ** along with 10 people and 1 group raiyar balajis sdvillal giovanni santhosh ugengma wtribbey jo_davies akastrin zchen GeschwindLab
  • Multiple SVM-RFE for gene selection in cancer classification with expression data.
    IEEE Trans Nanobioscience, Vol. 4, No. 3. (September 2005), pp. 228-234.
    by KB Duan, JC Rajapakse, H Wang, F Azuaje
    posted to no-tag by archroad on 2006-10-01 23:24:31 as read along with 1 person jianrong
  • A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis
    Bioinformatics, Vol. 21, No. 5. (01 March 2005), pp. 631-643.
    by Alexander Statnikov, Constantin F Aliferis, Ioannis Tsamardinos, Douglas Hardin, Shawn Levy
    posted to classification microarray by archroad on 2006-10-01 04:23:57 as read along with 6 people vmsr slevy03 kallberg srp33 chad_davis dimatura
  • Gene Selection for Cancer Classification using Support Vector Machines
    Machine Learning, Vol. 46, No. 1-3. (2002), pp. 389-422.
    by Isabelle Guyon, Jason Weston, Stephen Barnhill, Vladimir Vapnik
    posted to data gene microarray selection by archroad on 2006-09-05 18:21:26 as **** along with 4 people ujh gyuli chad_davis jianrong
  • A method for calling gains and losses in array CGH data.
    Biostatistics, Vol. 6, No. 1. (January 2005), pp. 45-58.
    by P Wang, Y Kim, J Pollack, B Narasimhan, R Tibshirani
    posted to segmentation tree by archroad on 2006-09-01 00:00:58 as read along with 2 people rdiaz OscarRueda
  • Cluster analysis for gene expression data: a survey
    Knowledge and Data Engineering, IEEE Transactions on, Vol. 16, No. 11. (2004), pp. 1370-1386.
    by Daxin Jiang, Chun Tang, Aidong Zhang
    posted to clustering gene microarray survey by archroad on 2006-08-31 23:45:05 as **** along with 4 people AbnerCYH burtonwu bayesian dps
  • Clustering microarray gene expression data using weighted Chinese restaurant process.
    Bioinformatics (9 June 2006)
    by Zhaohui Qin
    posted to clusering microarray by archroad on 2006-08-31 23:19:09 as **** along with 3 people jfr maryee bayes
  • Binary State Pattern Clustering: A Digital Paradigm for Class and Biomarker Discovery in Gene Microarray Studies of Cancer
    Journal of Computational Biology, Vol. 13, No. 5. (2006), pp. 1114-1130.
    by Bradley J Beattie, Peter N Robinson
    posted to clustering microarray by archroad on 2006-08-31 23:16:54 as read
  • Hidden Markov models approach to the analysis of array CGH data
    Journal of Multivariate Analysis, Vol. 90, No. 1. (July 2004), pp. 132-153.
    by Jane Fridlyand, Antoine M Snijders, Dan Pinkel, Donna G Albertson, Jain
    posted to cgh hmm segmentation by archroad on 2006-08-31 23:02:16 as read along with 2 people pcahan1 OscarRueda
  • Inferring tree models for oncogenesis from comparative genome hybridization data.
    J Comput Biol, Vol. 6, No. 1. (1999), pp. 37-51.
    by R Desper, F Jiang, OP Kallioniemi, H Moch, CH Papadimitriou, AA Schäffer
    posted to cgh model by archroad on 2006-08-28 21:21:59 as **** along with 1 person rdiaz
  • Cluster analysis of comparative genomic hybridization (CGH) data using self-organizing maps: application to prostate carcinomas.
    Anal Cell Pathol, Vol. 23, No. 1. (2001), pp. 29-37.
    by T Mattfeldt, H Wolter, R Kemmerling, HW Gottfried, HA Kestler
    posted to cgh clustering som by archroad on 2006-08-28 21:17:39 as ****
  • notes A statistical approach for array CGH data analysis.
    BMC Bioinformatics, Vol. 6 (2005)
    by F Picard, S Robin, M Lavielle, C Vaisse, JJ Daudin
    posted to cgh segmentation statistical by archroad on 2006-07-11 22:10:48 as read along with 6 people giovenko jfr rdiaz OscarRueda jackjackjjj shigepong
  • A Generalization of Principal Components Analysis to the Exponential Family
    (2002)
    by M Collins, S Dasgupta, RE Schapire
    edited by TG Dietterich, S Becker, Z Ghahramani
    posted to exponential pca by archroad on 2006-04-20 05:37:23 as *** along with 1 person kohei-h
  • A generalized linear model for principal component analysis of binary data
    (2003)
    by A Schein, L Saul, L Ungar
    posted to binary data pca by archroad on 2006-04-20 05:36:35 as ***** along with 1 person kohei-h
  • notes Quantitative analysis of comparative genomic hybridization.
    Cytometry, Vol. 19, No. 1. (1 January 1995), pp. 27-41.
    by S du Manoir, E Schröck, M Bentz, MR Speicher, S Joos, T Ried, P Lichter, T Cremer
    posted to cgh chromosomal by archroad on 2006-04-18 21:56:25 as ***
  • Evaluation of gene importance in microarray data based upon probability of selection.
    BMC Bioinformatics, Vol. 6, No. 1. (2005)
    by LM Fu, CS Fu-Liu
    posted to data gene microarray selection by archroad on 2006-04-14 05:22:56 as ** along with 3 people jfr jen_drake rdiaz
  • Diagnosis of multiple cancer types by shrunken centroids of gene expression
    PNAS, Vol. 99, No. 10. (14 May 2002), pp. 6567-6572.
    by Robert Tibshirani, Trevor Hastie, Balasubramanian Narasimhan, Gilbert Chu
    posted to centroid classification shrinking by archroad on 2006-04-14 05:21:54 as read along with 5 people and 1 group jfr giovanni frohike GeeSharpMinor jjrodriguez GeschwindLab
  • Generative model-based document clustering: a comparative study
    Knowledge and Information Systems (January 1900)
    by Shi Zhong, Joydeep Ghosh
    posted to clustering document model by archroad on 2006-04-07 22:11:02 as read along with 4 people ali noa karipuf kenji4569
  • notes Tumor etiology and chromosome pattern.
    Science, Vol. 176, No. 41. (23 June 1972), pp. 1340-1341.
    by F Mitelman, J Mark, G Levan, A Levan
    posted to no-tag by archroad on 2006-04-07 05:26:34 as *
  • Evaluation of hierarchical clustering algorithms for document datasets
    (2002), pp. 515-524.
    by Ying Zhao, George Karypis
    posted to clustering document hierarchical by archroad on 2006-04-04 21:25:06 as read along with 6 people and 1 group jelsas yas julianpan noa AlisonBabeu ykuoka T_lab
  • Fast and effective text mining using linear-time document clustering
    (1999), pp. 16-22.
    by Bjornar Larsen, Chinatsu Aone
    posted to clustering document f1-measure by archroad on 2006-04-04 20:31:53 as *** along with 2 people mkolar zador
  • On Clustering Validation Techniques
    Journal of Intelligent Information Systems, Vol. 17, No. 2-3. (2001), pp. 107-145.
    by Maria Halkidi, Yannis Batistakis, Michalis Vazirgiannis
    posted to clustering validation by archroad on 2006-03-22 22:28:53 as read
  • Estimating the number of clusters in a dataset via the gap statistic
    (2000)
    by R Tibshirani, G Walther, T Hastie
    posted to cluster gap statistic by archroad on 2006-03-16 22:41:51 as **** along with 4 people balajis aviad_work sugarexpletive ykuoka
  • Analysis of large-scale gene expression data.
    Brief Bioinform, Vol. 2, No. 4. (December 2001), pp. 350-362.
    by G Sherlock
    posted to clustering correlation microarray pca by archroad on 2006-03-14 22:43:00 as ****
  • Progenetix.net: an online repository for molecular cytogenetic aberration data.
    Bioinformatics, Vol. 17, No. 12. (December 2001), pp. 1228-1229.
    by M Baudis, ML Cleary
    posted to cgh by archroad on 2006-03-14 19:38:57 as read along with 1 person and 1 group ealloza BioinfoCIPF
  • Elements of Information Theory
    (12 August 1991)
    by Thomas M Cover, Joy A Thomas
    posted to cluster entropy f1-measure mutual-information validation by archroad on 2006-03-13 22:00:49 as ** along with 14 people Hans45 abellogin michaelmampaey dpf ecome stanley yaroslavvb leidner bayesian BarrosH infogrind kvorg pvfloripa zchen
  • Introduction to Data Mining
    (2005)
    by Pang-Ning Tan, Michael Steinbach, Vipin Kumar
    posted to cluster data mining validation by archroad on 2006-03-10 19:29:09 as ****
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