CiteULike is a free online bibliography manager. Register and you can start organising your references online.
Tags

FeatureStack: Perl module for comparative visualization of gene features

by: Christian Frech, Caleb Choo, Nansheng Chen
Bioinformatics, Vol. 28, No. 23. (01 December 2012), pp. 3137-3138, doi:10.1093/bioinformatics/bts572  Key: citeulike:11355390

Formatted Citation


Show HTML

Likes (beta)

This copy of the article hasn't been liked by anyone yet.

View FullText article


Abstract

Summary: FeatureStack is a Perl module for the automatic generation of multi-gene images. FeatureStack takes BioPerl-compliant gene or transcript features as input and renders them side by side using a user-defined BioPerl glyph. Output images can be generated in SVG or PNG format. FeatureStack comes with a new BioPerl glyph, decorated_gene, which can highlight protein features on top of gene models. Used in combination, FeatureStack and decorated_gene enable rapid and automated generation of annotation-rich images of stacked gene models that greatly facilitate evolutionary studies of related gene structures and gene families.


arjun_citeulike's tags for this article

Citations (CiTO)

No CiTO relationships defined

X There are no reviews yet

X Find related articles from these CiteULike users

X Find related articles with these CiteULike tags

X Posting History


X Export records

Privacy Statement | Terms & Conditions
CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.