ashaytan's library 234 articles Export

	Statistical potentials extracted from protein structures: how accurate are they? [My Copy] Journal of molecular biology, Vol. 257, No. 2. (29 March 1996), pp. 457-469. by P. D. Thomas, K. A. Dill posted to phd2 by ashaytan on 2009-02-12 10:26:34 as along with 1 person RamuAnandakrishnan
	Empirical protein energy maps. [My Copy] Nature: New biology, Vol. 234, No. 52. (29 December 1971), pp. 277-279. by F. M. Pohl posted to phd2 by ashaytan on 2009-02-11 22:04:44 as
	Description of atomic burials in compact globular proteins by Fermi-Dirac probability distributions [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 66, No. 2. (2007), pp. 304-320. by Antonio L. C. Gomes, Júlia R. de Rezende, Antônio, Eugene I. Shakhnovich posted to phd2 by ashaytan on 2009-02-09 15:03:39 as
	Conjugated Polymer-Based Chemical Sensors [My Copy] Chemical Reviews, Vol. 100, No. 7. (1 July 2000), pp. 2537-2574. by D. Tyler Mcquade, Anthony E. Pullen, Timothy M. Swager posted to phd3 review thiophene by ashaytan on 2009-01-16 11:47:12 as along with 1 person ashaytan3
	The Chemistry of Conducting Polythiophenes [My Copy] Advanced Materials, Vol. 10, No. 2. (1998), pp. 93-116. by Richard D. Mccullough posted to phd3 review thiophene by ashaytan on 2009-01-16 11:41:57 as
	Molecular Engineering of π -Conjugated Polymers [My Copy] Adv. Polym. Sci., Vol. 10 (1999), pp. 93-116. by J. L. Reddinger, J. R. Reynolds posted to phd3 review thiophene by ashaytan on 2009-01-16 11:34:10 as
	Polythiophenes - Electrically Conductive Polymers [My Copy] In Advances in Polymer Science, Vol. 129 (1997) by G. Schopf, G. Kobmehl posted to phd3 review thiophene by ashaytan on 2009-01-16 11:25:07 as
	Synthetic Principles for Bandgap Control in Linear π-Conjugated Systems [My Copy] Chemical Reviews, Vol. 97, No. 1. (1 February 1997), pp. 173-206. by Jean Roncali posted to phd3 review thiophene by ashaytan on 2009-01-16 11:19:19 as
	Conjugated poly(thiophenes): synthesis, functionalization, and applications [My Copy] Chemical Reviews, Vol. 92, No. 4. (1 June 1992), pp. 711-738. by Jean Roncali posted to phd3 review thiophene by ashaytan on 2009-01-16 11:18:31 as along with 1 person ashaytan3
	Conducting Polymers: A Review of Recent Work [My Copy] IBM J. Res. Dev., Vol. 25, No. 1. (1981), pp. 51-57. by G. B. Street, T. C. Clarke posted to phd3 review thiophene by ashaytan on 2009-01-16 10:36:53 as
	A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations [My Copy] Journal of Computational Chemistry, Vol. 24, No. 16. (December 2003), pp. 1999-2012. by Y. Duan, C. Wu, S. Chowdhury, et al.M. C. Lee, G. Xiong, W. Zhang, R. Yang, P. Cieplak, R. Luo, T. Lee, J. Caldwell, J. Wang, P. Kollman posted to phd1 by ashaytan on 2009-01-05 00:30:41 as along with 6 people and 1 group Vadikus flbarroso Lombardo_7 A_Coletta_Thesis xdeupi schlauchi LabCompMed
	Intermolecular Potentials of Mean Force of Amino Acid Side Chain Interactions in Aqueous Medium [My Copy] J. Phys. Chem. B, Vol. 108, No. 50. (16 December 2004), pp. 19501-19509. by S. A. Hassan posted to phd1 pmf by ashaytan on 2009-01-04 23:24:36 as along with 1 person choonpeng
	Free Energy Calculations. The Long and Winding Gilded Road [My Copy] Molecular Simulation, Vol. 28, No. 1. (2002), pp. 1-12. by Christophe Chipot, David A. Pearlman posted to phd1 review by ashaytan on 2009-01-03 22:44:47 as
	Spatial assignment of amino acid residues in globular proteins: An approach from information theory [My Copy] Journal of Theoretical Biology, Vol. 87, No. 4. (1980), pp. 623-637. by M. Prabhakaran, P. Ponnuswamy posted to phd2 by ashaytan on 2008-12-24 21:03:30 as
	Protein Physics [My Copy] In Protein Physics (2002) by Finkelstein, O. B. Ptitsyn posted to no-tag by ashaytan on 2008-12-24 20:11:20 as
	Random-energy model: An exactly solvable model of disordered systems [My Copy] Physical Review B, Vol. 24, No. 5. (1981), 2613. by Bernard Derrida posted to phd2 by ashaytan on 2008-12-23 21:59:51 as along with 2 people gi0rgi0ne r2s2
	Evaluation of Protein Hydropathy Scales [My Copy] Bioinformatics and Biomedicine, 2007. BIBM 2007. IEEE International Conference on In Bioinformatics and Biomedicine, 2007. BIBM 2007. IEEE International Conference on (2007), pp. 245-251. by S. Jaaskelainen, P. Riikonen, T. Salakoski, M. Vihinen posted to phd2 by ashaytan on 2008-12-03 09:49:53 as
	Octanol-to-water solvation free energies of acetyl amino amides (Ac-X-amides) [My Copy] Eur. J. Med. Chem. -- Chim. Ther., Vol. 18 (1983), 369. by J. L. Fauchère, V. Pliska posted to phd2 by ashaytan on 2008-12-02 22:18:32 as
	Perfect temperature for protein structure prediction and folding [My Copy] Proteins: Structure, Function, and Genetics, Vol. 23, No. 2. (1995), pp. 151-162. by Alexei V. Finkelstein, Alexander M. Gutin, Azat posted to phd2 by ashaytan on 2008-12-02 21:32:44 as
	Conformation-Dependent Sequence Design (Engineering) of AB Copolymers [My Copy] Physical Review Letters, Vol. 82, No. 17. (26 April 1999), 3456. by Alexei R. Khokhlov, Pavel G. Khalatur posted to phd2 by ashaytan on 2008-12-01 22:29:24 as
	Protein Design by Binary Patterning of Polar and Nonpolar Amino Acids [My Copy] Science, Vol. 262, No. 5140. (1993), pp. 1680-1685. by Satwik Kamtekar, Jarad M. Schiffer, Huayu Xiong, Jennifer M. Babik, Michael H. Hecht posted to denovo phd2 by ashaytan on 2008-12-01 22:10:49 as
	De novo design of the hydrophobic cores of proteins. [My Copy] Protein Sci, Vol. 4, No. 10. (October 1995), pp. 2006-2018. by J. R. Desjarlais, T. M. Handel posted to denovo phd2 by ashaytan on 2008-12-01 22:09:21 as along with 3 people and 1 group oteri dfgreen chgjb Structural Biology Group TorVergata
	De novo design of biomimetic antimicrobial polymers [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 8. (16 April 2002), pp. 5110-5114. by Gregory N. Tew, Dahui Liu, Bin Chen, et al.Robert J. Doerksen, Justin Kaplan, Patrick J. Carroll, Michael L. Klein, William F. Degrado posted to denovo phd2 by ashaytan on 2008-12-01 22:07:35 as
	Buried charged surface in proteins. [My Copy] Structure, Vol. 8, No. 11. (15 November 2000), pp. 1203-1214. by T. Kajander, P. C. Kahn, S. H. Passila, et al.D. C. Cohen, L. Lehtiö, W. Adolfsen, J. Warwicker, U. Schell, A. Goldman posted to phd2 by ashaytan on 2008-11-20 09:31:53 as along with 1 person and 1 group cat_worth structural_bioinformatics
	Hydrophobic regions on protein surfaces. Derivation of the solvation energy from their area distribution in crystallographic protein structures [My Copy] Protein Sci, Vol. 5, No. 8. (1 August 1996), pp. 1676-1686. by F. Eisenhaber posted to phd2 by ashaytan on 2008-11-20 09:29:57 as
	C60 in Water: Nanocrystal Formation and Microbial Response [My Copy] Environ. Sci. Technol., Vol. 39, No. 11. (1 June 2005), pp. 4307-4316. by J. D. Fortner, D. Y. Lyon, C. M. Sayes, et al.A. M. Boyd, J. C. Falkner, E. M. Hotze, L. B. Alemany, Y. J. Tao, W. Guo, K. D. Ausman, V. L. Colvin, J. B. Hughes posted to no-tag by ashaytan on 2008-10-06 11:35:09 as
	Simulation Study of Noncovalent Hybridization of Carbon Nanotubes by Single-Stranded DNA in Water [My Copy] J. Phys. Chem. B (19 August 2008) by Willis Martin, Wusheng Zhu, Goran Krilov posted to marine by ashaytan on 2008-09-13 13:55:01 as along with 1 person Marine
	Thermodynamic Parameters for the Adsorption of Aromatic Hydrocarbon Vapors at the Gas-Water Interface [My Copy] Journal of Chemical & Engineering Data, Vol. 47, No. 5. (2002), pp. 1213-1219. by S. Raja, F. S. Yaccone, R. Ravikrishna, K. T. Valsaraj posted to adsorption experiment by ashaytan on 2008-07-03 13:49:56 as
	Accommodation of ethanol, acetone and benzaldehyde by the liquid-vapor interface of water: A molecular dynamics study [My Copy] Chemical Physics, Vol. 327, No. 2-3. (11 September 2006), pp. 512-517. by Sébastien Canneaux, Jean-Christophe Soetens, Eric Henon, Frédéric Bohr posted to pmf simulations by ashaytan on 2008-06-09 21:45:06 as
	Hydroxyl Radical at the Air-Water Interface [My Copy] Journal of the American Chemical Society, Vol. 126, No. 50. (2004), pp. 16308-16309. by M. Roeselova, J. Vieceli, L. X. Dang, B. C. Garrett, D. J. Tobias posted to pmf by ashaytan on 2008-06-08 18:58:57 as
	Free energy of burying hydrophobic residues in the interface between protein subunits [My Copy] Proceedings of the National Academy of Sciences, Vol. 95, No. 11. (26 May 1998), pp. 6103-6107. by Beatrice Vallone, Adriana E. Miele, Paola Vecchini, Emilia Chiancone, Maurizio Brunori posted to phd2 by ashaytan on 2008-05-07 15:39:20 as
	Solvation energy in protein folding and binding. [My Copy] Nature, Vol. 319, No. 6050. (2 1986), pp. 199-203. by D. Eisenberg, A. D. McLachlan posted to phd2 by ashaytan on 2008-05-07 15:36:02 as along with 5 people flbarroso Thermaneutist oceanwind mijam ruvido
	Hydrophobicity at Small and Large Length Scales [My Copy] Journal of Physical Chemistry B, Vol. 103, No. 22. (1999), pp. 4570-4577. by K. Lum, D. Chandler, J. D. Weeks posted to phd2 by ashaytan on 2008-05-06 12:59:21 as
	CONNECTING LOCAL STRUCTURE TO INTERFACE FORMATION: A Molecular Scale van der Waals Theory of Nonuniform Liquids [My Copy] Annual Review of Physical Chemistry, Vol. 53, No. 1. (2002), pp. 533-562. by John D. Weeks posted to phd2 by ashaytan on 2008-05-06 12:32:51 as
	Liquid-state theory derivation of surface accessible solvation potential models for proteins [My Copy] The Journal of Chemical Physics, Vol. 116, No. 23. (2002), pp. 10475-10477. by Karl F. Freed posted to phd2 by ashaytan on 2008-05-06 12:27:15 as
	Surface area of globular proteins. [My Copy] Journal of molecular biology, Vol. 105, No. 1. (25 July 1976), pp. 13-14. by J. Janin posted to phd2 by ashaytan on 2008-04-30 08:54:00 as
	Molecular recognition : Conformational analysis of limited proteolytic sites and serine proteinase protein inhibitors [My Copy] Journal of Molecular Biology, Vol. 220, No. 2. (20 July 1991), pp. 507-530. by S. J. Hubbard, S. F. Campbell, J. M. Thornton posted to phd2 by ashaytan on 2008-04-24 13:35:44 as
	Basic local alignment search tool. [My Copy] Journal of molecular biology, Vol. 215, No. 3. (5 October 1990), pp. 403-410. by S. F. Altschul, W. Gish, W. Miller, E. W. Myers, D. J. Lipman posted to phd2 by ashaytan on 2008-04-23 09:19:06 as along with 77 people and 6 groups VGreiff richter80 krapnik azazello rshe mtaschuk sjcockell niallhaslam djohnson thegoose humburg timhubbard pachorip n00c maria_hauser rpetrenko parnell yylin esyoun APRegier idoerg Neeperando robert85 thegoose2 daforerog mcbla coela alessandroparini bertelsen Blackbeard florisbuijzen laurabailey treangen pwais mmartin tharris dmp camster davidng evaf dragonrez jwm jmeppley Ayest RMGraze ea yas balajis alexg indigoviolet moborg arcticrasta dullhunk dgront caporaso michC myui BioNica CitoJam rabio timflutre lusk cjeans incovoma beatrizfernandez wenhan jtomasch GustavoLacerda sgoetz siebertm ichbins81 jofiel Thaverkamp shung marti benwei granujilla C. elegans / WormBase dbk-lab EisenLab T_lab biomedical-nlp Microbial-Ecology
	Kinetic models in protein folding [My Copy] In Mechanisms in Protein Folding (2000) by O. Bieri, T. Kiefhaber edited by R. H. Pain posted to phd2 by ashaytan on 2008-04-21 17:58:40 as
	Lonely Arginine Seeks Friendly Environment [My Copy] J. Gen. Physiol., Vol. 130, No. 2. (30 July 2007), pp. 233-236. by Benoit Roux posted to phd2 by ashaytan on 2008-04-14 11:03:13 as along with 1 person paulschlesinger
	Solvation energies of amino acid side chains and backbone in a family of host-guest pentapeptides. [My Copy] Biochemistry, Vol. 35, No. 16. (23 April 1996), pp. 5109-5124. by W. C. Wimley, T. P. Creamer, S. H. White posted to experiment phd2 by ashaytan on 2008-04-13 15:33:34 as along with 1 person jjurban
	Effect of Hydrophobicity of Amino Acids on the Structure of Water [My Copy] J. Phys. Chem. B, Vol. 101, No. 35. (28 August 1997), pp. 7022-7026. by M. Ide, Y. Maeda, H. Kitano posted to phd2 by ashaytan on 2008-04-13 14:24:51 as
	Hydrophobic distribution and spatial arrangement of amino acid residues in membrane proteins. [My Copy] International journal of peptide and protein research, Vol. 48, No. 5. (November 1996), pp. 452-460. by M. M. Gromiha, P. K. Ponnuswamy posted to phd2 by ashaytan on 2008-04-13 14:21:39 as
	Amino Acid Solubility and Hydrophobic Interactions in Proteins: the Work of Charles Tanford [My Copy] J. Biol. Chem., Vol. 283, No. 4. (25 January 2008), e3. by Nicole Kresge, Robert D. Simoni, Robert L. Hill posted to phd2 by ashaytan on 2008-04-13 14:20:34 as along with 1 person paulschlesinger
	Membrane protein folding and stability: physical principles. [My Copy] Annu Rev Biophys Biomol Struct, Vol. 28 (1999), pp. 319-365. by S. H. White, W. C. Wimley posted to phd2 by ashaytan on 2008-04-13 13:53:14 as along with 1 person thaliana
	Partition coefficients and their uses [My Copy] Chemical Reviews, Vol. 71, No. 6. (1971), pp. 525-616. by Albert Leo, Corwin Hansch, David Elkins posted to bibtex-import by ashaytan on 2008-04-13 12:35:04 as
	Experimental Measures of Amino Acid Hydrophobicity and the Topology of Transmembrane and Globular Proteins [My Copy] J. Gen. Physiol., Vol. 129, No. 5. (30 April 2007), pp. 357-362. by Richard Wolfenden posted to experiment phd2 by ashaytan on 2008-04-13 12:11:37 as along with 1 person melo_mcr
	Amino acid side-chain partition energies and distribution of residues in soluble proteins. [My Copy] Biophysical journal, Vol. 47, No. 1. (January 1985), pp. 61-70. by H. R. Guy posted to comp phd2 by ashaytan on 2008-04-12 12:11:24 as
	Why do protein architectures have boltzmann-like statistics? [My Copy] Proteins: Structure, Function, and Genetics, Vol. 23, No. 2. (1995), pp. 142-150. by Alexei V. Finkelstein, Azat Y. Badretdinov, Alexander M. Gutin posted to phd2 by ashaytan on 2008-04-03 15:22:45 as
	Boltzmann-type distribution of side-chain conformation in proteins. [My Copy] Protein Sci, Vol. 12, No. 12. (December 2003), pp. 2719-2731. by G. L. Butterfoss, J. Hermans posted to comp phd2 by ashaytan on 2008-04-03 15:19:09 as along with 1 person blackbart

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