austin's rna [98 articles] Export

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	Imaging target mRNA and siRNA-mediated gene silencing in vivo with ribozyme-based reporters. [My Copy] Chembiochem : a European journal of chemical biology, Vol. 9, No. 16. (3 November 2008), pp. 2682-2691. by M. K. So, G. Gowrishankar, S. Hasegawa, J. K. Chung, J. Rao posted to detection reporter ribozyme rna by austin on 2009-04-21 03:55:50 as
	Higher-Order Cellular Information Processing with Synthetic RNA Devices [My Copy] Science, Vol. 322, No. 5900. (17 October 2008), pp. 456-460. by Maung N. Win, Christina D. Smolke posted to logic rna by austin on 2008-11-25 21:20:59 as along with 7 people jbhiatt hrogers lflorez grahamc alexknight marck erel10
	Transcription monitoring using fused RNA with a dye-binding light-up aptamer as a tag: a blue fluorescent RNA. [My Copy] Chemical communications (Cambridge, England), No. 33. (7 September 2008), pp. 3858-3860. by S. Sando, A. Narita, M. Hayami, Y. Aoyama posted to aptamer fluorescent reporter rna by austin on 2008-09-12 17:33:59 as along with 1 person Vincent_Rouilly
	Biological regulation by antisense RNA in prokaryotes. [My Copy] Annual review of genetics, Vol. 22 (1988), pp. 567-600. by R. W. Simons, N. Kleckner posted to antisense review rna by austin on 2008-08-20 04:00:38 as
	Exogenous control of mammalian gene expression through modulation of RNA self-cleavage. [My Copy] Nature, Vol. 431, No. 7007. (23 September 2004), pp. 471-476. by L. Yen, J. Svendsen, J. S. Lee, et al.J. T. Gray, M. Magnier, T. Baba, R. J. D'Amato, R. C. Mulligan posted to control ribozyme rna by austin on 2008-08-17 03:46:01 as along with 1 person rklancer
	Natural and engineered nucleic acids as tools to explore biology [My Copy] Nature, Vol. 432, No. 7019. (16 December 2004), pp. 838-845. by Ronald R. Breaker posted to review riboswitch rna by austin on 2008-08-17 03:08:00 as along with 3 people and 3 groups marcius condon Kiarostami beta BioinfoCIPF SGU-CIPF
	Self-splicing of a group I intron reveals partitioning of native and misfolded RNA populations in yeast. [My Copy] RNA (New York, N.Y.), Vol. 12, No. 12. (December 2006), pp. 2149-2159. by S. A. Jackson, S. Koduvayur, S. A. Woodson posted to folding groupi kinetictrap rna tetrahymena by austin on 2008-07-21 04:10:19 as
	Circular mRNA can direct translation of extremely long repeating-sequence proteins in vivo. [My Copy] RNA (New York, N.Y.), Vol. 4, No. 9. (September 1998), pp. 1047-1054. by R. Perriman, M. Ares posted to groupi ribozyme rna by austin on 2008-07-17 02:45:38 as
	Synthesis of circular RNA in bacteria and yeast using RNA cyclase ribozymes derived from a group I intron of phage T4. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 91, No. 8. (12 April 1994), pp. 3117-3121. by E. Ford, M. Ares posted to groupi ribozyme rna by austin on 2008-07-17 02:32:47 as
	CONTRAfold: RNA secondary structure prediction without physics-based models. [My Copy] Bioinformatics, Vol. 22, No. 14. (15 July 2006) by C. B. Do, D. A. Woods, S. Batzoglou posted to folding prediction rna secondary structure by austin on 2008-07-17 02:09:45 as along with 7 people and 3 groups gulkur balajis marcius tardigrade penka condon acarbo beta BioinfoCIPF SGU-CIPF
	Specificity of RNA-RNA helix recognition. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 18. (3 September 2002), pp. 11676-11681. by D. J. Battle, J. A. Doudna posted to a-minor rna structure by austin on 2008-07-14 02:05:16 as
	5' exon replacement and repair by spliceosome-mediated RNA trans-splicing. [My Copy] RNA (New York, N.Y.), Vol. 9, No. 10. (October 2003), pp. 1290-1297. by S. G. Mansfield, R. H. Clark, M. Puttaraju, et al.J. Kole, J. A. Cohn, L. G. Mitchell, M. A. Garcia-Blanco posted to rna spliceosome trans-splicing by austin on 2008-07-13 20:28:03 as
	Generalized RNA-directed recombination of RNA. [My Copy] Chemistry & biology, Vol. 10, No. 12. (December 2003), pp. 1233-1243. by C. A. Riley, N. Lehman posted to recombination ribozyme rna by austin on 2008-07-13 19:44:36 as
	RNA-catalyzed RNA ligation on an external RNA template. [My Copy] Chemistry & biology, Vol. 9, No. 3. (March 2002), pp. 297-307. by K. E. McGinness, G. F. Joyce posted to evolution ligation ribozyme rna by austin on 2008-07-13 19:07:19 as
	Controlling Messenger RNA Stability in Bacteria: Strategies for Engineering Gene Expression [My Copy] Biotechnology Progress, Vol. 13, No. 6. (c 1997), pp. 699-708. by Trent A. Carrier, J. D. Keasling posted to rna stability syntheticbiology by austin on 2008-07-12 13:54:40 as along with 1 person Vincent_Rouilly
	RNA synthetic biology [My Copy] Nat Biotech, Vol. 24, No. 5. (05 May 2006), pp. 545-554. by Farren J. Isaacs, Daniel J. Dwyer, James J. Collins posted to rna syntheticbiology by austin on 2008-07-11 21:54:51 as along with 8 people and 4 groups abhishek_tiwari msuarezdiez rklancer lingchong marcius balabu dbikard grahamc BioinfoCIPF SGU-CIPF Centre de Recherches Interdisciplinaires SynBioSys
	Ribozyme-mediated selective induction of new gene activity in hepatitis C virus internal ribosome entry site-expressing cells by targeted trans-splicing. [My Copy] Molecular therapy, Vol. 7, No. 3. (March 2003), pp. 386-395. by K. J. Ryu, J. H. Kim, S. W. Lee posted to genetherapy groupi ribozyme rna trans-splicing by austin on 2008-07-11 21:31:18 as
	A versatile communication module for controlling RNA folding and catalysis. [My Copy] Nucleic acids research, Vol. 30, No. 21. (1 November 2002), pp. 4599-4606. by A. Kertsburg, G. A. Soukup posted to control ribozyme rna by austin on 2008-07-11 18:52:06 as
	Rube Goldberg goes (ribo)nuclear? Molecular switches and sensors made from RNA [My Copy] RNA, Vol. 9, No. 4. (1 April 2003), pp. 377-383. by Scott K. Silverman posted to ribozyme rna switches by austin on 2008-07-11 18:49:47 as along with 1 person eckart_bindewald
	RNA visualization in live bacterial cells using fluorescent protein complementation [My Copy] Nat Meth, Vol. 4, No. 5. (May 2007), pp. 421-427. by Maria Valencia-Burton, Ron M. Mccullough, Charles R. Cantor, Natalia E. Broude posted to aptamer reporter rna by austin on 2008-07-11 00:03:53 as along with 5 people jjray guhjy madhadron zwang medelyan
	RNA folding: models and perspectives. [My Copy] Curr Opin Struct Biol, Vol. 13, No. 3. (June 2003), pp. 309-316. by T. R. Sosnick, T. Pan posted to folding rna by austin on 2008-07-04 23:59:38 as along with 3 people and 2 groups evaf marcius Hosna BioinfoCIPF SGU-CIPF
	The structural basis of ribozyme-catalyzed RNA assembly. [My Copy] Science, Vol. 315, No. 5818. (16 March 2007), pp. 1549-1553. by M. P. Robertson, W. G. Scott posted to ligase ribozyme rna structure by austin on 2008-07-04 23:59:09 as along with 1 person jwm
	Prediction of RNA secondary structure by free energy minimization. [My Copy] Curr Opin Struct Biol, Vol. 16, No. 3. (June 2006), pp. 270-278. by D. H. Mathews, D. H. Turner posted to folding rna by austin on 2008-07-04 23:58:34 as along with 2 people heliopais onufriev
	Predicting a set of minimal free energy RNA secondary structures common to two sequences. [My Copy] Bioinformatics, Vol. 21, No. 10. (15 May 2005), pp. 2246-2253. by D. H. Mathews posted to folding rna by austin on 2008-07-04 23:58:21 as along with 3 people and 2 groups marcius eckart_bindewald arcticrasta BioinfoCIPF SGU-CIPF
	Using an RNA secondary structure partition function to determine confidence in base pairs predicted by free energy minimization. [My Copy] RNA, Vol. 10, No. 8. (August 2004), pp. 1178-1190. by D. H. Mathews posted to folding rna by austin on 2008-07-04 23:58:02 as along with 5 people and 1 group evaf arcticrasta condon Hosna Kiarostami beta
	Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 19. (11 May 2004), pp. 7287-7292. by David H. Mathews, Matthew D. Disney, Jessica L. Childs, Susan J. Schroeder, Michael Zuker, Douglas H. Turner posted to folding rna by austin on 2008-07-04 23:57:43 as along with 6 people and 1 group haarcuba ellarond eckart_bindewald arcticrasta condon Hosna beta
	A method for rapid similarity analysis of RNA secondary structures [My Copy] BMC Bioinformatics, Vol. 7 (08 November 2006), 493. by Na Liu, Tianming Wang posted to folding rna by austin on 2008-07-04 23:57:22 as along with 1 person dquest
	How do RNA folding algorithms work? [My Copy] Nature biotechnology, Vol. 22, No. 11. (November 2004), pp. 1457-1458. by S. R. Eddy posted to folding rna by austin on 2008-07-04 23:56:18 as along with 14 people and 2 groups guhjy heliopais mjoach ellarond evaf marcius tardigrade mtagaya 3times3 cthachuk magnolia maralena guxiyou cambray BioinfoCIPF SGU-CIPF
	Clustering of RNA Secondary Structures with Application to Messenger RNAs [My Copy] Journal of Molecular Biology, Vol. 359, No. 3. (9 June 2006), pp. 554-571. by Ye Ding, Chi Y. Chan, Charles E. Lawrence posted to rna secondary sfold structure by austin on 2008-07-04 23:55:51 as along with 1 person tardigrade
	Revolutions in RNA Secondary Structure Prediction [My Copy] Journal of Molecular Biology, Vol. 359, No. 3. (9 June 2006), pp. 526-532. by David H. Mathews posted to prediction rna secondary structure by austin on 2008-07-04 22:44:48 as along with 11 people and 2 groups bmduggan heliopais marcius arcticrasta penka Eonwe cthachuk emidio_capriotti physics maralena winterschlaefer BioinfoCIPF SGU-CIPF
	RNA folding during transcription. [My Copy] Annual review of biophysics and biomolecular structure, Vol. 35 (2006), pp. 161-175. by T. Pan, T. Sosnick posted to folding ribozyme rna transcription by austin on 2008-07-04 14:00:08 as along with 1 person cactus
	Ribozyme-mediated revision of RNA and DNA. [My Copy] Journal of clinical investigation, Vol. 112, No. 3. (August 2003), pp. 312-318. by M. B. Long, J. P. Jones, B. A. Sullenger, J. Byun posted to dna review ribozyme rna by austin on 2008-07-04 00:40:12 as
	The interaction networks of structured RNAs [My Copy] Nucleic Acids Research, Vol. 34, No. 22. (December 2006), pp. 6587-6604. by Lescoute, A., Westhof, E. posted to rna secondary structure by austin on 2008-06-29 02:12:36 as along with 7 people and 2 groups jec105 marcius jarasch debatebob ankur_iitg jennifermbui reyez BioinfoCIPF SGU-CIPF
	Widespread selection for local RNA secondary structure in coding regions of bacterial genes. [My Copy] Genome research, Vol. 13, No. 9. (September 2003), pp. 2042-2051. by Luba Katz, Christopher B. Burge posted to bias codon interesting rna by austin on 2008-06-29 02:11:23 as along with 1 person bpcusack
	Engineering a ligand-dependent RNA transcriptional activator. [My Copy] Chem Biol, Vol. 11, No. 8. (August 2004), pp. 1157-1163. by A. R. Buskirk, A. Landrigan, D. R. Liu posted to activator aptamer rna by austin on 2008-06-29 01:58:00 as along with 1 person mdimmic
	Kinetic intermediates trapped by native interactions in RNA folding [My Copy] Science, Vol. 279, No. 5358. (20 March 1998), pp. 1943-1946. by Daniel K. Treiber, Martha S. Rook, Patrick P. Zarrinkar, James R. Williamson posted to folding rna tetrahymena by austin on 2008-06-25 22:52:09 as
	Folding intermediates of a self-splicing RNA: mispairing of the catalytic core. [My Copy] Journal of molecular biology, Vol. 280, No. 4. (24 July 1998), pp. 597-609. by J. Pan, S. A. Woodson posted to folding groupi ribozyme rna tetrahymena by austin on 2008-06-25 21:57:52 as
	Rational design and rapid screening of antisense oligonucleotides for prokaryotic gene modulation [My Copy] Nucleic Acids Research, Vol. 34, No. 19. (November 2006), pp. 5660-5669. by Yu Shao, Yan Wu, Chi Y. Chan, Kathleen Mcdonough, Ye Ding posted to accessibility prediction rna sfold by austin on 2008-06-24 12:26:54 as along with 1 person ilh
	Efficient and specific repair of sickle beta-globin RNA by trans-splicing ribozymes. [My Copy] RNA (New York, N.Y.), Vol. 9, No. 10. (October 2003), pp. 1254-1263. by J. Byun, N. Lan, M. Long, B. A. Sullenger posted to groupi repair ribozyme rna trans-splicing by austin on 2008-06-22 04:55:40 as
	A novel sequence-specific RNA quantification method using nicking endonuclease, dual-labeled fluorescent DNA probe, and conformation-interchangeable oligo-DNA. [My Copy] RNA (New York, N.Y.), Vol. 14, No. 3. (March 2008), pp. 584-592. by K. Hosoda, T. Matsuura, H. Kita, et al.N. Ichihashi, K. Tsukada, I. Urabe, T. Yomo posted to measurement rna by austin on 2008-06-19 04:59:38 as
	The bacterial enzyme RppH triggers messenger RNA degradation by 5′ pyrophosphate removal [My Copy] Nature, Vol. 451, No. 7176., pp. 355-358. by Atilio Deana, Helena Celesnik, Joel G. Belasco posted to degradation rna by austin on 2008-06-17 03:56:24 as along with 1 person skato_toyaku
	Cis-regulatory hairpin-shaped mRNA encoding a reporter protein: catalytic sensing of nucleic acid sequence at single nucleotide resolution. [My Copy] Nature protocols, Vol. 2, No. 5. (2007), pp. 1105-1116. by A. Narita, K. Ogawa, S. Sando, Y. Aoyama posted to protocol reporter riboregulator rna by austin on 2008-06-17 03:55:42 as
	Minimally invasive determination of mRNA concentration in single living bacteria. [My Copy] Nucleic acids research, Vol. 36, No. 12. (30 July 2008) by Călin C. Guet, Luke Bruneaux, Taejin L. Min, et al.Dan Siegal-Gaskins, Israel Figueroa, Thierry Emonet, Philippe Cluzel posted to measurement rna by austin on 2008-06-12 17:33:42 as along with 3 people dantimatter madhadron bakakaj
	Improved native affinity purification of RNA [My Copy] RNA, Vol. 13, No. 8. (1 August 2007), pp. 1384-1389. by Robert T. Batey, Jeffrey S. Kieft posted to purification ribozyme rna by austin on 2008-06-11 13:05:46 as along with 1 person zibdum
	Recent insights on RNA folding mechanisms from catalytic RNA. [My Copy] Cellular and molecular life sciences : CMLS, Vol. 57, No. 5. (May 2000), pp. 796-808. by S. A. Woodson posted to folding ribozyme rna by austin on 2008-06-02 20:59:53 as
	Switching on and off with RNA. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 97, No. 18. (29 August 2000), pp. 9824-9826. by S. Altuvia, E. G. Wagner posted to dsra oxys riboregulator rna switch by austin on 2008-05-29 22:35:36 as along with 1 person dquest
	RNA chaperones, RNA annealers and RNA helicases. [My Copy] RNA biology, Vol. 4, No. 3. (November 2007), pp. 118-130. by L. Rajkowitsch, D. Chen, S. Stampfl, et al.K. Semrad, C. Waldsich, O. Mayer, M. F. Jantsch, R. Konrat, U. Bläsi, R. Schroeder posted to annealing chaperone folding helicase review rna by austin on 2008-05-29 17:13:19 as
	RNA chaperone activity and RNA-binding properties of the E. coli protein StpA. [My Copy] Nucleic acids research, Vol. 35, No. 4. (2007), pp. 1257-1269. by O. Mayer, L. Rajkowitsch, C. Lorenz, R. Konrat, R. Schroeder posted to chaperone rna stpa td by austin on 2008-05-28 00:25:48 as
	Influence of RNA structural stability on the RNA chaperone activity of the Escherichia coli protein StpA. [My Copy] Nucleic acids research, Vol. 33, No. 7. (2005), pp. 2280-2289. by R. Grossberger, O. Mayer, C. Waldsich, K. Semrad, S. Urschitz, R. Schroeder posted to chaperone ribozyme rna splicing stpa td by austin on 2008-05-27 23:52:37 as
	Evidence for kinetic effects in the folding of large RNA molecules [My Copy] The Journal of Chemical Physics, Vol. 105, No. 16. (1996), pp. 7152-7157. by Steven R. Morgan, Paul G. Higgs posted to folding kinetics rna by austin on 2008-05-25 18:25:00 as

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ribozyme	159
rna	98
syntheticbiology	96
tetrahymena	73
groupi	52
folding	36
structure	28
biochemistry	27
review	24
mutagenesis	21
dna	20
trans-splicing	16
design	13
reporter	13
selection	13
website	12
assembly	11
groupii	11
noise	11
recombination	11
repair	11
splicing	11
aptamer	10
pseudoknot	10
prediction	9
control	8
expression	8
helicase	8
circuit	7
evolution	7
excision	7
gene	7
invitro	7
parts	7
regulation	7
riboswitch	7
codon	6
crystal	6
gfp	6
ligase	6
malachitegreen	6
measurement	6
networks	6
secondary	6
switch	6
activation	5
amplification	5
chaperone	5
cloning	5
enzyme	5
fluorescence	5
kinetics	5
protein	5
protocol	5
sequencing	5
synthesis	5
abstraction	4
azoarcus	4
bias	4
coli	4
detection	4
ecoli	4
efficiency	4
engineering	4
genetherapy	4
genome	4
glycosylase	4
hfq	4
intron	4
kinefold	4
logic	4
metabolic	4
mismatch	4
modeling	4
rca	4
restriction	4
riboregulator	4
singlemolecule	4
split	4
transcription	4
translation	4
trna	4
antisense	3
cancer	3
database	3
degradation	3
deoxyribozyme	3
excellent	3
fluorescent	3
geneticcode	3
igs	3
in	3
kinetictrap	3
library	3
light	3
linear	3
modularity	3
nicking	3
phage	3
plasmid	3
pna	3
promoter	3
quantification	3
quorum	3
replication	3
rnasep	3
sensor	3
sequence	3
stability	3
stochastic	3
stpa	3
templiphi	3
useful	3
vitro	3
zincfinger	3
accessibility	2
aminoacids	2
automation	2
bistability	2
catalysis	2
commentary	2
conserved	2
copynumber	2
dsra	2
endonuclease	2
erythromycin	2
gates	2
gateway	2
genomics	2
hairpin	2
hammerhead	2
initiation	2
lactococcus	2
ligation	2
memory	2
metabolic_engineering	2
method	2
microarray	2
microfluidics	2
minimal	2
model	2
modular	2
molecule	2
mutation	2
n15	2
neat	2
oscillation	2
pcr	2
perspective	2
polymerase	2
rewiring	2
rnarna	2
robustness	2
sfold	2
signal	2
single	2
ssra	2
tag	2
td	2
tdt	2
therapy	2
thesis	2
transcriptional	2
transduction	2
yeast	2
activator	1
adp1	1
aging	1
alignment	1
alteration	1
a-minor	1
annealing	1
asymmetric	1
bacillus	1
bacterial	1
base	1
binding	1
biofuel	1
biomaterial	1
bioreactor	1
blunt_ligation	1
cad	1
cell_cycle	1
chemical	1
clpxp	1
code	1
codons	1
comparison	1
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complementation	1
complexity	1
cooperative	1
correlation	1
counter	1
crosstalk	1
dbpa	1
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digital	1
dimerization	1
directed	1
discovery	1
division	1
dnazyme	1
dynamics	1
emulsion	1
equitans	1
essential	1
extracellular	1
feedback	1
feedback-loop	1
functional	1
gaaa	1
gate	1
generation	1
genetic	1
genomes	1
gnra	1
grammar	1
halflife	1
hda	1
hok	1
homingendonuclease	1
human	1
hypoxia	1
iii	1
inducible	1
industrial	1
interesting	1
invasin	1
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inverse	1
kinetic	1
kinfold	1
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laci	1
lacz	1
lambda	1
language	1
ligand-dna	1
logos	1
lux	1
machine_learning	1
magnetic	1
mapping	1
matrix	1
mcherry	1
media	1
memristor	1
meta	1
mig	1
modified	1
molecular	1
motif	1
movie	1
mri	1
multidrug	1
mutations	1
mycoplasma	1
nanoarchaeum	1
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nmt1	1
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nucleotides	1
oligo	1
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oscillator	1
oxys	1
p1	1
partsregistry	1
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pesudoknot	1
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plant	1
polio	1
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rational	1
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research	1
reverse	1
rfam	1
rfp	1
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rnaseiii	1
rules	1
s1	1
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sensing	1
sequencelogo	1
shrna	1
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signaling	1
signals	1
slic	1
snp	1
software	1
sok	1
spec	1
specific	1
specificity	1
spectroscopy	1
spliceosome	1
splicesome	1
srna	1
stochasticity	1
strand	1
subtilis	1
suicide	1
switches	1
symmetry	1
systems	1
t7	1
targeting	1
tdg	1
telomere	1
temperature	1
tetracycline	1
tetraloop	1
tetrayhmena	1
theophylline	1
therapeutic	1
thermometers	1
tis	1
tpp	1
trans	1
trans-acting	1
transcriptase	1
transfer	1
transformation	1
transposon	1
twin	1
unnatural	1
usage	1
vaccine	1
viennarna	1
virus	1
visualization	1
wo	1

austin's rna [98 articles] Export

austin's tags