azazello's mapped_assembly [12 articles] Export

Recent papers added to azazello's library classified by the tag mapped_assembly. You can also see everyone's mapped_assembly.

Hide details

	A consistency-based consensus algorithm for de novo and reference-guided sequence assembly of short reads [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1118-1124. by Tobias Rausch, Sergey Koren, Gennady Denisov, et al.David Weese, Anne-Katrin Emde, Andreas Doring, Knut Reinert posted to scaffolding mapped_assembly by azazello on 2009-11-16 15:49:53 as along with 19 people and 2 groups jfr hzoltan cthachuk GustavoLacerda jasontsai n00c nuin dakelley skembel Thaverkamp reyez TRHvidsten djkt hpaces APRegier pengchy natstreet druvus darian iSEEM Bioinformatics
	Efficient q-Gram Filters for Finding All e-Matches over a Given Length [My Copy] Research in Computational Molecular Biology (2005), pp. 189-203. by Kim R. Rasmussen, Jens Stoye, Eugene W. Myers posted to mapped_assembly alignment by azazello on 2009-09-01 03:09:04 as
	PatternHunter II: highly sensitive and fast homology search. [My Copy] Genome informatics. International Conference on Genome Informatics, Vol. 14 (2003), pp. 164-175. by Ming Li, Bin Ma, Derek Kisman, John Tromp posted to ngst mapped_assembly alignment 2gst by azazello on 2009-09-01 02:58:30 as along with 3 people maria_hauser nuke2005 treangen
	Gene-Boosted Assembly of a Novel Bacterial Genome from Very Short Reads [My Copy] PLoS Comput Biol, Vol. 4, No. 9. (26 September 2008), e1000186. by Steven L. Salzberg, Daniel D. Sommer, Daniela Puiu, Vincent T. Lee posted to prok-seq-cg-pipeline 2gst mapped_assembly scaffolding by azazello on 2009-07-10 12:51:24 as along with 17 people and 5 groups skembel n00c operon michaelbarton Thaverkamp dakelley sconlan GustavoLacerda treangen natstreet antonkratz druvus vaulot djkt Katje stajich semrich BergmanLab Papers recommended by the Roscoff Plankton Group iSEEM microbiology_nijmegen Mycology
	A new pheromone trail-based genetic algorithm for comparative genome assembly [My Copy] Nucl. Acids Res., Vol. 36, No. 10. (1 June 2008), pp. 3455-3462. by Fangqing Zhao, Fanggeng Zhao, Tao Li, Donald A. Bryant posted to mapped_assembly by azazello on 2008-12-19 21:57:23 as along with 1 person and 1 group fqzhao Bioinformatics
	CAAT-Box, Contigs-Assembly and Annotation Tool-Box for genome sequencing projects. [My Copy] Bioinformatics (Oxford, England), Vol. 20, No. 5. (22 March 2004), pp. 790-797. by L. Frangeul, P. Glaser, C. Rusniok, et al.C. Buchrieser, E. Duchaud, P. Dehoux, F. Kunst posted to mapped_assembly by azazello on 2008-12-19 21:49:14 as
	DNPTrapper: an assembly editing tool for finishing and analysis of complex repeat regions. [My Copy] BMC bioinformatics, Vol. 7 (2006) by E. Arner, M. T. Tammi, A. N. Tran, E. Kindlund, B. Andersson posted to mapped_assembly by azazello on 2008-12-19 21:48:29 as along with 1 person dakelley
	ReDiT: Repeat Discrepancy Tagger--a shotgun assembly finishing aid. [My Copy] Bioinformatics (Oxford, England), Vol. 20, No. 5. (22 March 2004), pp. 803-804. by M. T. Tammi, E. Arner, E. Kindlund, B. Andersson posted to mapped_assembly by azazello on 2008-12-19 21:48:03 as
	OSLay: optimal syntenic layout of unfinished assemblies [My Copy] Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. 1573-1579. by Daniel C. Richter, Stephan C. Schuster, Daniel H. Huson posted to mapped_assembly by azazello on 2008-12-19 21:44:51 as along with 4 people n00c dakelley AaronDarling GustavoLacerda
	Mauve: Multiple Alignment of Conserved Genomic Sequence With Rearrangements [My Copy] Genome Research, Vol. 14, No. 7. (July 2004), pp. 1394-1403. by Aaron C. E. Darling, Bob Mau, Frederick R. Blattner, Nicole T. Perna posted to scaffolding qual prok-seq-cg-pipeline mapped_assembly by azazello on 2008-03-25 13:59:11 as along with 13 people and 2 groups rneches foxpowa APRegier ArtemPankin hpaces Neeperando bcondon semrich operon catmat AaronDarling mariakmejia druvus Khavkin's lab gatech-compgenomics
	Projector: automatic contig mapping for gap closure purposes. [My Copy] Nucleic Acids Res, Vol. 31, No. 22. (15 November 2003) by S. A. van Hijum, A. L. Zomer, O. P. Kuipers, J. Kok posted to prok-seq-cg-pipeline mapped_assembly scaffolding by azazello on 2008-01-25 17:13:25 as along with 1 group gatech-compgenomics
	Projector 2: contig mapping for efficient gap-closure of prokaryotic genome sequence assemblies. [My Copy] Nucleic Acids Res, Vol. 33, No. Web Server issue. (1 July 2005) by S. A. van Hijum, A. L. Zomer, O. P. Kuipers, J. Kok posted to prok-seq-cg-pipeline mapped_assembly qual scaffolding by azazello on 2008-01-25 17:12:53 as along with 1 person and 1 group AaronDarling gatech-compgenomics

Note: You may cite this page as: http://www.citeulike.org/user/azazello/tag/mapped_assembly

prok-seq-cg-pipeline	67
binning	53
evol-gene-duplicates	43
qual	29
metagenomics	18
mgs-nst	17
crispr	14
mapped_assembly	12
frameshift	6
core-pan	5
neisseria-hgt	5
scaffolding	5
2gst	4
cse	4
fs-bib	4
genefinding	4
my	4
ngst	4
classic	3
454	2
alignment	2
3gst	1
bgo	1
cs	1
est	1
evol-genetics	1
polymorphism	1
wtf	1

azazello's mapped_assembly [12 articles] Export

azazello's tags