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balicea's genome-variation [123 articles]

Recent papers added to balicea's library classified by the tag genome-variation. You can also see everyone's genome-variation.
  • A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome
    Science (3 July 2008), 1160342.
    by Marc Sultan, Marcel H Schulz, Hugues Richard, Alon Magen, Andreas Klingenhoff, Matthias Scherf, Martin Seifert, Tatjana Borodina, Aleksey Soldatov, Dmitri Parkhomchuk, Dominic Schmidt, Sean O'Keeffe, Stefan Haas, Martin Vingron, Hans Lehrach, Marie-Laure Yaspo
  • Population genetic analysis of shotgun assemblies of genomic sequences from multiple individuals
    Genome Res., Vol. 18, No. 7. (1 July 2008), pp. 1020-1029.
    by Ines Hellmann, Yuan Mang, Zhiping Gu, Peter Li, de La, Andrew G Clark, Rasmus Nielsen
  • Compositional constraints and genome evolution.
    Journal of molecular evolution, Vol. 24, No. 1-2. (1986), pp. 1-11.
  • Distinct and overlapping roles of single-repeat MYB genes in root epidermal patterning.
    Developmental biology, Vol. 311, No. 2. (15 November 2007), pp. 566-578.
    by M Simon, MM Lee, Y Lin, L Gish, J Schiefelbein
  • Polygenes, Risk Prediction, and Targeted Prevention of Breast Cancer
    N Engl J Med, Vol. 358, No. 26. (26 June 2008), pp. 2796-2803.
    by Paul D Pharoah, Antonis C Antoniou, Douglas F Easton, Bruce A Ponder
  • Establishing mathematical laws of genomic variation.
    J Appl Meas, Vol. 5, No. 1. (2004), pp. 1-14.
    by NJ Markward
  • The impact of recombination on nucleotide substitutions in the human genome.
    PLoS genetics, Vol. 4, No. 5. (May 2008)
    by L Duret, PF Arndt
  • Genetics. A ruff theory of evolution: gene stutters drive dog shape.
    Science (New York, N.Y.), Vol. 306, No. 5705. (24 December 2004)
    by E Pennisi
  • Genome-wide association scans identified CTNNBL1 as a novel gene for obesity
    Hum. Mol. Genet., Vol. 17, No. 12. (15 June 2008), pp. 1803-1813.
    by Yong-Jun Liu, Xiao-Gang Liu, Liang Wang, Christian Dina, Han Yan, Jian-Feng Liu, Shawn Levy, Christopher J Papasian, Betty M Drees, James J Hamilton, David Meyre, Jerome Delplanque, Yu-Fang Pei, Lei Zhang, Robert R Recker, Philippe Froguel, Hong-Wen Deng
  • SNPbox: web-based high-throughput primer design from gene to genome.
    Nucleic Acids Res, Vol. 32, No. Web Server issue. (1 July 2004)
  • A Single IGF1 Allele Is a Major Determinant of Small Size in Dogs
    Science, Vol. 316, No. 5821. (6 April 2007), pp. 112-115.
    by Nathan B Sutter, Carlos D Bustamante, Kevin Chase, Melissa M Gray, Keyan Zhao, Lan Zhu, Badri Padhukasahasram, Eric Karlins, Sean Davis, Paul G Jones, Pascale Quignon, Gary S Johnson, Heidi G Parker, Neale Fretwell, Dana S Mosher, Dennis F Lawler, Ebenezer Satyaraj, Magnus Nordborg, Gordon K Lark, Robert K Wayne, Elaine A Ostrander
  • 'Deep phenotyping': characterizing populations in the era of genomics and systems biology.
    Current opinion in lipidology, Vol. 19, No. 2. (April 2008), pp. 151-157.
    by RP Tracy
  • Everything you wanted to know about small RNA but were afraid to ask
    Laboratory Investigation, Vol. doi: 10.1038/labinvest.2008.32 (2008)
    by SD Boyd
  • De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer.
    Genome Res (10 March 2008)
    by David Hernandez, Patrice Francois, Laurent Farinelli, Magne Osteras, Jacques Schrenzel
  • From gene expression to disease risk
    Nature Genetics, Vol. 40, No. 5., pp. 492-493.
    by Emmanouil T Dermitzakis
  • Mapping and sequencing of structural variation from eight human genomes
    Nature, Vol. 453, No. 7191., pp. 56-64.
    by Jeffrey M Kidd, Gregory M Cooper, William F Donahue, Hillary S Hayden, Nick Sampas, Tina Graves, Nancy Hansen, Brian Teague, Can Alkan, Francesca Antonacci, Eric Haugen, Troy Zerr, Alice N Yamada, Peter Tsang, Tera L Newman, Eray Tüzün, Ze Cheng, Heather M Ebling, Nadeem Tusneem, Robert David, Will Gillett, Karen A Phelps, Molly Weaver, David Saranga, Adrianne Brand, Wei Tao, Erik Gustafson, Kevin Mckernan, Lin Chen, Maika Malig, Joshua D Smith, Joshua M Korn, Steven A Mccarroll, David A Altshuler, Daniel A Peiffer, Michael Dorschner, John Stamatoyannopoulos, David Schwartz, Deborah A Nickerson, James C Mullikin, Richard K Wilson, Laurakay Bruhn, Maynard V Olson, Rajinder Kaul, Douglas R Smith, Evan E Eichler
  • The Diploid Genome Sequence of an Individual Human
    PLoS Biology, Vol. 5, No. 10. (1 October 2007), e254.
    by Samuel Levy, Granger Sutton, Pauline C Ng, Lars Feuk, Aaron L Halpern, Brian P Walenz, Nelson Axelrod, Jiaqi Huang, Ewen F Kirkness, Gennady Denisov, Yuan Lin, Jeffrey R Macdonald, Andy W Pang, Mary Shago, Timothy B Stockwell, Alexia Tsiamouri, Vineet Bafna, Vikas Bansal, Saul A Kravitz, Dana A Busam, Karen Y Beeson, Tina C Mcintosh, Karin A Remington, Josep F Abril, John Gill, Jon Borman, Yu-Hui Rogers, Marvin E Frazier, Stephen W Scherer, Robert L Strausberg, Craig J Venter
  • Exploring functional genomics for the development of novel intervention strategies against tuberculosis
    International Journal of Medical Microbiology, Vol. 297, No. 7-8. (12 November 2007), pp. 559-567.
    by Helmy Rachman, Stefan H Kaufmann
  • Patchwork People
    Nature, Vol. 437 (2005), pp. 1084-1086.
    by E Check
  • Evolution of anatomy and gene control
    Nature, Vol. 451 (2008), pp. 658-663.
  • Molecular evolutionary clock and the neutral theory
    Journal of Molecular Evolution, Vol. 26, No. 1. (1 November 1987), pp. 24-33.
    by Motoo Kimura
  • Primate molecular divergence dates
    Molecular Phylogenetics and Evolution, Vol. 41, No. 2. (November 2006), pp. 384-394.
    by Michael E Steiper, Nathan M Young
  • Sociogenomics: social life in molecular terms.
    Nat Rev Genet, Vol. 6, No. 4. (April 2005), pp. 257-270.
  • Genetics of global gene expression
    Nature Reviews Genetics, Vol. 7, No. 11., pp. 862-872.
    by Matthew V Rockman, Leonid Kruglyak
  • Application of Functional Genomics to Bronchial Asthma
    Current Pharmacogenomics, Vol. 2, No. 4., 351.
  • Multiplex amplification of large sets of human exons
    Nature Methods, Vol. 4, No. 11. (14 October 2007), pp. 931-936.
    by Gregory J Porreca, Kun Zhang, Jin B Li, Bin Xie, Derek Austin, Sara L Vassallo, Emily M Leproust, Bill J Peck, Christopher J Emig, Fredrik Dahl, Yuan Gao, George M Church, Jay Shendure
  • Mechanisms of site-specific recombination.
    Annu Rev Biochem, Vol. 75 (2006), pp. 567-605.
    by ND Grindley, KL Whiteson, PA Rice
  • On the role of unequal exchange in the containment of transposable element copy number.
    Genet Res, Vol. 52, No. 3. (December 1988), pp. 223-235.
  • Human Genome Ultraconserved Elements Are Ultraselected
    Science, Vol. 317, No. 5840. (17 August 2007), 915.
    by Sol Katzman, Andrew D Kern, Gill Bejerano, Ginger Fewell, Lucinda Fulton, Richard K Wilson, Sofie R Salama, David Haussler
  • Deletion of Ultraconserved Elements Yields Viable Mice
    PLoS Biology, Vol. 5, No. 9. (1 September 2007), e234.
    by Nadav Ahituv, Yiwen Zhu, Axel Visel, Amy Holt, Veena Afzal, Len A Pennacchio, Edward M Rubin
  • Ancestral reconstruction of segmental duplications reveals punctuated cores of human genome evolution.
    Nature, Vol. 39, No. 11. (2007), pp. 1361-1368.
  • Psoriasis is associated with increased -defensin genomic copy number.
    Nature, Vol. 40, No. 1. (2008), pp. 23-25.
  • Recent segmental duplications in the human genome.
    Science, Vol. 297, No. 5583. (9 August 2002), pp. 1003-1007.
    by JA Bailey, Z Gu, RA Clark, K Reinert, RV Samonte, S Schwartz, MD Adams, EW Myers, PW Li, EE Eichler
  • Essential genes of a minimal bacterium
    PNAS, Vol. 103, No. 2. (10 January 2006), pp. 425-430.
    by John I Glass, Nacyra Assad-Garcia, Nina Alperovich, Shibu Yooseph, Matthew R Lewis, Mahir Maruf, Clyde A Hutchison, Hamilton O Smith, Craig J Venter
  • Structural variation in the human genome
    Nature Reviews Genetics, Vol. 7, No. 2. (2006), pp. 85-97.
    by Lars Feuk, Andrew R Carson, Stephen W Scherer
  • Loss of LINE-1 Activity in the Megabats
    Genetics, Vol. 178, No. 1. (1 January 2008), pp. 393-404.
    by Michael A Cantrell, Luann Scott, Celeste J Brown, Armando R Martinez, Holly A Wichman
  • Genetically Determined Differences in Learning from Errors
    Science, Vol. 318 (2007), 1642.
  • Emergence of young human genes after a burst of retroposition in primates.
    PLoS Biology, Vol. 3, No. 11. (2005), e357.
  • Evolution of Duplicate Gene Expression in Polyploid and Hybrid Plants
    J Hered, Vol. 98, No. 2. (1 March 2007), pp. 136-141.
    by Keith L Adams
  • Remarkable compartmentalization of transposable elements and pseudogenes in the heterochromatin of the Tetraodon nigroviridis genome.
    Proc Natl Acad Sci U S A, Vol. 99, No. 21. (15 October 2002), pp. 13636-13641.
  • Extensive low-affinity transcriptional interactions in the yeast genome.
    Genome Res (29 June 2006)
    by Amos Tanay
  • Practical Strategies for Discovering Regulatory DNA Sequence Motifs
    PLoS Computational Biology, Vol. 2, No. 4. (1 April 2006), e36.
    by Kenzie D Macisaac, Ernest Fraenkel
  • Human cis natural antisense transcripts initiated by transposable elements.
    Trends Genet (11 January 2008)
    by Andrew B B Conley, Wolfgang J J Miller, I King K Jordan
  • Microevolutionary divergence pattern of the segmentation gene hunchback in Drosophila.
    Mol Biol Evol, Vol. 15, No. 11. (November 1998), pp. 1403-1411.
    by D Tautz, L Nigro
  • Inferring genome-scale rearrangement phylogeny and ancestral gene order: A Drosophila case study
    Genome Biology, Vol. 8 (08 November 2007), R236.
    by Arjun Bhutkar, William M Gelbart, Temple F Smith
  • Genomics of the evolutionary process
    Trends in Ecology & Evolution, Vol. 21, No. 6. (June 2006), pp. 316-321.
    by Andrew G Clark
  • Alternative splicing: current perspectives
    BioEssays, Vol. 30, No. 1. (2008), pp. 38-47.
    by Eddo Kim, Amir Goren, Gil Ast
  • A genomic view of alternative splicing.
    Nat Genet, Vol. 30, No. 1. (January 2002), pp. 13-19.
    by B Modrek, C Lee
  • A MicroRNA Signature of Hypoxia.
    Mol Cell Biol (28 December 2006)
    by Ritu Kulshreshtha, Manuela Ferracin, Sylwia E E Wojcik, Ramiro Garzon, Hansjuerg Alder, Francisco J J Agosto-Perez, Ramana Davuluri, Chang-Gong G Liu, Carlo M M Croce, Massimo Negrini, George A A Calin, Mircea Ivan
  • MicroRNA Responses to Cellular Stress.
    Cancer Res, Vol. 66, No. 22. (15 November 2006), pp. 10843-10848.
    by Carmen J J Marsit, Karen Eddy, Karl T T Kelsey
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