barry's core_structure [15 articles] Export

Recent papers added to barry's library classified by the tag core_structure. You can also see everyone's core_structure.

Hide details

	Multivariate Analysis of Conserved Sequence-Structure Relationships in Kinesins: Coupling of the Active Site and a Tubulin-binding Sub-domain [My Copy] Journal of Molecular Biology, Vol. 368, No. 5. (18 May 2007), pp. 1231-1248. by Barry J. Grant, Andrew J. Mccammon, Leo S. Caves, Robert A. Cross posted to bioinf_methods clustering core_structure correlated_motions domain_motions kinesin mine molecular_motors ntpases p-loop pca protein_dynamics protein_sequence protein_structure r sca structural_bioinformatics swi-swii torsion_angles by barry on 2007-04-27 17:41:06 as along with 3 people and 2 groups choonpeng cactus insectopalo structural_bioinformatics Bioinformatics
	Atom depth in protein structure and function. [My Copy] Trends Biochem Sci, Vol. 28, No. 11. (November 2003), pp. 593-597. by A. Pintar, O. Carugo, S. Pongor posted to protein_structure protein_packing core_structure by barry on 2007-02-06 19:23:55 as along with 2 people and 2 groups hryk lna structural_bioinformatics Bioinformatics
	Hydrophobic Core Fluidity of Homologous Protein Domains: Relation of Side-Chain Dynamics to Core Composition and Packing [My Copy] Biochemistry, Vol. 43, No. 5. (10 February 2004), pp. 1145-1155. by R. B. Best, T. J. Rutherford, S. M. V. Freund, J. Clarke posted to core_residues core_structure correlated_motions protein_dynamics protein_packing protein_structure by barry on 2006-11-15 19:14:54 as along with 2 groups structural_bioinformatics Bioinformatics
	An automated approach for defining core atoms and domains in an ensemble of NMR-derived protein structures. [My Copy] Protein Eng, Vol. 10, No. 6. (June 1997), pp. 737-741. by L. A. Kelley, S. P. Gardner, M. J. Sutcliffe posted to core_residues core_structure protein_dynamics protein_structure by barry on 2006-10-06 03:17:24 as along with 2 groups structural_bioinformatics Bioinformatics
	The packing density in proteins: standard radii and volumes1 [My Copy] Journal of Molecular Biology, Vol. 290, No. 1. (02 July 1999), pp. 253-266. by Jerry Tsai, Robin Taylor, Cyrus Chothia, Mark Gerstein posted to core_structure protein_design protein_packing protein_structure by barry on 2006-09-29 19:28:21 as along with 6 people and 3 groups sebk ana bicko blackbart medic0747 sobolevnrm structural_bioinformatics Bioinformatics baker-group
	Local complexity of amino acid interactions in a protein core. [My Copy] Proc Natl Acad Sci U S A, Vol. 101, No. 1. (6 January 2004), pp. 111-116. by R. K. Jain, R. Ranganathan posted to core_residues core_structure correlated_mutations protein_design protein_structure by barry on 2006-09-29 19:24:22 as along with 5 people and 4 groups ana lna marcius gbart choonpeng structural_bioinformatics Bioinformatics BioinfoCIPF SGU-CIPF
	How different amino acid sequences determine similar protein structures: The structure and evolutionary dynamics of the globins [My Copy] Journal of Molecular Biology, Vol. 136, No. 3. (25 January 1980), pp. 225-230. by Arthur M. Lesk, Cyrus Chothia posted to core_residues core_structure protein_design protein_evolution protein_sequence protein_structure sequence_comparison structure_comparison by barry on 2006-09-29 19:18:54 as along with 2 people and 4 groups ana marcius structural_bioinformatics Bioinformatics BioinfoCIPF SGU-CIPF
	CHORAL: a differential geometry approach to the prediction of the cores of protein structures. [My Copy] Bioinformatics, Vol. 21, No. 19. (1 October 2005), pp. 3719-3725. by R. W. Montalvão, R. E. Smith, S. C. Lovell, T. L. Blundell posted to bioinf_methods comparative_model core_residues core_structure protein_structure by barry on 2006-03-06 22:23:24 as along with 3 people and 2 groups olso ana medic0747 structural_bioinformatics Bioinformatics
	Objective comparison of protein structures: error-scaled difference distance matrices. [My Copy] Acta Crystallogr D Biol Crystallogr, Vol. 56 ( Pt 6) (June 2000), pp. 714-721. by T. R. Schneider posted to core_structure distance_matrices protein_structure by barry on 2006-02-23 02:11:29 as along with 2 people and 2 groups ana pansapiens structural_bioinformatics Bioinformatics
	Domain identification by iterative analysis of error-scaled difference distance matrices [My Copy] Acta Crystallographica Section D: Biological Crystallography, Vol. 60, No. 1. (01 December 2004), pp. 2269-2275. by Schneider, T.R. posted to bioinf_methods core_structure distance_matrices domain_motions by barry on 2006-02-23 02:01:05 as along with 2 groups structural_bioinformatics Bioinformatics
	Topological Determinants of Protein Domain Swapping [My Copy] Structure, Vol. 14, No. 1. (January 2006), pp. 5-14. by Feng Ding, Kirk C. Prutzman, Sharon L. Campbell, Nikolay V. Dokholyan posted to contacts core_structure domain_motions domain_swapping networks protein_dynamics protein_folding protein_structure by barry on 2006-01-16 20:12:22 as along with 2 groups structural_bioinformatics Bioinformatics
	Toward High-Resolution de Novo Structure Prediction for Small Proteins [My Copy] Science, Vol. 309, No. 5742. (16 September 2005), pp. 1868-1871. by Philip Bradley, Kira M. S. Misura, David Baker posted to comparative_model core_structure protein_design by barry on 2005-09-16 19:05:11 as along with 11 people and 4 groups ucbcjbm paddydu kgutwin BragilMassoud ana thaliana jwm vavi marcius gbart thamelry structural_bioinformatics Bioinformatics BioinfoCIPF SGU-CIPF
	Protein families and their evolution-a structural perspective. [My Copy] Annu Rev Biochem, Vol. 74 (2005), pp. 867-900. by C. A. Orengo, J. M. Thornton posted to core_structure fold_space protein_evolution protein_sequence protein_structure review sequence_comparison structure_comparison by barry on 2005-09-13 19:39:01 as along with 20 people and 6 groups krapnik dfdong ucbcjbm flbarroso kumar_physics yuslinaz ssgong ana tjimenez jwm chad_davis Einat Schmidtc marcius sriram_s ezotenko redelings medic0747 nigham sim82 structural_bioinformatics Radiation_Damage Stressosome Bioinformatics BioinfoCIPF SGU-CIPF
	Finding an average core structure: application to the globins. [My Copy] Proc Int Conf Intell Syst Mol Biol, Vol. 2 (1994), pp. 19-27. by R. B. Altman, M. Gerstein posted to core_residues core_structure protein_structure structural_bioinformatics structure_comparison by barry on 2005-06-08 18:45:13 as along with 2 groups structural_bioinformatics Bioinformatics
	Average core structures and variability measures for protein families: application to the immunoglobulins. [My Copy] J Mol Biol, Vol. 251, No. 1. (4 August 1995), pp. 161-175. by M. Gerstein, R. B. Altman posted to core_residues core_structure protein_structure structure_comparison by barry on 2005-06-08 01:04:23 as along with 2 groups structural_bioinformatics Bioinformatics

Note: You may cite this page as: http://www.citeulike.org/user/barry/tag/core_structure

protein_structure	279
review	194
molecular_motors	191
kinesin	145
protein_dynamics	132
md_simulation	95
protein_sequence	83
bioinf_methods	77
protein_protein	77
protein_evolution	69
protein_design	66
nma	51
structure_comparison	46
structural_bioinformatics	45
cytoskeleton	44
tubulin	42
allosteric	39
bd_simulation	39
myosin	37
electrostatics	34
pca	31
dynein	29
drug_design	28
ctbp	27
sequence_comparison	24
ras	23
eg5	23
correlated_mutations	22
nmr	21
motor_model	20
kinases	19
protein_folding	19
monastrol	18
domain_motions	18
docking	17
clustering	17
g_proteins	17
coarse_grain	17
core_structure	15
bioinformatics	15
ntpases	14
correlated_motions	14
career	13
networks	13
protein_ligand	13
contacts	12
comparative_model	12
p-loop	12
hbond	11
core_residues	11
fold_space	10
free_energy	9
transcription_factor	9
mts	9
general	9
gotit	9
aaa	9
torsion_angles	8
sca	8
pdz	8
protein_packing	8
conformational_selection	8
small_world	8
protein_fragments	8
mine	8
mitosis	7
r	7
dehydron	7
nachr	7
cargo_attachment	7
distance_matrices	6
cell_cycle_inhibitors	6
ion_channels	6
cryo_em	6
actin	6
drug_discovery	6
phylogeny	5
inhibitor_design	5
microarrays	5
replica_exchange	5
binding	5
mutants	5
hsp90	4
adk	4
ncd	4
myovi	4
allostery	4
cancer	4
ribosome	4
smd	4
myov	3
swi-swii	3
gpcr	3
alex	3
chagas	3
accelerated_md	3
groel	3
test	3
neck_linker	3
ion_pairs	3
adh	3
membranes	3
poster	3
protein-ligand	3
guide	3
nadp	3
cath	3
svm	3
genomic_context	3
server	3
dynamic_similarity	3
residue_annotation	3
itc	3
protein-protein	3
kif1a	3
function_prediction	3
kin14_kar3	3
protein_function	3
structure_refinement	3
tropical_diseases	3
coarse-grained	3
kin13	3
nucleotide_analogues	2
rna_polymerase	2
protein_dna	2
bayesian_classifiers	2
pmf	2
disorder	2
hinge_motion	2
motor_mode	2
kini	2
malaria	2
clipx	2
time_series_analysis	2
rho	2
ksca	2
ion_channel	2
student	2
go_model	2
membrane_proteins	2
solvent	2
sequence_motif	2
interaction_maps	2
graph	2
beta_sheet	2
subfamily	2
coiled_coil	2
structure_determination	2
dna_motor	2
ntp	2
nfkb	2
achr	2
rab	2
fret-fiona	2
epr	2
kin8	2
pka	2
arf	2
advice	2
ikk	2
mm-pbsa	2
journal_club	2
sampling	2
titration	2
documentation	2
amber	2
neural_net	2
solvation	2
pxdls	2
helix_helix	2
brownian_dynamics	2
kin-mtl	1
ef-tu	1
cracking	1
nadh	1
siginal_transduction	1
for_ana	1
gene_ontology	1
jc	1
em	1
gene_finding	1
conformational_search	1
ubiqutin	1
doublecortin	1
crystal_packing	1
nemo	1
gaba	1
gene_expression	1
gdh	1
multiscale	1
scop	1
kinesin_tail	1
bacteriorhodopsin	1
alpha_actinin	1
pdb	1
md	1
hiv	1
domain_swapping	1
rabkinesin	1
afp	1
molecular_moters	1
decision_trees	1
wireing_digrams	1
directed_evolution	1
roc	1
f1atpase	1
nice_figure	1
diffusion	1
transition_state	1
metadynamics	1
superamolecular	1
book2get	1
arp3	1
cis_trans	1
sas	1
gpus	1
phosphorylation	1
gene_duplication	1
sheer_motion	1
single_molecule	1
protein_stability	1
comparative_genomics	1
fold	1
protein_strcture	1
programming	1
rna	1
genome	1
alanine_scanning	1
species_evolution	1
catalytic_mechanism	1
hydrophobic	1
helicases	1
wavelets	1
landscapes	1
antiviral_drugs	1
mdh	1
kar3	1
hydrodynamics	1
ptms	1
discussion_free_energy	1
induced_fit	1
citrate_synthase	1
similarity	1
ran	1
cloud_computing	1
epitopes	1
flu	1
alzheimers	1
sequence_conservation	1
literature	1
mmp	1
virus	1
kin_loop5	1
tyrosine_phosphatases	1
qm	1
teaching	1
ff99sb	1
structural_genomics	1
essay	1
systems_biology	1
ftsz	1
hoh	1
convergent_evolution	1
fad	1
mg	1
hiv_integrase	1
flagellar_motor	1
tyrosine_kinase	1
pgdh	1
hiv_rt	1
docking_refinement	1
protein_conformation	1
hsp104	1
rafts	1
smallrna	1
chromokinesin	1
abc	1
force_field	1
kinetochores	1
mcak	1
fret	1
complexity	1
qm_mm	1
funding	1
kinetics	1
protein_annotation	1
proline	1
hot_spots	1
wham	1
umbrella	1
membrane	1
bpti	1
nad	1
gfp	1
loop_modeling	1
sos	1
pathways	1
ef-g	1
rna_dynamics	1
pcna	1
promoter_identification	1
residue_effect	1
perl	1
hiv_protease	1
afm	1
peptides	1
flagella	1
protein_engineering	1
immunology	1
torsion	1
kinesin_neck	1
protonation	1
pcp	1
virulence_factors	1
antibodys	1
imp_dehydrogenase	1
power_law	1
chip-chip	1
hsp70	1
promoter_finding	1
cftr	1
structure_alignment	1
sequencing	1
fdh	1
ldh	1
coevolution	1
aaindex	1
farnesyltransferase	1
motor_cargo	1

barry's core_structure [15 articles] Export

barry's tags