barry's correlated_motions [14 articles] Export Sort

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	Quantifying Correlations Between Allosteric Sites in Thermodynamic Ensembles [My Copy] Journal of Chemical Theory and Computation, Vol. 5, No. 9. (8 September 2009), pp. 2486-2502. by Christopher L. McClendon, Gregory Friedland, David L. Mobley, Homeira Amirkhani, Matthew P. Jacobson posted to md_simulation correlated_motions bioinf_methods by barry on 2009-12-14 01:42:31 as along with 4 people and 1 group jmccammon anuragsethi pmung acpan McCammon
	Complexes of HIV-1 integrase with HAT proteins: multiscale models, dynamics, and hypotheses on allosteric sites of inhibition. [My Copy] Proteins, Vol. 76, No. 4. (September 2009), pp. 946-958. by Armida Di Fenza, Walter Rocchia, Valentina Tozzini posted to coarse_grain correlated_motions hiv_integrase by barry on 2009-08-07 00:09:13 as along with 1 group McCammon
	How does activation loop phosphorylation modulate catalytic activity in the cAMP-dependent protein kinase: A theoretical study. [My Copy] Protein Sci (7 March 2006) by Yuhui Cheng, Yingkai Zhang, J Andrew A. McCammon posted to correlated_motions kinases md_simulation pca phosphorylation by barry on 2007-10-12 01:11:45 as along with 1 person and 1 group nknii TCR_Signaling
	Insights into Correlated Motions and Long-Range Interactions in CheY Derived from Molecular Dynamics Simulations. [My Copy] Biophys J, Vol. 92, No. 6. (15 March 2007), pp. 2062-2079. by M. H. Knaggs, F. R. Salsbury, M. H. Edgell, J. S. Fetrow posted to contacts correlated_motions md_simulation by barry on 2007-10-12 01:04:36 as along with 1 person choonpeng
	Signal Propagation in Proteins and Relation to Equilibrium Fluctuations [My Copy] PLoS Computational Biology, Vol. 3, No. 9. (1 September 2007), e172. by Chakra Chennubhotla,, Ivet Bahar, posted to allosteric correlated_motions nma protein_dynamics protein_structure time_series_analysis by barry on 2007-09-22 23:29:36 as along with 2 people and 2 groups mittinatten apaydin structural_bioinformatics Bioinformatics
	How Well Can We Understand Large-Scale Protein Motions Using Normal Modes of Elastic Network Models? [My Copy] Biophys J (4 May 2007) by Lei Yang, Guang Song, Robert L L. Jernigan posted to correlated_motions nma protein_dynamics protein_structure by barry on 2007-08-13 19:53:33 as along with 3 people and 2 groups aqeel choonpeng willpitt structural_bioinformatics Bioinformatics
	Are There Non-trivial Dynamic Cross-correlations in Proteins? [My Copy] pp. 911-920. by R. Abseher posted to correlated_motions distance_matrices pca by barry on 2007-07-26 02:50:50 as along with 2 groups structural_bioinformatics Bioinformatics
	Molecular dynamics study of time-correlated protein domain motions and molecular flexibility: cytochrome P450BM-3. [My Copy] Biophys. J., Vol. 73, No. 3. (1 September 1997), pp. 1147-1159. by G. E. Arnold, R. L. Ornstein posted to correlated_motions distance_matrices md_simulation protein_sequence by barry on 2007-07-26 02:46:16 as along with 2 groups structural_bioinformatics Bioinformatics
	Multivariate Analysis of Conserved Sequence-Structure Relationships in Kinesins: Coupling of the Active Site and a Tubulin-binding Sub-domain [My Copy] Journal of Molecular Biology, Vol. 368, No. 5. (18 May 2007), pp. 1231-1248. by Barry J. Grant, Andrew J. Mccammon, Leo S. Caves, Robert A. Cross posted to bioinf_methods clustering core_structure correlated_motions domain_motions kinesin mine molecular_motors ntpases p-loop pca protein_dynamics protein_sequence protein_structure r sca structural_bioinformatics swi-swii torsion_angles by barry on 2007-04-27 17:41:06 as along with 3 people and 2 groups choonpeng cactus insectopalo structural_bioinformatics Bioinformatics
	Hydrophobic Core Fluidity of Homologous Protein Domains: Relation of Side-Chain Dynamics to Core Composition and Packing [My Copy] Biochemistry, Vol. 43, No. 5. (10 February 2004), pp. 1145-1155. by R. B. Best, T. J. Rutherford, S. M. V. Freund, J. Clarke posted to core_residues core_structure correlated_motions protein_dynamics protein_packing protein_structure by barry on 2006-11-15 19:14:54 as along with 2 groups structural_bioinformatics Bioinformatics
	On Evolutionary Conservation of Thermodynamic Coupling in Proteins [My Copy] Journal of Biological Chemistry, Vol. 279, No. 18. (30 April 2004), pp. 19046-19050. by Anthony A. Fodor, Richard W. Aldrich posted to contacts correlated_motions correlated_mutations pdz sequence_comparison by barry on 2006-01-25 04:17:37 as along with 8 people and 2 groups dfdong ana gbart cjeans tale friendpine ca3295 Lombardo_7 structural_bioinformatics Bioinformatics
	Intramolecular Signaling Pathways Revealed by Modeling Anisotropic Thermal Diffusion [My Copy] Journal of Molecular Biology, Vol. 351, No. 2. (12 August 2005), pp. 345-354. by Nobuyuki Ota, David A. Agard posted to allosteric contacts correlated_motions correlated_mutations md_simulation by barry on 2006-01-24 18:24:55 as along with 3 people and 2 groups pansapiens lna choonpeng structural_bioinformatics Bioinformatics
	Statistical coevolution analysis and molecular dynamics: identification of amino acid pairs essential for catalysis. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 4. (25 January 2005), pp. 994-999. by R. A. Estabrook, J. Luo, M. M. Purdy, et al.V. Sharma, P. Weakliem, T. C. Bruice, N. O. Reich posted to correlated_motions correlated_mutations protein_design protein_dynamics protein_evolution by barry on 2005-10-26 00:16:13 as along with 5 people and 2 groups dfdong ana pansapiens dimka gbart structural_bioinformatics Bioinformatics
	Identification of slow correlated motions in proteins using residual dipolar and hydrogen-bond scalar couplings. [My Copy] Proc Natl Acad Sci U S A (19 September 2005) by Guillaume Bouvignies, Pau Bernadó, Sebastian Meier, et al.Kyuil Cho, Stephan Grzesiek, Rafael Brüschweiler, Martin Blackledge posted to correlated_motions nmr protein_dynamics by barry on 2005-10-08 00:45:51 as along with 2 people and 2 groups apaydin Guyhiom structural_bioinformatics Bioinformatics

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barry's correlated_motions [14 articles] Export Sort

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