barry's molecular_motors [190 articles] Export

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	Single molecule imaging reveals differences in microtubule track selection between Kinesin motors. [My Copy] PLoS biology, Vol. 7, No. 10. (October 2009) by Dawen Cai, Dyke P. McEwen, Jeffery R. Martens, Edgar Meyhofer, Kristen J. Verhey posted to mts molecular_motors kinesin bd_simulation by barry on 2009-10-15 18:11:23 as
	Engineered Myosin VI Motors Reveal Minimal Structural Determinants of Directionality and Processivity. [My Copy] Journal of molecular biology (22 July 2009) by Jung-Chi C. Liao, Mary Williard W. Elting, Scott L. Delp, James A. Spudich, Zev Bryant posted to molecular_motors myosin protein_structure by barry on 2009-08-07 00:05:27 as along with 1 person melting
	How kinesin waits between steps [My Copy] Nature (14 November 2007) by Teppei Mori, Ronald D. Vale, Michio Tomishige posted to kinesin molecular_motors by barry on 2009-05-20 01:16:55 as along with 3 people benlin cjeans cactus
	Brownian search-and-catch mechanism for myosin-VI steps [My Copy] Nat Chem Biol, Vol. 5, No. 6. (June 2009), pp. 403-405. by Mitsuhiro Iwaki, Atsuko H. Iwane, Tetsuya Shimokawa, Roger Cooke, Toshio Yanagida posted to bd_simulation molecular_motors myosin by barry on 2009-05-20 01:15:02 as
	Identification of a strong binding site for kinesin on the microtubule using mutant analysis of tubulin [My Copy] The EMBO Journal, Vol. aop, No. current. (23 November 2006) by Seiichi Uchimura, Yusuke Oguchi, Miho Katsuki, et al.Takeo Usui, Hiroyuki Osada, Jun-Ichi Nikawa, Shin'ichi Ishiwata, Etsuko Muto posted to bd_simulation kinesin molecular_motors tubulin by barry on 2009-05-13 21:44:38 as along with 1 group McCammon
	Dissection of Kinesin's Processivity [My Copy] PLoS ONE, Vol. 4, No. 2. (26 February 2009), e4612. by Sarah Adio, Johann Jaud, Bettina Ebbing, Matthias Rief, Günther Woehlke posted to kinesin molecular_motors neck_linker by barry on 2009-04-21 07:05:07 as along with 2 people and 1 group melting skoch3 Koch_Lab
	The diffusive interaction of microtubule binding proteins [My Copy] Current Opinion in Cell Biology, Vol. 21, No. 1. (February 2009), pp. 68-73. by Jeremy R. Cooper, Linda Wordeman posted to bd_simulation molecular_motors mts review by barry on 2009-03-12 18:31:43 as along with 1 group McCammon
	Microtubule Interaction Site of the Kinesin Motor [My Copy] Cell, Vol. 90, No. 2. (July 1997), pp. 207-216. by G. Woehlke posted to alanine_scanning kinesin molecular_motors by barry on 2009-03-07 00:53:47 as
	High-resolution cryo-EM maps show the nucleotide binding pocket of KIF1A in open and closed conformations [My Copy] The EMBO Journal, Vol. aop, No. current. (31 August 2006) by Masahide Kikkawa, Nobutaka Hirokawa posted to cryo_em kinesin molecular_motors protein_structure by barry on 2009-02-25 23:36:30 as along with 1 person qwermish
	The beginning of kinesin's force-generating cycle visualized at 9-A resolution. [My Copy] J Cell Biol, Vol. 177, No. 3. (7 May 2007), pp. 377-385. by C. V. Sindelar, K. H. Downing posted to cryo_em kinesin molecular_motors mts protein_structure by barry on 2009-02-25 23:21:00 as along with 1 person qwermish
	Nucleotide-Induced Flexibility Change in Neck Linkers in Dimeric Kinesin as Detected by Distance Measurements Using Spin-Labeling EPR. [My Copy] Journal of molecular biology (6 January 2009) by Kazunori Sugata, Likai Song, Motoyoshi Nakamura, Shoji Ueki, Piotr G G. Fajer, Toshiaki Arata posted to epr kinesin molecular_motors neck_linker by barry on 2009-01-24 21:23:20 as
	Kinesin's cover-neck bundle folds forward to generate force. [My Copy] Proceedings of the National Academy of Sciences of the United States of America (1 December 2008) by Ahmad S S. Khalil, David C C. Appleyard, Anna K K. Labno, et al.Adrien Georges, Martin Karplus, Angela M M. Belcher, Wonmuk Hwang, Matthew J J. Lang posted to kinesin molecular_motors by barry on 2008-12-06 00:39:52 as
	On helicases and other motor proteins [My Copy] Current Opinion in Structural Biology In Theory and simulation / Macromolecular assemblages, Vol. 18, No. 2. (April 2008), pp. 243-257. by Eric J. Enemark, Leemor Joshua-Tor posted to helicases molecular_motors p-loop review by barry on 2008-10-02 19:40:39 as along with 2 people aip Iliak
	Extensive Conformational Transitions Are Required to Turn On ATP Hydrolysis in Myosin [My Copy] Journal of Molecular Biology, Vol. 381, No. 5. (19 September 2008), pp. 1407-1420. by Yang Yang, Haibo Yu, Qiang Cui posted to md_simulation molecular_motors motor_model myosin qm by barry on 2008-08-18 20:21:10 as along with 1 person and 2 groups okapi Bioinformatics structural_bioinformatics
	The Role of Kinesin Neck Linker and Neck in Velocity Regulation [My Copy] Journal of Molecular Biology, Vol. 382, No. 1. (26 September 2008), pp. 127-135. by Nikolina Kalchishkova, Konrad J. Böhm posted to kinesin molecular_motors neck_linker by barry on 2008-08-18 19:40:35 as
	Allosteric Communication in Myosin V: From Small Conformational Changes to Large Directed Movements [My Copy] PLoS Comput Biol, Vol. 4, No. 8. (2008), e1000129. by M. Cecchini, A. Houdusse, M. Karplus posted to molecular_motors myosin nma by barry on 2008-08-15 19:17:16 as along with 2 people okapi aqeel
	Cargo transport: molecular motors navigate a complex cytoskeleton [My Copy] Current Opinion in Cell Biology In Cell structure and dynamics, Vol. 20, No. 1. (February 2008), pp. 41-47. by Jennifer L. Ross, Yusuf M. Ali, David M. Warshaw posted to cargo_attachment dynein kinesin molecular_motors review by barry on 2008-07-18 19:50:57 as along with 2 people stk skv
	Conformational dynamics of loops L11 and L12 of kinesin as revealed by spin-labeling EPR [My Copy] Biochemical and Biophysical Research Communications, Vol. 364, No. 3. (21 December 2007), pp. 620-626. by Masafumi D. Yamada, Shinsaku Maruta, Satoshi Yasuda, Kazunori Kondo, Hidekatsu Maeda, Toshiaki Arata posted to epr kinesin molecular_motors protein_protein by barry on 2008-06-02 19:35:08 as
	Predicting Allosteric Communication in Myosin via a Pathway ofConserved Residues [My Copy] Journal of Molecular Biology, Vol. In Press, Accepted Manuscript by Susan Tang, Jung-Chi Liao, Alexander R. Dunn, Russ B. Altman, James A. Spudich, Jeanette P. Schmidt posted to allosteric molecular_motors myosin protein_sequence protein_structure sequence_comparison by barry on 2007-10-31 21:53:37 as along with 5 people and 2 groups choonpeng cactus sobolevnrm jlh64 melting structural_bioinformatics baker-group
	Molecular Determination by Electron Microscopy of the Dynein-Microtubule Complex Structure [My Copy] Journal of Molecular Biology, Vol. 372, No. 5. (5 October 2007), pp. 1320-1336. by Akihiro Narita, Naoko Mizuno, Masahide Kikkawa, Yuichiro Maeda posted to dynein em molecular_motors by barry on 2007-09-17 17:59:59 as along with 1 person and 2 groups pmcarlton structural_bioinformatics Bioinformatics
	Structure of Human Eg5 in Complex with a New Monastrol-based Inhibitor Bound in the R Configuration [My Copy] J. Biol. Chem., Vol. 282, No. 13. (30 March 2007), pp. 9740-9747. by Isabel Garcia-Saez, Salvatore Debonis, Roman Lopez, et al.Fernando Trucco, Bernard Rousseau, Pierre Thuery, Frank Kozielski posted to kinesin molecular_motors monastrol protein_structure by barry on 2007-07-27 02:03:03 as along with 2 groups structural_bioinformatics Bioinformatics
	Multivariate Analysis of Conserved Sequence-Structure Relationships in Kinesins: Coupling of the Active Site and a Tubulin-binding Sub-domain [My Copy] Journal of Molecular Biology, Vol. 368, No. 5. (18 May 2007), pp. 1231-1248. by Barry J. Grant, Andrew J. Mccammon, Leo S. Caves, Robert A. Cross posted to bioinf_methods clustering core_structure correlated_motions domain_motions kinesin mine molecular_motors ntpases p-loop pca protein_dynamics protein_sequence protein_structure r sca structural_bioinformatics swi-swii torsion_angles by barry on 2007-04-27 17:41:06 as along with 3 people and 2 groups choonpeng cactus insectopalo structural_bioinformatics Bioinformatics
	An ATP gate controls tubulin binding by the tethered head of kinesin-1. [My Copy] Science, Vol. 316, No. 5821. (6 April 2007), pp. 120-123. by M. C. Alonso, D. R. Drummond, S. Kain, J. Hoeng, L. Amos, R. A. Cross posted to kinesin molecular_motors motor_model by barry on 2007-04-16 22:21:11 as along with 2 people and 2 groups cactus qwermish structural_bioinformatics Bioinformatics
	Mechanochemical Coupling in the Myosin Motor Domain. I. Insights from Equilibrium Active-Site Simulations [My Copy] PLoS Comput Biol, Vol. 3, No. 2. (9 February 2007), e21. by Haibo Yu, Liang Ma, Yang Yang, Qiang Cui posted to md_simulation molecular_motors myosin pmf by barry on 2007-02-12 23:41:33 as along with 1 person and 2 groups Diego_Prada structural_bioinformatics Bioinformatics
	A "Holistic" Kinesin Phylogeny Reveals New Kinesin Families and Predicts Protein Functions. [My Copy] Mol Biol Cell (15 February 2006) by Bill Wickstead, Keith Gull posted to kinesin molecular_motors phylogeny protein_sequence by barry on 2006-11-29 00:42:26 as along with 1 person and 2 groups kristophe structural_bioinformatics Bioinformatics
	Lucky 13-microtubule depolymerisation by kinesin-13 motors [My Copy] Journal Of Cell Science, Vol. 119, No. Part 19. (1 October 2006), pp. 3905-3913. by Carolyn A. Moores, Ronald A. Milligan posted to kin13 kinesin molecular_motors review by barry on 2006-11-06 20:25:49 as along with 2 groups structural_bioinformatics Bioinformatics
	Single-molecule observations of neck linker conformational changes in the kinesin motor protein [My Copy] Nature Structural & Molecular Biology, Vol. 13, No. 10. (October 2006), pp. 887-894. by Michio Tomishige, Nico Stuurman, Ronald D. Vale posted to kinesin kinesin_neck molecular_motors motor_model by barry on 2006-11-06 20:20:09 as along with 2 groups structural_bioinformatics Bioinformatics
	Microtubule Acetylation Promotes Kinesin-1 Binding and Transport [My Copy] Current Biology, Vol. 16, No. 21. (7 November 2006), pp. 2166-2172. by Nathan A. Reed, Dawen Cai, Lynne T. Blasius, et al.Gloria T. Jih, Edgar Meyhofer, Jacek Gaertig, Kristen J. Verhey posted to cytoskeleton dynein kinesin molecular_motors ptms by barry on 2006-11-06 20:15:55 as along with 2 groups structural_bioinformatics Bioinformatics
	High-resolution cryo-EM maps show the nucleotide binding pocket of KIF1A in open and closed conformations [My Copy] The EMBO Journal, Vol. 25, No. 18. (20 September 2006), pp. 4187-4194. by Masahide Kikkawa, Nobutaka Hirokawa posted to kinesin molecular_motors motor_model mts protein_dynamics by barry on 2006-10-30 19:26:11 as along with 2 groups structural_bioinformatics Bioinformatics
	Flexibility of the Neck Domain Enhances Kinesin-1 Motility under Load [My Copy] Biophys. J., Vol. 91, No. 4. (15 August 2006), pp. 1407-1412. by Johann Jaud, Friederike Bathe, Manfred Schliwa, Matthias Rief, Gunther Woehlke posted to coiled_coil kinesin molecular_motors by barry on 2006-10-30 19:15:45 as along with 2 groups structural_bioinformatics Bioinformatics
	Kinesin moves by an asymmetric hand-over-hand mechanism [My Copy] Science, Vol. 302, No. 5653. (19 December 2003), pp. 2130-2134. by Charles L. Asbury, Adrian N. Fehr, Steven M. Block posted to hoh kinesin molecular_motors motor_model by barry on 2006-10-30 19:05:57 as along with 2 groups structural_bioinformatics Bioinformatics
	Induction of apoptosis by monastrol, an inhibitor of the mitotic kinesin Eg5, is independent of the spindle checkpoint [My Copy] Molecular Cancer Therapeutics, Vol. 5, No. 10. (October 2006), pp. 2580-2591. by Gregory M. Chin, Ronald Herbst posted to cancer eg5 kinesin molecular_motors monastrol by barry on 2006-10-30 18:58:04 as along with 2 groups structural_bioinformatics Bioinformatics
	Proteolytic mapping of kinesin/ncd-microtubule interface: nucleotide-dependent conformational changes in the loops L8 and L12. [My Copy] EMBO J, Vol. 17, No. 4. (16 February 1998), pp. 945-951. by M. C. Alonso, J. van Damme, J. Vandekerckhove, R. A. Cross posted to kinesin molecular_motors ncd protein_structure by barry on 2006-10-23 23:15:07 as along with 2 groups structural_bioinformatics Bioinformatics
	Kinesin-8s: motoring and depolymerizing [My Copy] Nature Cell Biology, Vol. 8, No. 9., pp. 903-905. by Claire E. Walczak posted to kin8 kinesin mitosis molecular_motors review by barry on 2006-09-04 20:12:49 as along with 2 groups structural_bioinformatics Bioinformatics
	In situ structure of the complete Treponema primitia flagellar motor [My Copy] Nature, Vol. 442, No. 7106. (02 August 2006), pp. 1062-1064. by Gavin E. Murphy, Jared R. Leadbetter, Grant J. Jensen posted to flagellar_motor molecular_motors protein_structure by barry on 2006-08-31 23:40:53 as along with 2 groups structural_bioinformatics Bioinformatics
	Identification of dynamical correlations within the myosin motor domain by the normal mode analysis of an elastic network model. [My Copy] J Mol Biol, Vol. 346, No. 3. (25 February 2005), pp. 745-759. by W. Zheng, B. Brooks posted to domain_motions kinesin molecular_motors myosin protein_dynamics by barry on 2006-08-15 19:19:43 as along with 2 people and 2 groups lna aqeel structural_bioinformatics Bioinformatics
	Feedback of the kinesin-1 neck-linker position on the catalytic site [My Copy] The Journal Of Biological Chemistry, Vol. 281, No. 27. (7 July 2006), pp. 18868-18877. by Katrin Hahlen, Bettina Ebbing, Jorg Reinders, Judith Mergler, Albert Sickmann, Guenther Woehlke posted to kinesin molecular_motors by barry on 2006-07-24 19:10:05 as along with 2 groups structural_bioinformatics Bioinformatics
	Molecular dissection of the inhibitor binding pocket of mitotic kinesin Eg5 reveals mutants that confer resistance to antimitotic agents [My Copy] Journal Of Molecular Biology, Vol. 360, No. 2. (7 July 2006), pp. 360-376. by Sebastien Brier, David Lemaire, Salvatore Debonis, Eric Forest, Frank Kozielski posted to drug_design eg5 inhibitor_design kinesin molecular_motors monastrol protein_dynamics protein_sequence protein_structure by barry on 2006-07-24 19:02:13 as along with 2 groups structural_bioinformatics Bioinformatics
	Towards an understanding of kinesin-1 dependent transport pathways through the study of protein-protein interactions [My Copy] Briefings In Functional Genomics & Proteomics, Vol. 5, No. 1. (March 2006), pp. 74-86. by Joseph G. Gindhart posted to kinesin molecular_motors motor_cargo by barry on 2006-07-24 18:59:09 as along with 2 groups structural_bioinformatics Bioinformatics
	Interaction of the mitotic kinesin Eg5 inhibitor monastrol with P-glycoprotein [My Copy] Naunyn-Schmiedeberg's Archives Of Pharmacology, Vol. 372, No. 4. (January 2006), pp. 291-299. by Tanja Peters, Heike Lindenmaier, Walter E. Haefeli, Johanna Weiss posted to drug_design eg5 kinesin molecular_motors monastrol by barry on 2006-07-24 18:50:31 as along with 2 groups structural_bioinformatics Bioinformatics
	Inhibitors of human mitotic kinesin Eg5: Characterization of the 4-phenyl-tetrahydroisoquinoline lead series [My Copy] Bioorganic & Medicinal Chemistry Letters, Vol. 16, No. 8. (15 April 2006), pp. 2095-2100. by Christine M. Tarby, Kaltenbach, Tram Huynh, et al.Andrew Pudzianowski, Henry Shen, Marie Ortega-Nanos, Steven Sheriff, John A. Newitt, Patricia A. Mcdonnell, Neil Burford posted to drug_design eg5 kinesin molecular_motors monastrol by barry on 2006-06-12 19:48:49 as along with 2 groups structural_bioinformatics Bioinformatics
	Conformational change of the loop L5 in rice Kinesin motor domain induced by nucleotide binding [My Copy] Journal Of Biochemistry, Vol. 139, No. 5. (May 2006), pp. 857-864. by Nobuhisa Umeki, Toshiaki Mitsui, Kazunori Kondo, Shinsaku Maruta posted to kin_loop5 kinesin molecular_motors protein_dynamics protein_structure by barry on 2006-06-12 19:44:32 as along with 2 groups structural_bioinformatics Bioinformatics
	Comprehensive comparative analysis of kinesins in photosynthetic eukaryotes [My Copy] BMC Genomics, Vol. 7 (2006), pp. 18-18. by Dale N. Richardson, Mark P. Simmons, Anireddy S. Reddy posted to kinesin molecular_motors phylogeny protein_evolution protein_sequence by barry on 2006-06-12 19:39:17 as along with 2 groups structural_bioinformatics Bioinformatics
	A structural model for monastrol inhibition of dimeric kinesin Eg5 [My Copy] The EMBO Journal, Vol. 25, No. 10. (17 May 2006), pp. 2263-2273. by Troy C. Krzysiak, Thomas Wendt, Lisa R. Sproul, et al.Peter Tittmann, Heinz Gross, Susan P. Gilbert, Andreas Hoenger posted to eg5 inhibitor_design kinesin molecular_motors monastrol by barry on 2006-06-12 19:32:47 as along with 2 groups structural_bioinformatics Bioinformatics
	Synthesis and SAR of pyrrolotriazine-4-one based Eg5 inhibitors [My Copy] Bioorganic & Medicinal Chemistry Letters, Vol. In Press, Corrected Proof by Kyoung S. Kim, Songfeng Lu, Lyndon A. Cornelius, et al.Louis J. Lombardo, Robert M. Borzilleri, Gretchen M. Schroeder, Christopher Sheng, George Rovnyak, Donald Crews, Robert J. Schmidt posted to eg5 kinesin molecular_motors monastrol by barry on 2006-06-05 19:42:17 as along with 2 groups structural_bioinformatics Bioinformatics
	How kinesins walk, assemble and transport: A birds-eye-view of some unresolved questions [My Copy] Physica A: Statistical Mechanics and its Applications, Vol. In Press, Uncorrected Proof by Krishanu Ray posted to kinesin molecular_motors review by barry on 2006-06-05 19:40:40 as along with 1 person and 2 groups qwermish structural_bioinformatics Bioinformatics
	Molecular motors as cargo transporters in the cell--The good, the bad and the ugly [My Copy] Physica A: Statistical Mechanics and its Applications, Vol. In Press, Uncorrected Proof by Roop Mallik, Steven P. Gross posted to dynein kinesin molecular_motors myosin review by barry on 2006-06-05 19:36:53 as along with 2 groups structural_bioinformatics Bioinformatics
	On the hand-over-hand mechanism of kinesin [My Copy] PNAS, Vol. 103, No. 21. (23 May 2006), pp. 8072-8077. by Qiang Shao, Yi Q. Gao posted to kinesin molecular_motors motor_model by barry on 2006-05-24 23:59:44 as along with 1 person and 2 groups qwermish structural_bioinformatics Bioinformatics
	A pathway of structural changes produced by monastrol binding to Eg5. [My Copy] J Biol Chem, Vol. 281, No. 12. (24 March 2006), pp. 7977-7982. by Z. Maliga, J. Xing, H. Cheung, L. J. Juszczak, J. M. Friedman, S. S. Rosenfeld posted to eg5 kinesin molecular_motors monastrol by barry on 2006-05-18 01:52:00 as along with 2 groups structural_bioinformatics Bioinformatics
	Small-molecule and mutational analysis of allosteric Eg5 inhibition by monastrol [My Copy] BMC Chemical Biology, Vol. 6 (27 February 2006), 2. by Zoltan Maliga, Timothy J. Mitchison posted to eg5 kinesin molecular_motors monastrol by barry on 2006-05-18 01:50:39 as along with 2 groups structural_bioinformatics Bioinformatics

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protein_structure	278
molecular_motors	190
review	190
kinesin	145
protein_dynamics	132
md_simulation	93
protein_sequence	83
protein_protein	77
bioinf_methods	76
protein_evolution	69
protein_design	65
nma	50
structure_comparison	46
structural_bioinformatics	45
cytoskeleton	44
tubulin	42
allosteric	39
bd_simulation	38
myosin	37
electrostatics	34
dynein	29
pca	29
ctbp	27
drug_design	26
sequence_comparison	24
eg5	23
ras	23
correlated_mutations	22
nmr	21
motor_model	20
kinases	19
protein_folding	19
domain_motions	18
monastrol	18
g_proteins	17
clustering	16
docking	16
bioinformatics	15
coarse_grain	15
core_structure	15
ntpases	14
correlated_motions	13
networks	13
protein_ligand	13
career	12
comparative_model	12
p-loop	12
contacts	11
core_residues	11
hbond	11
fold_space	10
free_energy	9
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gotit	9
mts	9
aaa	8
mine	8
pdz	8
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sca	8
small_world	8
torsion_angles	8
transcription_factor	8
cargo_attachment	7
conformational_selection	7
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mitosis	7
nachr	7
r	7
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ion_channels	6
actin	5
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hsp90	4
myovi	4
ncd	4
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alex	3
cath	3
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function_prediction	3
genomic_context	3
gpcr	3
groel	3
guide	3
ion_pairs	3
itc	3
kif1a	3
kin13	3
kin14_kar3	3
membranes	3
myov	3
nadp	3
neck_linker	3
poster	3
protein_function	3
protein-ligand	3
protein-protein	3
residue_annotation	3
server	3
structure_refinement	3
svm	3
swi-swii	3
test	3
tropical_diseases	3
achr	2
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ikk	2
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kin8	2
kini	2
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antibodys	1
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book2get	1
bpti	1
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citrate_synthase	1
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complexity	1
conformational_search	1
convergent_evolution	1
cracking	1
crystal_packing	1
decision_trees	1
diffusion	1
directed_evolution	1
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docking_refinement	1
domain_swapping	1
doublecortin	1
ef-g	1
ef-tu	1
em	1
epitopes	1
essay	1
f1atpase	1
fad	1
farnesyltransferase	1
fdh	1
ff99sb	1
flagella	1
flagellar_motor	1
flu	1
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fret	1
ftsz	1
funding	1
gaba	1
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gene_ontology	1
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gpus	1
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hiv	1
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hoh	1
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hsp70	1
hydrodynamics	1
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jc	1
kar3	1
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kinesin_tail	1
kinetics	1
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nice_figure	1
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pcp	1
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programming	1
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protein_annotation	1
protein_engineering	1
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protonation	1
ptms	1
qm	1
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rabkinesin	1
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ran	1
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rna	1
rna_dynamics	1
rna_polymerase	1
roc	1
sas	1
scop	1
sequence_conservation	1
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sheer_motion	1
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similarity	1
single_molecule	1
smallrna	1
sos	1
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superamolecular	1
systems_biology	1
torsion	1
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tyrosine_kinase	1
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ubiqutin	1
umbrella	1
virulence_factors	1
virus	1
wavelets	1
wham	1
wireing_digrams	1

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