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Recent papers matching barry's watchlist criteria

	Identification of novel peptide substrates for protein farnesyltransferase reveals two substrate classes with distinct sequence selectivities [My Copy] Journal of Molecular Biology (28 October 2009) by James L. Hougland, Katherine A. Hicks, Heather L. Hartman, Rebekah A. Kelly, Terry J. Watt, Carol A. Fierke
	Mechanistic role of structurally dynamic regions in the Dicistroviridae IGR IRESs [My Copy] Journal of Molecular Biology (28 October 2009) by Jennifer S. Pfingsten, Alice E. Castile, Jeffrey S. Kieft
	Corrigendum to “Crystal Structures of Different Substates of Bacteriorhodopsin’s M Intermediate at Various pH Levels” [J. Mol. Biol. (2009) 393, 559–573] [My Copy] Journal of Molecular Biology (28 October 2009) by Masataka Yamamoto, Naoki Hayakawa, Midori Murakami, Tsutomu Kouyama
	Erratum to “Insights into the Biosynthesis of the Vibrio cholera Major Autoinducer CAI-1 from the Crystal Structure of the PLP-Dependent Enzyme CqsA” [J. Mol. Biol. (2009) 92, 763–773] [My Copy] Journal of Molecular Biology (27 October 2009) by Nasrin Jahan, Jane A. Potter, Md Sheikh, et al.Catherine H. Botting, Sally L. Shirran, Nicholas J. Westwood, Garry L. Taylor
	PilM/N/O/P Proteins Form an Inner Membrane Complex That Affects the Stability of the Pseudomonas aeruginosa Type IV Pilus Secretin [My Copy] Journal of Molecular Biology, Vol. 394, No. 1. (20 November 2009), pp. 128-142. by M. Ayers, L. M. Sampaleanu, S. Tammam, et al.J. Koo, H. Harvey, P. L. Howell, L. L. Burrows
	Periplasmic Domains of Pseudomonas aeruginosa PilN and PilO Form a Stable Heterodimeric Complex [My Copy] Journal of Molecular Biology, Vol. 394, No. 1. (20 November 2009), pp. 143-159. by L. M. Sampaleanu, J. B. Bonanno, M. Ayers, et al.J. Koo, S. Tammam, S. K. Burley, S. C. Almo, L. L. Burrows, P. L. Howell
	Structure, dynamics and thermodynamics of the human centrin 2/hSfi1 complex [My Copy] Journal of Molecular Biology (24 October 2009) by Juan Martinez-Sanz, Fatiha Kateb, Liliane Assairi, et al.Yves Blouquit, Geoffrey Bodenhausen, Daniel Abergel, Liliane Mouawad, Constantin T. Craescu
	The Crystal Structure of the Novobiocin Biosynthetic Enzyme NovP: The First Representative Structure for the TylF O-Methyltransferase Superfamily [My Copy] Journal of Molecular Biology (24 October 2009) by Inmaculada G. García, Clare E. M. Stevenson, Isabel Usón, Caren L. Meyers, Christopher T. Walsh, David M. Lawson
	DARPin-assisted crystallography of the CC2-LZ domain of NEMO reveals a coupling between dimerization and ubiquitin-binding [My Copy] Journal of Molecular Biology (23 October 2009) by Olivera Grubisha, Monika Kaminska, Stéphane Duquerroy, et al.Elisabeth Fontan, Florence Cordier, Ahmed Haouz, Bertrand Raynal, Jeanne Chiaravalli, Muriel Delepierre, Alain Israël
	Structural analysis of cysteine S-nitrosylation: A modified acid-based motif and the emerging role of trans-nitrosylation [My Copy] Journal of Molecular Biology (23 October 2009) by Stefano M. Marino, Vadim N. Gladyshev
	Triosephosphate Isomerase: 15N and 13C Chemical Shift Assignments and Conformational Change upon Ligand Binding by Magic-Angle Spinning Solid-State NMR Spectroscopy [My Copy] Journal of Molecular Biology (23 October 2009) by Yimin Xu, Justin Lorieau, Ann E. McDermott
	The dominance of symmetry in the evolution of homo-oligomeric proteins [My Copy] Journal of Molecular Biology (23 October 2009) by Georg E. Schulz
	Exploring linkage dependence of polyubiquitin conformations using molecular modeling [My Copy] Journal of Molecular Biology (22 October 2009) by David Fushman, Olivier Walker
	The Crystal Structure of the Hinge Domain of the Escherichia coli Structural Maintenance of Chromosomes Protein MukB [My Copy] Journal of Molecular Biology (22 October 2009) by Yinyin Li, Allyn J. Schoeffler, James M. Berger, Martha G. Oakley
	Engineered cystine knot miniproteins as potent inhibitors of human mast cell tryptase β [My Copy] Journal of Molecular Biology (21 October 2009) by Christian P. Sommerhoff, Olga Avrutina, Hans-Ulrich Schmoldt, Dusica Gabrijelcic-Geiger, Ulf Diederichsen, Harald Kolmar
	An Enhanced System for Unnatural Amino Acid Mutagenesis in E. coli [My Copy] Journal of Molecular Biology (21 October 2009) by Travis S. Young, Insha Ahmad, Jun A. Yin, Peter G. Schultz
	A model for all genomes; the role of transcription factories [My Copy] Journal of Molecular Biology (21 October 2009) by Peter R. Cook
	Identification of a new region of SARS-CoV S protein critical for viral entry [My Copy] Journal of Molecular Biology (21 October 2009) by Ying Guo, Jennifer Tisoncik, Susanna McReynolds, et al.Michael Farzan, Bellur S. Prabhakar, Thomas Gallagher, Lijun Rong, Michael Caffrey
	In Vitro Dynamic Visualization Analysis of Fluorescently Labeled Minor Capsid Protein IX and Core Protein V by Simultaneous Detection [My Copy] Journal of Molecular Biology (21 October 2009) by Hideyo Ugai, Minghui Wang, Long P. Le, David A. Matthews, Masato Yamamoto, David T. Curiel
	Factors that Determine the Efficiency of HIV-1 Strand Transfer Initiated at a Specific Site [My Copy] Journal of Molecular Biology (21 October 2009) by Sean T. Rigby, Keith P. Van Nostrand, April E. Rose, Robert J. Gorelick, David H. Mathews, Robert A. Bambara
	Bicarbonate-mediated stimulation of RegA, the global virulence regulator from Citrobacter rodentium [My Copy] Journal of Molecular Biology (21 October 2009) by Ji Yang, Con Dogovski, Dianna Hocking, Marija Tauschek, Matt Perugini, Roy M. Robins-Browne
	The 19S ATPase S6a (S6’/TBP1) Regulates Transcription Initiation of the Class II Transactivator [My Copy] Journal of Molecular Biology (21 October 2009) by Agnieszka D. Truax, Olivia I. Koues, Marta K. Mentel, Susanna F. Greer
	Sequence-dependent DNA flexibility mediates DNase I cleavage [My Copy] Journal of Molecular Biology (20 October 2009) by Brahim Heddi, Josephine Abi-Ghanem, Marc Lavigne, Brigitte Hartmann
	Conformational flexibility of the ATPase SecA enables peptide interaction and translocation [My Copy] Journal of Molecular Biology (20 October 2009) by Jochen Zimmer, Tom A. Rapoport
	The processing of human rhomboid intramembrane serine protease RHBDL2 is required for its proteolytic activity [My Copy] Journal of Molecular Biology (20 October 2009) by Xiaojun Lei, Yue-Ming Li
	Evolution of stability in a cold-active enzyme elicits specificity relaxation and highlights substrate-related effects on temperature adaptation [My Copy] Journal of Molecular Biology (20 October 2009) by Pietro Gatti-Lafranconi, Antonino Natalello, Sascha Rehm, Silvia M. Doglia, Jürgen Pleiss, Marina Lotti
	Thermodynamics of GTP and GDP Binding to Bacterial Initiation Factor 2 Suggests Two Types of Structural Transitions [My Copy] Journal of Molecular Biology (16 October 2009) by Vasili Hauryliuk, Vladimir A. Mitkevich, Albena Draycheva, et al.Stoyan Tankov, Viktoriya Shyp, Andrey Ermakov, Alexandra A. Kulikova, Alexander A. Makarov, Mans Ehrenberg
	Calcitriol upregulates open chromatin and elongation markers at functional Vitamin D response elements in the distal part of the 5-lipoxygenase gene [My Copy] Journal of Molecular Biology (16 October 2009) by Kirsten L. Stoffers, Bernd L. Sorg, Sabine Seuter, Oliver Rau, Olof Rådmark, Dieter Steinhilber
	Corrigendum to “Deciphering Membrane Insertion of the Diphtheria Toxin T Domain by Specular Neutron Reflectometry and Solid-State NMR Spectroscopy” [J. Mol. Biol. (2009) 391, 872–883] [My Copy] Journal of Molecular Biology (16 October 2009) by Alexandre Chenal, Lydia Prongidi-Fix, Aurélie Perier, et al.Christopher Aisenbrey, Grégory Vernier, Stephan Lambotte, Michael Haertlein, Marie-Thérèse Dauvergne, Giovanna Fragneto, Burkhard Bechinger
	Role of small oligomers on the amyloidogenic aggregation free energy landscape [My Copy] Journal of Molecular Biology (16 October 2009) by Xianglan He, Jason T. Giurleo, David S. Talaga
	Origins of Pressure-induced Protein Transitions [My Copy] Journal of Molecular Biology (16 October 2009) by Tigran V. Chalikian, Macgregor Jr
	Tryptophan Fluorescence Reveals Structural Features of α-Synuclein Oligomers [My Copy] Journal of Molecular Biology (16 October 2009) by B. D. Van Rooijen, K. A. Van Leijenhorst-Groener, M. M. A. E. Claessens, V. Subramaniam
	Crystal Structures of the Histidine Acid Phosphatase from Francisella tularensis Provide Insight into Substrate Recognition [My Copy] Journal of Molecular Biology (15 October 2009) by Harkewal Singh, Richard L. Felts, Jonathan P. Schuermann, Thomas J. Reilly, John J. Tanner
	Identifying Assembly-Inhibiting and Assembly-Tolerant Sites in the SbsB S-Layer Protein from Geobacillus stearothermophilus [My Copy] Journal of Molecular Biology (15 October 2009) by Helen Kinns, Helga Badelt-Lichtblau, Eva M. Egelseer, Uwe B. Sleytr, Stefan Howorka
	Structural Basis of Substrate Binding to UDP-galactopyranose Mutase: Crystal Structures in the Reduced and Oxidized State Complexed with UDP-galactopyranose and UDP [My Copy] Journal of Molecular Biology (15 October 2009) by Sarathy K. Partha, Karin E. van Straaten, David A. R. Sanders
	NMR Studies Reveal the Role of Biomembranes in Modulating Ligand Binding and Release by Intracellular Bile Acid Binding Proteins [My Copy] Journal of Molecular Biology (15 October 2009) by Massimo Pedò, Frank Löhr, Mariapina D'Onofrio, Michael Assfalg, Volker Dötsch, Henriette Molinari
	Segmented Helical Structure of the Neck Region of the Glycan-Binding Receptor DC-SIGNR [My Copy] Journal of Molecular Biology (14 October 2009) by Hadar Feinberg, Cynthia K. W. Tso, Maureen E. Taylor, Kurt Drickamer, William I. Weis
	Structure of IL-17A in Complex with a Potent, Fully Human Neutralizing Antibody [My Copy] Journal of Molecular Biology (14 October 2009) by Stefan Gerhardt, W. Mark Abbott, David Hargreaves, et al.Richard A. Pauptit, Rick A. Davies, Maurice R. C. Needham, Caroline Langham, Wendy Barker, Azad Aziz, Melanie J. Snow
	Solution Structure of Ectodomains of the Insulin Receptor Family: The Ectodomain of the Type 1 Insulin-Like Growth Factor Receptor Displays Asymmetry of Ligand Binding Accompanied by Limited Conformational Change [My Copy] Journal of Molecular Biology (14 October 2009) by Andrew E. Whitten, Brian J. Smith, John G. Menting, et al.Mai B. Margetts, Neil M. McKern, George O. Lovrecz, Timothy E. Adams, Kim Richards, John D. Bentley, Jill Trewhella
	Structure of the Small Outer Capsid Protein, Soc: A Clamp for Stabilizing Capsids of T4-like Phages [My Copy] Journal of Molecular Biology (14 October 2009) by Li Qin, Andrei Fokine, Erin O'Donnell, Venigalla B. Rao, Michael G. Rossmann
	The Central Portion of Factor H (Modules 10–15) Is Compact and Contains a Structurally Deviant CCP Module [My Copy] Journal of Molecular Biology (14 October 2009) by Christoph Q. Schmidt, Andrew P. Herbert, Haydyn D. T. Mertens, et al.Mara Guariento, Dinesh C. Soares, Dusan Uhrin, Arthur J. Rowe, Dmitri I. Svergun, Paul N. Barlow
	Adenylate-forming enzymes [My Copy] Current Opinion in Structural Biology (15 October 2009) by Stefan Schmelz, James H. Naismith
	Structural characterization of the mammalian deoxynucleotide N-hydrolase Rcl and its stabilizing interactions with two inhibitors [My Copy] Journal of Molecular Biology (12 October 2009) by Yinshan Yang, André Padilla, Chi Zhang, Gilles Labesse, P. Alexandre Kaminski
	Force and function: probing proteins with AFM-based force spectroscopy [My Copy] Current Opinion in Structural Biology (12 October 2009) by Elias M. Puchner, Hermann E. Gaub
	Biophysical methods [My Copy] Current Opinion in Structural Biology (12 October 2009) by Keith Moffat, Andreas Engel
	Selected topics from the advancing forefront of glycoprotein and glycolipid research [My Copy] Current Opinion in Structural Biology (12 October 2009) by Nathan Sharon, John Gallagher
	Posttranslational modifications affect the interaction of S100 proteins with tumour suppressor p53 [My Copy] Journal of Molecular Biology (09 October 2009) by Jan Dieck, Daniel P. Teufel, Agnes M. Jaulent, et al.Maria R. Fernandez-Fernandez, Trevor J. Rutherford, Alexandra Wyslouch-Cieszynska, Alan R. Fersht
	Roles of multiple flagellins in flagellar formation and flagellar growth post bdelloplast- lysis, in Bdellovibrio bacteriovorus [My Copy] Journal of Molecular Biology (09 October 2009) by Yoshiko Iida, Laura Hobley, Carey Lambert, Andrew K. Fenton, R. Elizabeth Sockett, Shin-Ichi Aizawa
	Structural Insights into Yeast DNA Polymerase δ by Small Angle X-ray Scattering (SAXS) [My Copy] Journal of Molecular Biology (08 October 2009) by Rinku Jain, Michal Hammel, Robert E. Johnson, Louise Prakash, Satya Prakash, Aneel K. Aggarwal
	Comparing the functional roles of nonconserved sequence positions in homologous transcription repressors: Implications for sequence/function analyses [My Copy] Journal of Molecular Biology (08 October 2009) by Sudheer Tungtur, Sarah Meinhardt, Liskin Swint-Kruse

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protein_structure	278
molecular_motors	190
review	189
kinesin	145
protein_dynamics	132
md_simulation	93
protein_sequence	83
protein_protein	77
bioinf_methods	76
protein_evolution	69
protein_design	65
nma	50
structure_comparison	46
structural_bioinformatics	45
cytoskeleton	44
tubulin	42
allosteric	39
bd_simulation	38
myosin	37
electrostatics	34
dynein	29
pca	29
ctbp	27
drug_design	26
sequence_comparison	24
eg5	23
ras	23
correlated_mutations	22
nmr	21
motor_model	20
kinases	19
protein_folding	19
domain_motions	18
monastrol	18
g_proteins	17
clustering	16
docking	16
bioinformatics	15
coarse_grain	15
core_structure	15
ntpases	14
correlated_motions	13
networks	13
protein_ligand	13
career	12
comparative_model	12
p-loop	12
contacts	11
core_residues	11
hbond	11
fold_space	10
free_energy	9
gotit	9
mts	9
aaa	8
general	8
mine	8
pdz	8
protein_fragments	8
protein_packing	8
sca	8
small_world	8
torsion_angles	8
transcription_factor	8
cargo_attachment	7
conformational_selection	7
dehydron	7
mitosis	7
nachr	7
r	7
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cryo_em	6
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ion_channels	6
actin	5
binding	5
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microarrays	5
mutants	5
phylogeny	5
replica_exchange	5
adk	4
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cancer	4
hsp90	4
myovi	4
ncd	4
ribosome	4
smd	4
accelerated_md	3
adh	3
alex	3
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chagas	3
coarse-grained	3
dynamic_similarity	3
function_prediction	3
genomic_context	3
gpcr	3
groel	3
guide	3
ion_pairs	3
itc	3
kif1a	3
kin13	3
kin14_kar3	3
membranes	3
myov	3
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neck_linker	3
poster	3
protein_function	3
protein-ligand	3
protein-protein	3
residue_annotation	3
server	3
structure_refinement	3
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swi-swii	3
test	3
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achr	2
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amber	2
arf	2
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ikk	2
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mm-pbsa	2
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em	1
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ubiqutin	1
umbrella	1
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virus	1
wavelets	1
wham	1
wireing_digrams	1

barry's watchlist [more than 800 articles] Export

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