bertelsen's microarray [at least 200 articles] Export

Recent papers added to bertelsen's library classified by the tag microarray. You can also see everyone's microarray.

	Linear model for fast background subtraction in oligonucleotide microarrays [My Copy] Algorithms for Molecular Biology, Vol. 4, No. 1. (2009), 15. by K. Myriam Kroll, Gerard Barkema, Enrico Carlon posted to software preprocessing oligonucleotide model microarray linear background algorithm by bertelsen on 2009-11-23 22:04:40 as along with 1 person renatomilani
	Combining chromatin immunoprecipitation and oligonucleotide tiling arrays (ChIP-Chip) for functional genomic studies. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 556 (2009), pp. 155-164. by Jérôme Eeckhoute, Mathieu Lupien, Myles Brown posted to tiling systems-biology oligonucleotide microarray functional-genomics chromatin chip-chip array by bertelsen on 2009-11-18 22:43:10 as
	ChIP-chip comes of age for genome-wide functional analysis. [My Copy] Cancer research, Vol. 66, No. 14. (15 July 2006), pp. 6899-6902. by Jiejun Wu, Laura T. Smith, Christoph Plass, Tim H-M H. Huang posted to microarray gene-regulation functional-genomics epigenetic chip-chip by bertelsen on 2009-11-18 22:41:00 as along with 5 people and 1 group nklee guhjy imedina weimingzhe tvdbulck BioinfoCIPF
	Standardization of microarray and pharmacogenomics data. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 316 (2006), pp. 111-157. by Casey S. Husser, Jeffrey R. Buchhalter, O. Scott Raffo, et al.Amnon Shabo, Steven H. Brown, Karen E. Lee, Peter L. Elkin posted to standardization pharmacogenomics microarray by bertelsen on 2009-11-18 22:10:42 as
	DNA microarrays: a powerful genomic tool for biomedical and clinical research. [My Copy] Molecular medicine (Cambridge, Mass.), Vol. 13, No. 9-10. (t 2007), pp. 527-541. by Victor Trevino, Francesco Falciani, Hugo A. Barrera-Saldaña posted to tool review multidisciplinary microarray clinical biomedical by bertelsen on 2009-11-18 20:42:42 as
	Application of Microarrays for DNA Methylation Profiling [My Copy] Genomics Protocols, Vol. 439 (2008), pp. 109-129. by Axel Schumacher, Andreas Weinhäusl, Arturas Petronis posted to profiling microarray methylation epigenetic dna by bertelsen on 2009-11-18 20:33:53 as along with 1 person Jporci
	[5] Standards in Gene Expression Microarray Experiments [My Copy] Methods in Enzymology, Vol. 411 (2006), pp. 63-78. by M. Salit posted to standard microarray medicine genomics gene-expression experiment cross-study cross-laboratory by bertelsen on 2009-11-06 15:20:34 as
	ArrayExpress update--from an archive of functional genomics experiments to the atlas of gene expression [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_1. (1 January 2009), pp. D868-872. by Helen Parkinson, Misha Kapushesky, Nikolay Kolesnikov, et al.Gabriella Rustici, Mohammad Shojatalab, Niran Abeygunawardena, Hugo Berube, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Ele Holloway, Margus Lukk, James Malone, Roby Mani, Ekaterina Pilicheva, Tim F. Rayner, Faisal Rezwan, Anjan Sharma, Eleanor Williams, Xiangqun Z. Bradley, Tomasz Adamusiak, Marco Brandizi, Tony Burdett, Richard Coulson, Maria Krestyaninova, Pavel Kurnosov, Eamonn Maguire, Sudeshna G. Neogi, Philippe Rocca-Serra, Susanna-Assunta Sansone, Nataliya Sklyar, Mengyao Zhao, Ugis Sarkans, Alvis Brazma posted to rna-seq repository microarray gene-expression functional-genomics database atlas by bertelsen on 2009-11-05 22:40:22 as along with 9 people ptrobajo daforerog guhjy samfromklamart vkwn Borelli jfr kittipat abizar
	Segmentation and intensity estimation of microarray images using a gamma-t mixture model [My Copy] Bioinformatics, Vol. 23, No. 4. (15 February 2007), pp. 458-465. by Jangsun Baek, Young S. Son, Geoffrey J. McLachlan posted to segmentation mixture microarray image-processing gamma cdna by bertelsen on 2009-10-28 12:22:05 as
	OligoRAP - an Oligo Re-Annotation Pipeline to improve annotation and estimate target specificity. [My Copy] BMC proceedings, Vol. 3 Suppl 4 (2009) by Pieter Bt B. Neerincx, Han Rauwerda, Haisheng Nie, Martien Am A. Groenen, Timo M. Breit, Jack Am A. Leunissen posted to webservices tool target specificity pipelines oligonucleotide microarray high-throughput annotation by bertelsen on 2009-10-28 12:07:39 as
	The application of single nucleotide polymorphism microarrays in cancer research. [My Copy] Current genomics, Vol. 8, No. 4. (June 2007), pp. 219-228. by Xueying Mao, Bryan D. Young, Yong-Jie J. Lu posted to snp microarray cancer application by bertelsen on 2009-10-08 00:13:27 as
	MicroRNA detection by microarray. [My Copy] Analytical and bioanalytical chemistry, Vol. 394, No. 4. (June 2009), pp. 1117-1124. by Wei Li, Kangcheng Ruan posted to mirna microarray detection by bertelsen on 2009-10-07 22:38:52 as along with 2 people and 1 group guhjy jfr microRNA
	Integrative analysis of the cancer transcriptome [My Copy] Nature Genetics, Vol. 37 Suppl (01 June 2005), pp. S31-S37. by Daniel R. Rhodes, Arul M. Chinnaiyan posted to transcriptome microarray integrative cancer analysis by bertelsen on 2009-10-06 23:46:47 as along with 8 people and 2 groups daforerog cswinburne aalibes textoris ealloza shikin waghsk srp33 BioinfoCIPF GeneGo
	Adjustment of systematic microarray data biases. [My Copy] Bioinformatics (Oxford, England), Vol. 20, No. 1. (1 January 2004), pp. 105-114. by Monica Benito, Joel Parker, Quan Du, et al.Junyuan Wu, Dong Xiang, Charles M. Perou, J. S. Marron posted to normalization microarray bias by bertelsen on 2009-10-06 21:42:41 as along with 1 person chrisamiller
	Gene expression phenotypic models that predict the activity of oncogenic pathways. [My Copy] Nature genetics. , Vol. 34, No. 2. (June 2003), pp. 226-230. by Erich Huang, Seiichi Ishida, Jennifer Pittman, et al.Holly Dressman, Andrea Bild, Mark Kloos, Mark D'Amico, Richard G. Pestell, Mike West, Joseph R. Nevins posted to phenotypes pathways oncogenesis models microarray gene-expression by bertelsen on 2009-10-05 23:57:33 as along with 1 person balicea
	From signatures to models: understanding cancer using microarrays [My Copy] Nature Genetics, Vol. 37 Suppl (01 June 2005), pp. S38-S45. by Eran Segal, Nir Friedman, Naftali Kaminski, Aviv Regev, Daphne Koller posted to transcription signatures processes networks multi-scale molecular modules modular models microarray mechanistic gene-regulation disease comparative cancer by bertelsen on 2009-10-05 15:56:21 as along with 13 people and 1 group chasmand roys lwaldron cswinburne aalibes textoris troels_marstrand wnpx nirfriedman rdiaz sampath shikin srp33 GeneGo
	Modeling Cancer Progression via Pathway Dependencies [My Copy] PLoS Comput Biol, Vol. 4, No. 2. (15 February 2008), e28. by Elena J. Edelman, Justin Guinney, Jen-Tsan Chi, Phillip G. Febbo, Sayan Mukherjee posted to gastric-cancer-group treatment progression prognosis pathway modelling microarray mechanism interpretation integrative etiology diagnosis dependence cancer by bertelsen on 2009-10-04 00:30:01 as along with 6 people ptrobajo wei aviad_work ipark-kaist bootsy jfr
	Theory and Limitations of Genetic Network Inference from Microarray Data [My Copy] Annals of the New York Academy of Sciences, Vol. 1115, No. Reverse Engineering Biological Networks: Opportunities and Challenges in Computational Methods for Pathway Inference. (December 2007), pp. 51-72. by Adam A. Margolin, O. Andrea Califan posted to theory statistical review reverse-engineering network microarray latent inference genetic gene-expression dependence by bertelsen on 2009-09-30 18:01:54 as along with 2 people talponer roys
	Microarray data mining using Bioconductor packages. [My Copy] BMC proceedings, Vol. 3 Suppl 4 (2009) by Haisheng Nie, Pieter Bt B. Neerincx, Jan van der Poel, et al.Francesco Ferrari, Silvio Bicciato, Jack Am A. Leunissen, Martien Am A. Groenen posted to orthologous microarray human go expression enrichment-analysis differential chromosome-wide chromosomal-expression chicken analysis by bertelsen on 2009-09-30 17:28:16 as along with 1 person guhjy
	EMMA 2--a MAGE-compliant system for the collaborative analysis and integration of microarray data. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (06 February 2009), 50. by Michael Dondrup, Stefan P. Albaum, Thasso Griebel, et al.Kolja Henckel, Sebastian Jünemann, Tim Kahlke, Christiane K. Kleindt, Helge Küster, Burkhard Linke, Dominik Mertens, Virginie Mittard-Runte, Heiko Neuweger, Kai J. Runte, Andreas Tauch, Felix Tille, Alfred Pühler, Alexander Goesmann posted to tool standard software microarray miame mage integration data analysis by bertelsen on 2009-09-30 17:22:13 as along with 4 people and 1 group barriot guhjy cassj dswan Bioinformatics
	Linking microarray reporters with protein functions. [My Copy] BMC bioinformatics, Vol. 8, No. 1. (2007) by Stan Gaj, Arie van Erk, Rachel I. van Haaften, Chris T. Evelo posted to microarray functional-genomics annotation analysis by bertelsen on 2009-09-29 08:33:09 as along with 1 person jayster4
	Linear models and empirical bayes methods for assessing differential expression in microarray experiments. [My Copy] Statistical applications in genetics and molecular biology, Vol. 3, No. 1. (2004) by Gordon K. Smyth posted to models microarray linear gene-expression differential bioconductor analysis by bertelsen on 2009-09-28 17:02:00 as along with 19 people and 1 group schwalb shikin jperkins zoex_99 ipark-kaist lwaldron paszkows isimpson Stew ihpark giovenko RMGraze maryee mayercd justescaped ugengma heliopais guhjy talponer Bioinformatics - CRUK
	Comparative genomic hybridization: uses and limitations. [My Copy] Seminars in hematology, Vol. 37, No. 4. (October 2000), pp. 348-357. by P. Lichter, S. Joos, M. Bentz, S. Lampel posted to microarray comparative-genomic-hybridization cgh by bertelsen on 2009-09-28 16:12:17 as
	Robust estimators for expression analysis [My Copy] Bioinformatics, Vol. 18, No. 12. (1 December 2002), pp. 1585-1592. by Earl Hubbell, Wei-Min Liu, Rui Mei posted to summary probeset microarray expression estimates affymetrix by bertelsen on 2009-09-28 14:40:28 as along with 7 people and 1 group humburg lawraga VGreiff vertikalist GeeSharpMinor jfr wirawan BTS-PT-AS-CS
	Applications of a rat multiple tissue gene expression data set. [My Copy] Genome research, Vol. 14, No. 4. (April 2004), pp. 742-749. by John R. Walker, Andrew I. Su, David W. Self, et al.John B. Hogenesch, Hilmar Lapp, Rainer Maier, Daniel Hoyer, Graeme Bilbe posted to tissue-specific rats quantitative-trait-loci phenotype microarray gene-expression gene functional-genomics co-expression annotation by bertelsen on 2009-09-28 13:52:43 as along with 2 people grahamc eukfn
	Ontological analysis of gene expression data: current tools, limitations, and open problems [My Copy] Bioinformatics, Vol. 21, No. 18. (15 September 2005), pp. 3587-3595. by Purvesh Khatri, Sorin Draghici posted to tool review ontologies microarray gene-expression enrichment-analysis comparison analysis by bertelsen on 2009-09-27 20:19:00 as along with 18 people and 1 group darian jperkins ipark-kaist gjuggler isakemal Stew shikin diamantis Cortel dragonrez macavity1g Garamonfok sgoetz heliopais kristen yggdrasil ellakat marck Bioinformatics - CRUK
	Pathways to the analysis of microarray data. [My Copy] Trends in biotechnology, Vol. 23, No. 8. (August 2005), pp. 429-435. by R. Keira Curtis, Matej Oresic, Antonio Vidal-Puig posted to tool review pathways pathway-analysis microarray integration gene-expression enrichment-analysis analysis by bertelsen on 2009-09-27 20:16:12 as along with 11 people and 2 groups thomaskelder udivi AlexanderPico jfr saman_vp snuppepuppan textoris Ayest tardigrade ealloza heliopais ConklinLab BioinfoCIPF
	Methods for interpreting lists of affected genes obtained in a DNA microarray experiment. [My Copy] BMC proceedings, Vol. 3 Suppl 4 (2009) by Jakob Hedegaard, Cristina Arce, Silvio Bicciato, et al.Agnès Bonnet, Bart Buitenhuis, Melania Collado-Romero, Lene N. Conley, Magali Sancristobal, Francesco Ferrari, Juan J. Garrido, Martien Am A. Groenen, Henrik Hornshøj, Ina Hulsegge, Li Jiang, Angeles Jiménez-Marín, Arun Kommadath, Sandrine Lagarrigue, Jack Am A. Leunissen, Laurence Liaubet, Pieter Bt B. Neerincx, Haisheng Nie, Jan van der Poel, Dennis Prickett, María Ramirez-Boo, Johanna Mj M. Rebel, Christèle Robert-Granié, Axel Skarman, Mari A. Smits, Peter Sørensen, Gwenola Tosser-Klopp, Michael Watson posted to microarray interpretation gene-expression enrichment-analysis biology annotation by bertelsen on 2009-09-27 19:53:52 as
	Comparison of three microarray probe annotation pipelines: differences in strategies and their effect on downstream analysis. [My Copy] BMC proceedings, Vol. 3 Suppl 4 (2009) by Pieter Bt B. Neerincx, Pierrot Casel, Dennis Prickett, et al.Haisheng Nie, Michael Watson, Jack Am A. Leunissen, Martien Am A. Groenen, Christophe Klopp posted to probe-level pipelines microarray comparison annotation affymetrix by bertelsen on 2009-09-27 18:24:49 as
	Quality assessment of the Affymetrix U133A&B probesets by target sequence mapping and expression data analysis. [My Copy] In silico biology, Vol. 7, No. 3. (2007), pp. 241-260. by Yuriy L. Orlov, Jiangtao Zhou, Leonard Lipovich, Atif Shahab, Vladimir A. Kuznetsov posted to sequence quality-control quality-assessment probe-level microarray mapping expression data analysis affymetrix by bertelsen on 2009-09-27 18:22:25 as along with 1 person cottrell
	How to infer gene networks from expression profiles [My Copy] Molecular Systems Biology, Vol. 3 (13 February 2007) by Mukesh Bansal, Vincenzo Belcastro, Alberto Ambesi-Impiombato, Diego di Bernardo posted to reverse-engineering microarray gene-regulation gene-networks gene-expression by bertelsen on 2009-09-20 23:02:48 as along with 38 people and 3 groups Jporci beete tonamswish zufar nicholasflann icq242500260 guhjy Zephyrus antonkratz phoenixzxl isimpson daforerog poirel agonzale roys Neeperando APRegier rdiaz klo Borelli ggallone ptrobajo druvus cswinburne jfr eckart_bindewald wnpx nickluscombe kengg mikaelhuss jrbanga BIBLIOma RockHI lp2 natstreet heliopais mariakmejia tmmurali Jarman Lab EBI-regulation Plantandetc
	An integrative approach to characterize disease-specific pathways and their coordination: a case study in cancer. [My Copy] BMC genomics, Vol. 9 Suppl 1 (2008) by Min Xu, Ming-Chih C. Kao, Juan Nunez-Iglesias, Joseph R. Nevins, Mike West, Xianghong Jasmine J. Zhou posted to topological phenotype pathways network modules microarray methodology integrative integration information functional-genomics disease data-integration cancer by bertelsen on 2009-09-15 20:56:41 as along with 4 people guhjy Zephyrus cswinburne jfr
	A module map showing conditional activity of expression modules in cancer. [My Copy] Nature genetics, Vol. 36, No. 10. (October 2004), pp. 1090-1098. by Eran Segal, Nir Friedman, Daphne Koller, Aviv Regev posted to tumors therapeutic prognostic modules microarray integration gene-expression diagnostic cancer by bertelsen on 2009-09-15 20:51:43 as along with 7 people and 1 group ipark-kaist saman_vp lwaldron jimineep ladygoat balajis nirfriedman CGREL
	Similarities and Differences in Genome-Wide Expression Data of Six Organisms [My Copy] PLoS Biol, Vol. 2, No. 1. (15 December 2003), e9. by Sven Bergmann, Jan Ihmels, Naama Barkai posted to sequence microarray genome-wide gene-expression functional-genomics comparative annotation by bertelsen on 2009-09-09 14:52:38 as along with 10 people and 3 groups thegoose2 floatingpoint roys tharris dragonrez Ayest RMGraze marcius koller jeremymiller C. elegans / WormBase BioinfoCIPF SGU-CIPF
	Using genomic DNA-based probe-selection to improve the sensitivity of high-density oligonucleotide arrays when applied to heterologous species. [My Copy] Plant methods, Vol. 1, No. 1. (2005) by John P. Hammond, Martin R. Broadley, David J. Craigon, et al.Janet Higgins, Zoe F. Emmerson, Henrik J. Townsend, Philip J. White, Sean T. May posted to probe-selection probe oligonucleotide microarray heterologous genechip dna affymetrix by bertelsen on 2009-09-03 15:21:44 as along with 1 person natstreet
	Including probe-level uncertainty in model-based gene expression clustering [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (21 March 2007), 98. by Xuejun Liu, Kevin Lin, Bogi Andersen, Magnus Rattray posted to uncertainty probe-level model microarray gene-expression clustering bayesian by bertelsen on 2009-09-03 00:23:17 as along with 2 people jfr ghattem
	puma: a Bioconductor package for propagating uncertainty in microarray analysis [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 211. by Richard Pearson, Xuejun Liu, Guido Sanguinetti, Marta Milo, Neil Lawrence, Magnus Rattray posted to uncertainty software microarray bioconductor bayesian analysis by bertelsen on 2009-09-02 21:48:47 as along with 8 people and 1 group zufar rdiaz Stew guhjy lwaldron brianb barriot neils Bioinformatics - CRUK
	Metabolic modeling: a tool of drug discovery in the post-genomic era. [My Copy] Drug discovery today, Vol. 7, No. 11. (1 June 2002), pp. 621-628. by Eberhard O. Voit posted to systems-biology review microarray metabolomics metabolic-control-analysis functional-genomics drug-discovery biochemical-systems-theory by bertelsen on 2009-09-01 18:17:11 as
	Integration of Molecular Profiling into the Lung Cancer Clinic [My Copy] Clin Cancer Res, Vol. 15, No. 17. (1 September 2009), pp. 5317-5322. by William Pao, Mark G. Kris, A. John Iafrate, et al.Marc Ladanyi, Pasi A. Janne, Ignacio I. Wistuba, Ryn Miake-Lye, Roy S. Herbst, David P. Carbone, Bruce E. Johnson, Thomas J. Lynch posted to therapy personalized-medicine microarray medical lung clinical cancer by bertelsen on 2009-09-01 14:01:06 as along with 1 person frohike
	Progress of science from microscopy to microarrays (Part 1): Diagnosis of parasitic diseases [My Copy] J Lab Physicians, Vol. 1, No. 1. (1 January 2009), pp. 2-6. by Ayan Dey, Sarman Singh posted to toxoplasma parasitology microarray infection disease by bertelsen on 2009-08-25 23:44:42 as
	Microarrays and stage conversion in Toxoplasma gondii [My Copy] Trends in Parasitology, Vol. 20, No. 6. (June 2004), pp. 288-295. by J. Ellis posted to toxoplasma protozoan parasitology microarray infection by bertelsen on 2009-08-25 23:22:14 as
	Microarray analysis reveals previously unknown changes in Toxoplasma gondii-infected human cells. [My Copy] The Journal of biological chemistry, Vol. 276, No. 26. (29 June 2001), pp. 24223-24231. by I. J. Blader, I. D. Manger, J. C. Boothroyd posted to toxoplasma protozoan parasitology microarray infection human by bertelsen on 2009-08-25 23:21:05 as
	A comparison of background correction methods for two-colour microarrays [My Copy] Bioinformatics, Vol. 23, No. 20. (15 October 2007), pp. 2700-2707. by Matthew E. Ritchie, Jeremy Silver, Alicia Oshlack, et al.Melissa Holmes, Dileepa Diyagama, Andrew Holloway, Gordon K. Smyth posted to background comparison correction microarray two-color by bertelsen on 2009-07-27 11:01:39 as along with 7 people guhjy jfr shigepong GeeSharpMinor debasis caseybrown Stew
	Limma: linear models for microarray data. [My Copy] In Bioinformatics and Computational Biology Solutions using R and Bioconductor (2005), pp. 397-420. by G. K. Smyth edited by R. Gentleman, V. Carey, S. Dudoit, R. Irizarry, W. Huber posted to analysis bioconductor gene-expression linear microarray model by bertelsen on 2009-07-27 10:54:12 as along with 2 people and 1 group coela giovanni GeschwindLab
	Expression Profiler: next generation--an online platform for analysis of microarray data [My Copy] Nucl. Acids Res., Vol. 32, No. suppl_2. (1 July 2004), pp. W465-470. by Misha Kapushesky, Patrick Kemmeren, Aedin C. Culhane, et al.Steffen Durinck, Jan Ihmels, Christine Korner, Meelis Kull, Aurora Torrente, Ugis Sarkans, Jaak Vilo, Alvis Brazma posted to analysis gene-expression microarray tool webservices by bertelsen on 2009-07-27 10:41:21 as along with 4 people pengchy rdiaz fisherp siebert
	Cross-Study Projections of Genomic Biomarkers: An Evaluation in Cancer Genomics [My Copy] PLoS ONE, Vol. 4, No. 2. (19 February 2009), e4523. by Joseph E. Lucas, Carlos M. Carvalho, Julia L. Chen, Jen-Tsan Chi, Mike West posted to biomarker cancer cross-study factor-analysis gene-expression genomics invitro invivo microarray by bertelsen on 2009-07-24 20:01:11 as along with 4 people zufar jfr frohike jmstat
	WebArray: an online platform for microarray data analysis [My Copy] BMC Bioinformatics, Vol. 6, No. 1. (2005), 306. by Xiaoqin Xia, Michael Mcclelland, Yipeng Wang posted to analysis microarray software webservices by bertelsen on 2009-07-20 13:10:27 as along with 4 people natstreet angelicabtto daforerog rdiaz
	A-MADMAN: annotation-based microarray data meta-analysis tool. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (29 June 2009), 201. by Andrea Bisognin, Alessandro Coppe, Francesco Ferrari, et al.Davide Risso, Chiara Romualdi, Silvio Bicciato, Stefania Bortoluzzi posted to annotation gene-expression large-scale meta-analysis microarray normalization software tool by bertelsen on 2009-07-08 11:59:05 as along with 6 people and 1 group daforerog ptrobajo dswan guhjy shikin neils Bioinformatics
	Biomarker discovery in microarray gene expression data with Gaussian processes [My Copy] Bioinformatics, Vol. 21, No. 16. (15 August 2005), pp. 3385-3393. by Wei Chu, Zoubin Ghahramani, Francesco Falciani, David L. Wild posted to bayesian biomarker clinical gaussian gene-expression microarray ordinal by bertelsen on 2009-07-05 00:39:58 as along with 3 people Borelli edwardmorrissey cswinburne
	Probabilistic retrieval and visualization of biologically relevant microarray experiments [My Copy] Bioinformatics, Vol. 25, No. 12. (15 June 2009), pp. i145-153. by Jose Caldas, Nils Gehlenborg, Ali Faisal, Alvis Brazma, Samuel Kaski posted to experiment gene-expression microarray probabilistic repository selection tool visualization by bertelsen on 2009-07-04 19:45:24 as along with 6 people jfr ngehlenborg greg ptrobajo guhjy shikin

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microarray	222
analysis	129
review	123
gene-expression	122
systems-biology	95
bayesian	92
cancer	78
expression	59
networks	57
affymetrix	48
gene	45
functional-genomics	44
software	44
annotation	43
biology	42
tool	42
model	40
regulation	38
network	37
modelling	36
data	34
bioinformatics	31
disease	29
modeling	29
pathway	28
genechip	27
models	27
rna	27
polyadenylation	26
human	25
clustering	24
drug-discovery	24
multi-scale	24
oligonucleotide	24
gene-regulation	23
ontology	23
biochemical	22
probe	22
inference	21
degradation	20
molecular	20
mrna	20
probability	20
transcription	20
differential	19
dynamic	19
factor-analysis	19
database	18
integrative	18
probe-level	18
stochastic	18
chemical	17
mathematical	17
probabilistic	17
simulation	17
dirichlet-process	16
function	16
integration	16
kinetic	16
nonparametric	16
comparison	15
computational	15
drug	15
experiment	15
genome	15
genomics	15
high-throughput	15
r	15
sampling	15
sequence	15
statistical	15
structure	15
theory	15
algorithm	14
enrichment-analysis	14
gastric	14
noise	14
normalization	14
prediction	14
python	14
regression	14
array	13
biochemical-systems-theory	13
bioconductor	13
classification	13
control	13
framework	13
go	13
interpretation	13
mirna	13
personalized-medicine	13
phenotype	13
protein	13
statistics	13
therapy	13
algorithms	12
clinical	12
complexity	12
hierarchical	12
latent	12
mechanism	12
modules	12
pathways	12
promoter	12
transcriptome	12
computational-biology	11
distribution	11
evolution	11
non-protein-coding	11
oncogenesis	11
quality	11
sparse	11
tumour	11
alternative	10
genetic	10
integrating	10
mcmc	10
mixture	10
modular	10
proteomics	10
quantitative	10
systems	10
test	10
uncertainty	10
3-utr	9
biomedical	9
biophysics	9
cell-biology	9
data-integration	9
design	9
diagnostic	9
discovery	9
dna	9
hypothesis	9
information	9
interactions	9
large-scale	9
machine-learning	9
method	9
methodology	9
multiple	9
quality-control	9
selection	9
s-system	9
therapeutic	9
transcription-factor	9
visualization	9
background	8
experimental-design	8
heterogeneity	8
hybridization	8
ica	8
insilico	8
linear	8
measure	8
methods	8
overview	8
rnai	8
synthetic-biology	8
systemic-computation	8
time-series	8
transcripts	8
utr	8
agent-based	7
binary	7
development	7
drug-target	7
emergent-properties	7
infection	7
invivo	7
mapping	7
multivariate	7
organization	7
pathology	7
physiology	7
rats	7
specificity	7
tiling	7
time-course	7
translation	7
webservices	7
cdna	6
chip-chip	6
computation	6
computing	6
databases	6
epigenetic	6
evolutionary-computation	6
feature	6
genetics	6
graphs	6
mammalian	6
matrix-factorization	6
metabolomics	6
nonlinear	6
pre-processing	6
primary	6
processes	6
profiles	6
reactions	6
reverse-engineering	6
rna-seq	6
scientific	6
sequencing	6
summary	6
thermodynamics	6
tumor	6
upt	6
apoptosis	5
application	5
baysian	5
bias	5
binfbib	5
biomarker	5
book	5
cell-cycle	5
comparative	5
correction	5
dependence	5
encode	5
environment	5
error	5
eukaryotic	5
false	5
gaussian	5
gene-function	5
genome-wide	5
gibbs	5
identification	5
import	5
invitro	5
kidney	5
localization	5
measurement	5
medical	5
membrane	5
metabolic-network	5
ncrna	5
nmd	5
nonsense-mediated	5
normal	5
ontologies	5
optimization	5
pathway-analysis	5
pattern	5
pca	5
physical	5
prior	5
process	5
profiling	5
profilingmethods	5
protein-expression	5
quality-assessment	5
quantitative-trait-loci	5
sensitivity	5
signal	5
simulations	5
splicing	5
synthesis	5
time	5
topological	5
treatment	5
truncated	5
unknown	5
variation	5
variational	5
5-utr	4
animals	4
approximation	4
biomolecular	4
cage	4
cell	4
circuits	4
co-expression	4
co-regulation	4
decay	4
diversity	4
dynamics	4
endolymphatic-sac	4
entropy	4
estimation	4
exons	4
exploratory	4
filtering	4
gastric-cancer-group	4
global	4
graphical-modelling	4
grid	4
guide	4
high-dimensional	4
hybrid	4
inflammation	4
inhibitors	4
inner-ear	4
interface	4
knowledge-based	4
literature	4
local	4
map	4
mechanistic	4
metabolic-control-analysis	4
mice	4
mining	4
mixtures	4
motif	4
nested	4
ode	4
ordinal	4
pharmacogenomic	4
philosophy	4
physics	4
post-transcriptional	4
power-laws	4
prognosis	4
sequence-analysis	4
signals	4
signature	4
signatures	4
standard	4
steady-state	4
survey	4
tissue-specific	4
toxoplasma	4
transcript	4
transformation	4
web	4
accuracy	3
adjustment	3
affinity	3
affy	3
alignment	3
amplification	3
analysismethods	3
assessment	3
associations	3
automatic	3
bacteria	3
beta	3
calibration	3
cell-lines	3
characteristics	3
chemical-master-equation	3
chemotherapy	3
chip-seq	3
chromatin	3
chromosomal-expression	3
combinatorial	3
component	3
correlation	3
dataset	3
differential-equation	3
differentiation	3
dirichlet	3
distributions	3
dynamical-systems	3
enzyme	3
evaluation	3
exchangeability	3
fdr	3
gene-circuits	3
generalized	3
genes	3
genotyping	3
histological	3
hmm	3
humans	3
identifiability	3
independence	3
interference	3
introduction	3
languages	3
learning	3
management	3
medicine	3
metastatic	3
model-selection	3
modularity	3
multinomial	3
natural	3
nonnegative	3
nuclear	3
parasitology	3
pattern-recognition	3
performance	3
perturbation	3
polymerase	3
random	3
ranking	3
regulators	3
renormalization-group-analysis	3
repository	3
reproducibility	3
resonance	3
resource	3
robust	3
signaling-system	3
signal-transduction	3
snp	3
stochastic-resonance	3
structural-biology	3
tumorigenesis	3
unsupervised	3
3	2
5	2
acid	2
anatomy	2
approximate	2
approximations	2
behaviour	2
benchmark	2
biopython	2
buffet	2
cdf	2
cell-migration	2
cell-population	2
cells	2
chromosome-wide	2
constraint-based-modelling	2
copy-number-variation	2
cox-theorem	2
cross-hybridization	2
cross-laboratory	2
cross-platform	2
cross-study	2
cytoplasmic	2
definition	2
density	2
detection	2
deterministic	2
difference	2
distance	2
dsrna	2
epithelial	2
evidence	2
exon	2
false-discovery	2
for:birte	2
format	2
foundations	2
fractal	2
game-theory	2
gamma	2
generative	2
genotype	2
grid-computing	2
health	2
heart	2
heterogeneous	2
homologous	2
image-processing	2
immune-system	2
indian	2
internet	2
isoform	2
knowledgebase	2
kullback-leibler	2
lasso	2
logic	2
lung	2
mage	2
mass_spectroscopy	2
matlab	2
matrix	2
matroid	2
memory	2
metabolic	2
methylation	2
miame	2
mismatch	2
missing-value	2
mitochondria	2
molecular-connectivity-map	2
multi-target	2
mutations	2
neuroscience	2
nonequilibrium	2
non-specific	2
nucleic	2
numerical	2
octave	2
oncogene-addiction	2
opensource	2
organ	2
parallel	2
parts	2
p-bodies	2
perspective	2
pharmacogenomics	2
phenome	2
physiome	2
pipelines	2
plant	2
plausibility	2
poly	2
post-transcription	2
preprocessing	2
present_absent_call	2
primer	2
probesgenetics	2
probit	2
programming	2
properties	2
proteome	2
protozoan	2
rate-law	2
reasoning	2
rma	2
sage	2
saturation	2
semantic-web	2
sequential	2
set	2
small	2
space	2
stem-cells	2
stochasticity	2
stress	2
subcellular	2
target	2
t-cell	2
threshold	2
tissue-level	2
translational-medicine	2
t-test	2
two-color	2
user-computer	2
variational-inference	2
vector	2
2d	1
3d	1
454	1
5--3	1
abstracts	1
across	1
adenocarcinomas	1
agilent	1
aging	1
algebra	1
allometric	1
alphabet	1
alternate	1
analysisinstrumentationmethods	1
analytical	1
and	1
animal-communication	1
anlaysis	1
annotations	1
antisense	1
antiviral	1
applied	1
approximat	1
aquaporins	1
architecture	1
articles	1
artifacts	1
assay	1
atlas	1
atmosphere	1
atom	1
averaging	1
basic	1
bayes-theorem	1
bifurcation	1
bilayer	1
binding	1
binomial	1
bioactive	1
biomechanical	1
biomedicine	1
biophysic	1
biosphere	1
black-box	1
brain	1
breast_cancer	1
bridges	1
caffeine	1
calculus	1
cancer_therapy	1
caner	1
canonical	1
cap	1
carcinogenesis	1
carcinoid	1
carcinoma	1
causal	1
cds	1
c-elegans	1
cell-growth	1
cell-interaction	1
cell-movement	1
cellular-automata	1
cellular-networks	1
cellular-response	1
cell-wall	1
cgh	1
chain	1
chemistry	1
chemotactic	1
chicken	1
chip	1
chromosomal-localization	1
chromosomes	1
civil	1
cleavage	1
climate	1
cloud-computing	1
clouds	1
cluster	1
coarse-grained	1
comment	1
community	1
comparative-genomic-hybridization	1
compartments	1
concepts	1
conditional-independence	1
conference	1
confounding	1
conserved	1
consistency	1
content-management-system	1
contrast	1
conversion	1
cooperativity	1
coordination	1
co-regulated	1
course	1
critical	1
curvature	1
curves	1
cystic	1
cystogenesis	1
cytokines	1
cytomics	1
cytoscape	1
cytoskeleton	1
cytosol	1
dag	1
decomposition	1
density-estimation	1
developmental	1
diagnosis	1
diagram	1
dicer	1
dilution	1
dimension-reduction	1
discover	1
discretization	1
discrimination	1
dispersion	1
dissection	1
divergence	1
division	1
dominance	1
drug-delivery	1
drug-resistant	1
dyadic	1
dye	1
egg	1
electrophoresis	1
embryo	1
empirical-bayes	1
energy	1
enterococcus	1
epg-bodies	1
epidemic	1
epidemiology	1
epidermal_growth_factor	1
epigenome	1
equilibrium	1
equipment	1
e-science	1
estimates	1
etiology	1
european	1
examples	1
expectation-maximization	1
exploration	1
exponential	1
exponential-models	1
factors	1
factorsgenetics	1
failure	1
family	1
fat-tailed	1
feature-level	1
field-theory	1
fire	1
fluctuation	1
fluorescent	1
fold-change	1
force-field	1
forest	1
formal	1
frequency_modulation	1
frequentist	1
functional_data_analysis	1
gain-control	1
gapdh	1
gastrin	1
gcrma	1
gel	1
gene-design	1
gene-modules	1
gene-networks	1
generality	1
generator	1
gene-set-analysis	1
gene-silencing	1
genetic_engineering	1
genome-assembly	1
geometry	1
glycan	1
glycobiology	1
glycoprotein	1
goodness-of-fit	1
gram-positive	1
h1n1	1
heterologous	1
heuristics	1
high-precision	1
high-resolution	1
high-signal	1
histone	1
ht_sequencing	1
hybridis	1
hybridized	1
hypertension	1
illumina	1
imaging	1
immunohistochemical	1
immunology	1
impact	1
implementation	1
imprinting	1
imputation	1
index	1
indian-buffet-process	1
in-silico	1
integrity	1
interactis	1
interactive	1
intergenic	1
internal	1
intestine	1
intracellular	1
introns	1
invasive	1
java	1
job	1
kinetic-proofreading	1
kinetics	1
knockout	1
lattice	1
level	1
library	1
life	1
likelihood	1
linearization	1
lipid-membrane	1
logistic	1
log-linear	1
lymphocytes	1
machine	1
macroscopic	1
magnitude	1
manova	1
manual	1
masking	1
mathematical-programming	1
maxent	1
mbei	1
mean	1
measurements	1
measures	1
mechanical	1
medianpolish	1
mediation	1
medical_applications	1
membrane-anchored	1
mesh	1
messengerchemistry	1
messengerchemistrymetabolism	1
meta-analysis	1
metagenomics	1
metaheuristics	1
metastatitic	1
method-validation	1
methylome	1
metric	1
metropolis-hastings	1
microarrays	1
microary	1
microbe	1
microscopy	1
microtubule	1
mitosis	1
model-organism	1
modification	1
modulation	1
module-networks	1
molecular_biology	1
molecules	1
monte-carlo	1
morphogenetic	1
morphology	1
mouse	1
movements	1
mrna-expression	1
ms	1
mulitvariate	1
multichip	1
multidimensional	1
multidisciplinary	1
multi-drug	1
multimodal	1
multisource	1
muscle	1
mutual-information	1
myocardiummetabolism	1
myth	1
naive	1
negative	1
neural	1
neural-networks	1
neuroendocrine_tumours	1
non-gaussian	1
normative	1
nucleosome	1
null-distribution	1
object-oriented-data-analysis	1
object-oriented-design	1
of	1
olfaction	1
oligo-capping	1
oligodt	1
oncogenes	1
oral-medicine	1
organic	1
organization-theory	1
organizing	1
organogenesis	1
oriental	1
original	1
orthologous	1
oscillators	1
oxidative	1
parabolic	1
parameter-degeneracy	1
particle	1
pharmacological	1
phenotypes	1
phosphorylation	1
physical-chemistry	1
physico_chemical	1
pioneering	1
platform	1
poisson	1
polya	1
positive	1
precision	1
preconditioning	1
priming	1
primitives	1
principal	1
principles	1
probes	1
probe-selection	1
probeset	1
probe-summarization	1
productivity	1
prognostic	1
program	1
progression	1
proinflammatory	1
project	1
prokaryotes	1
proliferation	1
promoters	1
proof	1
protection	1
proteins	1
protein-translation	1
proteomic	1
protocol	1
protocols	1
psychophysical	1
p-value	1
quantiles	1
quantum-mechanics	1
quasi	1
reactionmethods	1
reaction-systems	1
re-engineering	1
regulator	1
regulatory	1
regulatory-modules	1
reivew	1
research	1
residual-analysis	1
results	1
retention	1
ribosome	1
rna-metabolism	1
rna-regulation	1
robots	1
robustness	1
rt-pcr	1
sample-size	1
scale-free	1
science	1
scientist	1
screening	1
scripting	1
search	1
segmentation	1
self-organization	1
semantic-similarity	1
sequenc	1
sequence-alignment	1
signaling-pathway	1
signal-processing	1
significance	1
similarity_measures	1
single-cell	1
single-molecule	1
single-target	1
sirna	1
sites	1
smell	1
society	1
spatial	1
spatial-scale	1
spatio-temporal	1
spike-in	1
stability	1
standard-care	1
standardization	1
statistical-mechanics	1
stochastic-process	1
stomach	1
streaming	1
streptococcus	1
surgery	1
symmetry	1
synteny	1
systemic	1
t7	1
t7-primer	1
tags	1
teaching	1
technical	1
termination	1
text-mining	1
theorety	1
thesis	1
time-shift	1
top-down	1
transcription-enhancers	1
transcriptionn	1
transduction	1
transitions	1
trees	1
tuberculosis	1
tumors	1
tumour-growth	1
tumour-suppressor	1
turnover	1
uniqueness	1
universal	1
unlabelled	1
variable_selection	1
variance	1
variants	1
vascular	1
vertebratesgenetics	1
viral-infection	1
virtual	1
virtual_human	1
vision	1
warning	1
western	1
wikipedia	1
workflow	1
workflows	1
writing	1
yeast	1

bertelsen's microarray [at least 200 articles] Export

bertelsen's tags