CiteULike: bertelsen's phenotype [13 articles]

	Computational investigation of epithelial cell dynamic phenotype in vitro [My Copy] Theoretical Biology and Medical Modelling, Vol. 6, No. 1. (28 May 2009), 8. by Sean Kim, Sunwoo Park, Keith Mostov, Jayanta Debnath, C. Anthony Hunt posted to phenotype invitro epithelial dynamics cystogenesis cystic computational cell 3d by bertelsen on 2009-11-23 21:55:47 as
	Simulating non-small cell lung cancer with a multiscale agent-based model [My Copy] Theoretical Biology and Medical Modelling, Vol. 4, No. 1. (21 December 2007), 50. by Zhihui Wang, Le Zhang, Jonathan Sagotsky, Thomas Deisboeck posted to spatio-temporal simulation signal-transduction phenotype pathway multi-scale molecular modelling lung intracellular epidermal_growth_factor dynamics chemotactic cell-migration cancer agent-based by bertelsen on 2009-11-23 21:45:02 as
	An integration of complementary strategies for gene-expression analysis to reveal novel therapeutic opportunities for breast cancer [My Copy] Breast Cancer Research, Vol. 11, No. 4. (28 July 2009), R55. by Andrea Bild, Joel Parker, Adam Gustafson, et al.Chaitanya Acharya, Katherine Hoadley, Carey Anders, P. Kelly Marcom, Lisa Carey, Anil Potti, Joseph Nevins, Charles Perou posted to tumour therapy phenotype pathway-analysis integration gene-expression drug-discovery chemotherapy cancer by bertelsen on 2009-10-06 21:37:06 as along with 1 person srp33
	From Genotype to Phenotype: Systems Biology Meets Natural Variation [My Copy] Science, Vol. 320, No. 5875. (25 April 2008), pp. 495-497. by Philip N. Benfey, Thomas Mitchell-Olds posted to gastric-cancer-group variation systems-biology phenotype natural genotype functional-genomics annotation by bertelsen on 2009-10-03 22:51:36 as along with 18 people and 5 groups balicea maren Keywan slevy03 Zephyrus natstreet stringertheory applebyb zwang bootsy echinotrix ArtemPankin adacier guhjy ashko kaniko brant daed Ondex SABR - Bioenergy project VUMCGenomics Roswell Cancer Crosstalk R.E.A.D Khavkin's lab
	Applications of a rat multiple tissue gene expression data set. [My Copy] Genome research, Vol. 14, No. 4. (April 2004), pp. 742-749. by John R. Walker, Andrew I. Su, David W. Self, et al.John B. Hogenesch, Hilmar Lapp, Rainer Maier, Daniel Hoyer, Graeme Bilbe posted to tissue-specific rats quantitative-trait-loci phenotype microarray gene-expression gene functional-genomics co-expression annotation by bertelsen on 2009-09-28 13:52:43 as along with 2 people grahamc eukfn
	An integrative approach to characterize disease-specific pathways and their coordination: a case study in cancer. [My Copy] BMC genomics, Vol. 9 Suppl 1 (2008) by Min Xu, Ming-Chih C. Kao, Juan Nunez-Iglesias, Joseph R. Nevins, Mike West, Xianghong Jasmine J. Zhou posted to topological phenotype pathways network modules microarray methodology integrative integration information functional-genomics disease data-integration cancer by bertelsen on 2009-09-15 20:56:41 as along with 4 people guhjy Zephyrus cswinburne jfr
	What exactly are genomes, genotypes and phenotypes? And what about phenomes? [My Copy] Journal of theoretical biology, Vol. 186, No. 1. (7 May 1997), pp. 55-63. by M. Mahner, M. Kary posted to phenotype phenome genotype genome definition concepts biology by bertelsen on 2009-09-15 20:17:20 as along with 1 person jasonbobe
	Creation and implications of a phenome-genome network. [My Copy] Nature biotechnology, Vol. 24, No. 1. (10 January 2006), pp. 55-62. by Atul J. Butte, Isaac S. Kohane posted to protein-expression phenotype phenome network multi-scale measurements genome gene-expression experiment environment drug-discovery associations by bertelsen on 2009-09-15 20:15:51 as along with 10 people and 2 groups daforerog BioGeek bpb okarsligil balajis wnpx tag elsiatcase eukfn guhjy Bioinformatics metric_embeddings
	Neutral fitness landscapes in signalling networks [My Copy] Journal of The Royal Society Interface, Vol. 4, No. 12. (22 February 2007), pp. 41-47. by Pau Fernández, Ricard V. Solé posted to systems-biology signaling-system phenotype network mapping genotyping circuits by bertelsen on 2009-09-05 17:09:16 as
	A single gene network accurately predicts phenotypic effects of gene perturbation in Caenorhabditis elegans. [My Copy] Nature genetics, Vol. 40, No. 2. (27 February 2008), pp. 181-188. by Insuk Lee, Ben Lehner, Catriona Crombie, Wendy Wong, Andrew G. Fraser, Edward M. Marcotte posted to drug-discovery genotyping network perturbation phenotype therapeutic by bertelsen on 2009-07-08 23:03:09 as along with 16 people and 1 group ptrobajo thegoose2 AnzaA pegwang koller oryadna tharris guhjy tmmurali balicea capitall roys jiny kintoki meiklej jfr C. elegans / WormBase
	Stochasticity in gene expression: from theories to phenotypes [My Copy] Nat Rev Genet, Vol. 6, No. 6. (10 May 2005), pp. 451-464. by Mads Kaern, Timothy C. Elston, William J. Blake, James J. Collins posted to theory systems-biology stochastic-resonance stochastic review phenotype heterogeneity gene-expression environment disease differentiation development cell by bertelsen on 2009-07-04 20:41:48 as along with 8 people pkm boko4ikameto bcondon ccots wnpx tabu balabu timflutre
	Do two mutually exclusive gene modules define the phenotypic diversity of mammalian smooth muscle? [My Copy] Molecular Genetics and Genomics, Vol. 280, No. 2. (1 August 2008), pp. 127-137. by Erik Larsson, Sean Mclean, Robert Mecham, Per Lindahl, Sven Nelander posted to diversity gene-expression gene-modules integrative mammalian modular muscle phenotype transcriptome by bertelsen on 2009-06-07 19:56:25 as
	Origin of phenotypes: genes and transcripts. [My Copy] Genome research, Vol. 17, No. 6. (June 2007), pp. 682-690. by T. R. Gingeras posted to cds gene phenotype polyadenylation review transcripts by bertelsen on 2008-03-09 17:02:29 as along with 10 people and 4 groups inesdesantiago klo guhjy balicea xico dchughes michC ghattem Garamonfok Jporci Bioinformatics WetBiology G4ID Genetics-of-Gambling

bertelsen's phenotype [13 articles] Export

bertelsen's tags

microarray	223
analysis	129
review	126
gene-expression	124
systems-biology	95
bayesian	92
cancer	78
expression	59
networks	58
affymetrix	48
gene	46
annotation	44
functional-genomics	44
software	44
biology	42
tool	42
model	40
network	38
regulation	38
modelling	37
data	34
bioinformatics	31
disease	29
modeling	29
pathway	28
genechip	27
models	27
rna	27
human	26
polyadenylation	26
drug-discovery	25
clustering	24
multi-scale	24
oligonucleotide	24
gene-regulation	23
ontology	23
biochemical	22
probe	22
inference	21
degradation	20
differential	20
molecular	20
mrna	20
probability	20
transcription	20
dynamic	19
factor-analysis	19
database	18
integrative	18
mathematical	18
probe-level	18
stochastic	18
chemical	17
probabilistic	17
simulation	17
dirichlet-process	16
function	16
integration	16
kinetic	16
nonparametric	16
structure	16
algorithm	15
comparison	15
computational	15
drug	15
experiment	15
genome	15
genomics	15
high-throughput	15
r	15
sampling	15
sequence	15
statistical	15
theory	15
complexity	14
enrichment-analysis	14
gastric	14
noise	14
normalization	14
prediction	14
python	14
regression	14
array	13
biochemical-systems-theory	13
bioconductor	13
classification	13
control	13
framework	13
go	13
interpretation	13
mirna	13
pathways	13
personalized-medicine	13
phenotype	13
protein	13
statistics	13
therapy	13
algorithms	12
clinical	12
hierarchical	12
latent	12
mechanism	12
modules	12
promoter	12
transcriptome	12
computational-biology	11
distribution	11
evolution	11
non-protein-coding	11
oncogenesis	11
quality	11
sparse	11
tumour	11
alternative	10
genetic	10
integrating	10
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modular	10
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3-utr	9
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cell-biology	9
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design	9
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discovery	9
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information	9
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large-scale	9
machine-learning	9
method	9
methodology	9
multiple	9
quality-control	9
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s-system	9
therapeutic	9
transcription-factor	9
visualization	9
background	8
experimental-design	8
heterogeneity	8
hybridization	8
ica	8
insilico	8
linear	8
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time-series	8
transcripts	8
utr	8
agent-based	7
binary	7
development	7
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emergent-properties	7
infection	7
invivo	7
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dynamics	6
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mammalian	6
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ode	4
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3	2
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gamma	2
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octave	2
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organ	2
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parts	2
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pharmacogenomics	2
phenome	2
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plant	2
plausibility	2
poly	2
post-transcription	2
preprocessing	2