CiteULike: bertelsen's transcriptome [12 articles]

	Integrative analysis of the cancer transcriptome [My Copy] Nature Genetics, Vol. 37 Suppl (01 June 2005), pp. S31-S37. by Daniel R. Rhodes, Arul M. Chinnaiyan posted to transcriptome microarray integrative cancer analysis by bertelsen on 2009-10-06 23:46:47 as along with 8 people and 2 groups daforerog cswinburne aalibes textoris ealloza shikin waghsk srp33 BioinfoCIPF GeneGo
	Transcriptome-based determination of multiple transcription regulator activities in Escherichia coli by using network component analysis [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 2. (13 January 2004), pp. 641-646. by Katy C. Kao, Young-Lyeol Yang, Riccardo Boscolo, Chiara Sabatti, Vwani Roychowdhury, James C. Liao posted to transcriptome transcription regulators network factor-analysis component by bertelsen on 2009-10-04 16:51:37 as
	The Human Transcriptome Map: Clustering of Highly Expressed Genes in Chromosomal Domains [My Copy] Science, Vol. 291, No. 5507. (16 February 2001), pp. 1289-1292. by Huib Caron, Barbera Schaik, Merlijn Mee, et al.Frank Baas, Gregory Riggins, Peter Sluis, Marie-Christine Hermus, Ronald Asperen, Kathy Boon, P. A. Voute, Siem Heisterkamp, Antoine Kampen, Rogier Versteeg posted to gastric-cancer-group transcriptome pioneering map human gene-expression clustering chromosomal-expression by bertelsen on 2009-09-30 17:40:12 as along with 3 people florador jpoyatos Garamonfok
	Mapping and quantifying mammalian transcriptomes by RNA-Seq. [My Copy] Nature methods, Vol. 5, No. 7. (30 July 2008), pp. 621-628. by Ali Mortazavi, Brian A. Williams, Kenneth McCue, Lorian Schaeffer, Barbara Wold posted to transcriptome sequencing rna-seq by bertelsen on 2009-09-20 23:04:10 as along with 42 people and 2 groups manduca cthachuk hzoltan jwfoley heliopais juokcho aktas debasis idonaldson darian stubrown dswan ewilban1 mtagaya woodson8 burak jonilaserson inesdesantiago ThomasDOtto n00c GustavoG ghattem vplagnol druvus cfvillalta vmsr poschm dandaman shikin jmcq rschulz lp2 tmcphillips jfr myourshaw megraw GeeSharpMinor caseybrown xingxu guhjy shurjo gdb Bioinformatics SIMR bioinformatics
	Modeling Transcriptome Based on Transcript-Sampling Data [My Copy] PLoS ONE, Vol. 3, No. 2. (20 February 2008), e1659. by Jiang Zhu, Fuhong He, Jing Wang, Jun Yu posted to data modeling transcriptome by bertelsen on 2009-06-08 22:42:23 as along with 1 person GustavoLacerda
	Do two mutually exclusive gene modules define the phenotypic diversity of mammalian smooth muscle? [My Copy] Molecular Genetics and Genomics, Vol. 280, No. 2. (1 August 2008), pp. 127-137. by Erik Larsson, Sean Mclean, Robert Mecham, Per Lindahl, Sven Nelander posted to diversity gene-expression gene-modules integrative mammalian modular muscle phenotype transcriptome by bertelsen on 2009-06-07 19:56:25 as
	Integrating global gene expression analysis and genetics. [My Copy] Advances in genetics, Vol. 60 (2008), pp. 571-601. by C. R. Farber, A. J. Lusis posted to analysis gene-expression genetics integrating microarray review transcriptome by bertelsen on 2009-06-06 20:20:12 as along with 2 people guhjy mfm11
	Transcriptome network component analysis with limited microarray data. [My Copy] Bioinformatics (9 June 2006) by Simon J J. Galbraith, Linh M M. Tran, James C C. Liao posted to analysis component ica microarray network transcriptome by bertelsen on 2009-03-03 22:25:39 as along with 4 people and 1 group snuppepuppan guhjy kengg mariakmejia Plantandetc
	Alternative isoform regulation in human tissue transcriptomes [My Copy] Nature, Vol. 456, No. 7221. (02 November 2008), pp. 470-476. by Eric T. Wang, Rickard Sandberg, Shujun Luo, et al.Irina Khrebtukova, Lu Zhang, Christine Mayr, Stephen F. Kingsmore, Gary P. Schroth, Christopher B. Burge posted to alternative human isoform polyadenylation regulation transcriptome by bertelsen on 2008-12-05 15:40:27 as along with 22 people and 1 group hzoltan ajbattle stubrown jonilaserson tonamswish frohike fenghezi heliopais zxmon21 tanglingfung xingxu felsani wimufi Zephyrus gjuggler eluinka gfliustu vplagnol kieran101 emptyhb rschulz abizar Roswell Cancer Crosstalk
	A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome. [My Copy] Science (New York, N.Y.), Vol. 321, No. 5891. (15 August 2008), pp. 956-960. by M. Sultan, M. H. Schulz, H. Richard, et al.A. Magen, A. Klingenhoff, M. Scherf, M. Seifert, T. Borodina, A. Soldatov, D. Parkhomchuk, D. Schmidt, S. O'Keeffe, S. Haas, M. Vingron, H. Lehrach, M. L. Yaspo posted to alternative gene global human sequencing splicing transcriptome by bertelsen on 2008-12-05 15:39:43 as along with 28 people and 2 groups hzoltan zufar eszczurek n00c dna inesdesantiago ilyashl TRHvidsten poschm ivanek guhjy wutongbin jfr raistrick gracio xingxu psique oelemento Ema reyez caseybrown kjglennie dh0000 GeeSharpMinor balicea djkt ArtemPankin zwang BenosLab Khavkin's lab
	Tag-based approaches for transcriptome research and genome annotation. [My Copy] Nature methods, Vol. 2, No. 7. (July 2005), pp. 495-502. by Matthias Harbers, Piero Carninci posted to annotation cage genome review sage tags transcriptome by bertelsen on 2008-11-18 14:00:36 as along with 5 people amiezoul jbhiatt guhjy gpappas xiaobeizhao
	Silencing the Transcriptome's Dark Matter: Mechanisms for Suppressing Translation of Intergenic Transcripts [My Copy] Molecular Cell, Vol. 22, No. 3. (5 May 2006), pp. 309-316. by Kellie S. Bickel, David R. Morris posted to degradation intergenic transcriptome transcripts by bertelsen on 2008-04-29 23:32:39 as along with 2 people and 3 groups dchughes cdawson G4ID GIG Genetics-of-Gambling

bertelsen's transcriptome [12 articles] Export

bertelsen's tags

microarray	223
analysis	129
review	126
gene-expression	124
systems-biology	95
bayesian	92
cancer	78
expression	59
networks	58
affymetrix	48
gene	46
annotation	44
functional-genomics	44
software	44
biology	42
tool	42
model	40
network	38
regulation	38
modelling	37
data	34
bioinformatics	31
disease	29
modeling	29
pathway	28
genechip	27
models	27
rna	27
human	26
polyadenylation	26
drug-discovery	25
clustering	24
multi-scale	24
oligonucleotide	24
gene-regulation	23
ontology	23
biochemical	22
probe	22
inference	21
degradation	20
differential	20
molecular	20
mrna	20
probability	20
transcription	20
dynamic	19
factor-analysis	19
database	18
integrative	18
mathematical	18
probe-level	18
stochastic	18
chemical	17
probabilistic	17
simulation	17
dirichlet-process	16
function	16
integration	16
kinetic	16
nonparametric	16
structure	16
algorithm	15
comparison	15
computational	15
drug	15
experiment	15
genome	15
genomics	15
high-throughput	15
r	15
sampling	15
sequence	15
statistical	15
theory	15
complexity	14
enrichment-analysis	14
gastric	14
noise	14
normalization	14
prediction	14
python	14
regression	14
array	13
biochemical-systems-theory	13
bioconductor	13
classification	13
control	13
framework	13
go	13
interpretation	13
mirna	13
pathways	13
personalized-medicine	13
phenotype	13
protein	13
statistics	13
therapy	13
algorithms	12
clinical	12
hierarchical	12
latent	12
mechanism	12
modules	12
promoter	12
transcriptome	12
computational-biology	11
distribution	11
evolution	11
non-protein-coding	11
oncogenesis	11
quality	11
sparse	11
tumour	11
alternative	10
genetic	10
integrating	10
mcmc	10
mixture	10
modular	10
proteomics	10
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systems	10
test	10
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3-utr	9
biomedical	9
biophysics	9
cell-biology	9
data-integration	9
design	9
diagnostic	9
discovery	9
dna	9
hypothesis	9
information	9
interactions	9
large-scale	9
machine-learning	9
method	9
methodology	9
multiple	9
quality-control	9
selection	9
s-system	9
therapeutic	9
transcription-factor	9
visualization	9
background	8
experimental-design	8
heterogeneity	8
hybridization	8
ica	8
insilico	8
linear	8
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methods	8
overview	8
rnai	8
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systemic-computation	8
time-series	8
transcripts	8
utr	8
agent-based	7
binary	7
development	7
drug-target	7
emergent-properties	7
infection	7
invivo	7
mapping	7
multivariate	7
organization	7
pathology	7
physiology	7
rats	7
specificity	7
tiling	7
time-course	7
translation	7
webservices	7
application	6
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computation	6
computing	6
databases	6
dynamics	6
epigenetic	6
evolutionary-computation	6
feature	6
genetics	6
graphs	6
mammalian	6
matrix-factorization	6
metabolomics	6
nonlinear	6
pathway-analysis	6
pattern	6
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primary	6
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time	5
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endolymphatic-sac	4
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exons	4
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ode	4
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web	4
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chemical-master-equation	3
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gene-circuits	3
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resource	3
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snp	3
stochastic-resonance	3
structural-biology	3
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fractal	2
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gamma	2
generative	2
genotype	2
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health	2
heart	2
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molecular-connectivity-map	2
multi-target	2
mutations	2
neuroscience	2
nonequilibrium	2
non-specific	2
nucleic	2
numerical	2
octave	2
oncogene-addiction	2
opensource	2
organ	2
parallel	2
parts	2
p-bodies	2
perspective	2
pharmacogenomics	2
phenome	2
physiome	2
pipelines	2
plant	2
plausibility	2
poly	2
post-transcription	2
preprocessing	2