biomcgary's evolution [91 articles] Export

Recent papers added to biomcgary's library classified by the tag evolution. You can also see everyone's evolution.

	Climbing Mount Probable: Mutation as a Cause of Nonrandomness in Evolution [My Copy] J Hered, Vol. 100, No. 5. (1 September 2009), pp. 637-647. by Arlin Stoltzfus, Lev Y. Yampolsky posted to evolution codon_bias biased_mutation amino_acid_substitution by biomcgary on 2009-11-13 21:13:06 as
	Evolution of genes and genomes on the Drosophila phylogeny [My Copy] Nature, Vol. 450, No. 7167. (08 November 2007), pp. 203-218. posted to phylogeny genome evolution drosophila comparative_genomics by biomcgary on 2009-11-12 17:20:51 as along with 37 people and 5 groups aaltenburger nuttpo daveGerrard Anachff GustavoLacerda mqbphcw3 rpetrenko gwallau chica jlncdr aprasad gjuggler lizbiogen jbsaltz druvus pradiptaray pengchy operon tmmurali indigoviolet djkt timflutre stajich zwang Garamonfok lp2 CharlesM hpaces caseybrown emptyhb urgi noor PetrovLab isimpson balicea cisevol hdopazo Bioinformatics EisenLab Mycology BergmanLab Drosophila-Genetics-Genomics-2008
	Turning a hobby into a job: How duplicated genes find new functions [My Copy] Nat Rev Genet, Vol. 9, No. 12. (01 December 2008), pp. 938-950. by Gavin C. Conant, Kenneth H. Wolfe posted to yeast subfunctionalization review protein_function neo-functionalization genome_duplication gene_duplication gene_deletion evolution_rate evolution dosage_effect arabidopsis by biomcgary on 2009-11-12 17:13:55 as along with 12 people and 3 groups Annab clearbluespring ajaymalik ilyashl azazello pinney gderwin Zephyrus bootsy strands dchughes pkonings Bioinformatics Roswell Cancer Crosstalk R.E.A.D
	Spider Web Glue: Two Proteins Expressed from Opposite Strands of the Same DNA Sequence [My Copy] Biomacromolecules, Vol. 10, No. 10. (12 October 2009), pp. 2852-2856. by Omer Choresh, Battuya Bayarmagnai, Randolph V. Lewis posted to ultraconserved_sequence spider protein orf evolutionary_constraint evolution bi-directional_orf by biomcgary on 2009-11-10 15:44:47 as
	Evolution of biomolecular networks \|[mdash]\| lessons from metabolic and protein interactions [My Copy] Nat Rev Mol Cell Biol, Vol. 10, No. 11. (01 November 2009), pp. 791-803. by Takuji Yamada, Peer Bork posted to review protein-protein_interaction network_evolution evolutionary_constraint evolution by biomcgary on 2009-10-28 18:52:23 as along with 6 people venancio colmryan pinney nzm pedrobeltrao tmmurali
	Evolution of Eukaryotic Transcription Circuits [My Copy] Science, Vol. 319, No. 5871. (28 March 2008), pp. 1797-1799. by Brian B. Tuch, Hao Li, Alexander D. Johnson posted to yeast transcription selection rewiring review evolution by biomcgary on 2009-10-26 20:27:59 as along with 6 people roys balabu emptyhb AbnerCYH djkt bpcusack
	The origins of multicellularity and the early history of the genetic toolkit for animal development. [My Copy] Annual review of genetics, Vol. 42, No. 1. (2008), pp. 235-251. by Antonis Rokas posted to toolkit rokas multicellularity metazoan evolution by biomcgary on 2009-10-13 20:35:24 as along with 1 person gjuggler
	Harnessing genomics for evolutionary insights. [My Copy] Trends in ecology & evolution (Personal edition), Vol. 24, No. 4. (6 April 2009), pp. 192-200. by Antonis Rokas, Patrick Abbot posted to rokas genomics evolution by biomcgary on 2009-10-13 20:32:52 as along with 7 people GustavoLacerda jlin robsyme druvus dchughes semrich inquil
	Recent de novo origin of human protein-coding genes. [My Copy] Genome research, Vol. 19, No. 10. (2 October 2009), pp. 1752-1759. by David G. Knowles, Aoife McLysaght posted to protein primate orphan_gene novel_gene human evolution by biomcgary on 2009-10-08 21:02:57 as along with 9 people and 2 groups rshe psique xianjun gjuggler megraw fenghezi avilella bpcusack djkt Journal picks Ensembl Compara citations
	From molecular to modular cell biology. [My Copy] Nature, Vol. 402, No. 6761 Suppl. (2 December 1999), pp. C47-C52. by L. H. Hartwell, J. J. Hopfield, S. Leibler, A. W. Murray posted to review module_rewiring module modularity evolutionary_constraint evolution by biomcgary on 2009-09-30 21:57:46 as along with 27 people and 8 groups antonkratz dagmar poirel bertelsen Scis0000002 daforerog jporternj chihchun_chen babakap AurelienMazurie rhem1224 balajis nuke2005 rubendrr wnpx i41m adepace javierFellow mmt mirzazadeh carmaus dejori carlk awooga tvdbulck vsausg dragonrez EisenLab TCR_Signaling cytoskeleton-and-afm SysbioMPI-TCells dIEMoSIRIS ic4 generif_paper MoSi-Rostock
	Developmental and species-divergent globin switching are driven by BCL11A [My Copy] Nature, Vol. 460, No. 7259. (27 August 2009), pp. 1093-1097. by Vijay G. Sankaran, Jian Xu, Tobias Ragoczy, et al.Gregory C. Ippolito, Carl R. Walkley, Shanna D. Maika, Yuko Fujiwara, Masafumi Ito, Mark Groudine, M. A. Bender, Philip W. Tucker, Stuart H. Orkin posted to transcription rewiring mouse human hemoglobin gene_regulation gene_expression evolution development by biomcgary on 2009-08-26 19:31:20 as along with 1 person absterga
	An Expressed Fgf4 Retrogene Is Associated with Breed-Defining Chondrodysplasia in Domestic Dogs [My Copy] Science, Vol. 325, No. 5943. (21 August 2009), pp. 995-998. by Heidi G. Parker, Bridgett M. Vonholdt, Pascale Quignon, et al.Elliott H. Margulies, Stephanie Shao, Dana S. Mosher, Tyrone C. Spady, Abdel Elkahloun, Michele Cargill, Paul G. Jones, Cheryl L. Maslen, Gregory M. Acland, Nathan B. Sutter, Keiichi Kuroki, Carlos D. Bustamante, Robert K. Wayne, Elaine A. Ostrander posted to retrotransposition retrogene phenotype growth_factor gene_duplication evolution dog by biomcgary on 2009-08-25 22:01:28 as along with 3 people and 1 group qayub rschulz jbhiatt Journal picks
	On the Accessibility of Adaptive Phenotypes of a Bacterial Metabolic Network [My Copy] PLoS Comput Biol, Vol. 5, No. 8. (21 August 2009), e1000472. by Wilfred Ndifon, Joshua B. Plotkin, Jonathan Dushoff posted to neutral_network mutation metabolism information_theory information genotype-phenotype_map evolutionary_constraint evolution adaptive_landscape adaptation by biomcgary on 2009-08-24 23:45:58 as along with 2 people and 1 group zwang djkt iSEEM
	Modularity of stress response evolution [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 21. (27 May 2008), pp. 7500-7505. by Amoolya H. Singh, Denise M. Wolf, Peggy Wang, Adam P. Arkin posted to stress_genes module_rewiring module modularity evolution by biomcgary on 2009-08-15 20:11:26 as along with 4 people roys erel10 deanmalmgren Retchless
	Programming cells by multiplex genome engineering and accelerated evolution [My Copy] Nature, Vol. 460, No. 7257. (26 July 2009), pp. 894-898. by Harris H. Wang, Farren J. Isaacs, Peter A. Carr, et al.Zachary Z. Sun, George Xu, Craig R. Forest, George M. Church posted to systems_engineering systems_biology synthetic_biology protein_engineering mutation metabolism homologous_recombination genome evolution e_coli directional_selection designed_mutations cellular_reprogramming by biomcgary on 2009-08-12 21:38:51 as along with 13 people and 2 groups abhishek_tiwari TorstenWaldminghaus jdoconnell dswan Annab badi druvus dayjm pkonings zwang phoenixzxl djkt dbikard Journal picks Synthetic Biology
	Natural selection: The evolution of cancer : Nature News [My Copy] by Cancer Cells Vary; They Compete; The Fittest Survive posted to cancer evolution by biomcgary on 2009-08-10 20:44:15 as
	Rapid Evolution of Sex Pheromone-Producing Enzyme Expression in Drosophila [My Copy] PLoS Biol, Vol. 7, No. 8. (4 August 2009), e1000168. by Troy R. Shirangi, Héloïse D. Dufour, Thomas M. Williams, Sean B. Carroll posted to convergent_evolution drosophila evolution gene_expression gene_loss gene_regulation indel mutation pheremone selection_sexual speciation by biomcgary on 2009-08-04 17:42:48 as along with 2 people and 1 group daveGerrard djkt BergmanLab
	Evolution in protein interaction networks: co-evolution, rewiring and the role of duplication. [My Copy] Biochemical Society transactions, Vol. 37, No. Pt 4. (August 2009), pp. 768-771. by David L. Robertson, Simon C. Lovell posted to co-evolution evolution evolutionary_constraint evolvability gene_duplication network network_evolution predictive_biology protein-protein_interaction by biomcgary on 2009-07-28 17:29:25 as along with 1 person chica
	The Dynamics of Phenotypic Change and the Shrinking Sheep of St. Kilda [My Copy] Science, Vol. 325, No. 5939. (24 July 2009), pp. 464-467. by Arpat Ozgul, Shripad Tuljapurkar, Tim G. Benton, Josephine M. Pemberton, Tim H. Clutton-Brock, Tim Coulson posted to adaptation ecology environmental_effects evolution phenotype selection variation vertebrate by biomcgary on 2009-07-24 16:59:09 as along with 2 people Fantozzi roodubh
	Partial penetrance facilitates developmental evolution in bacteria [My Copy] Nature, Vol. 460, No. 7254. (05 July 2009), pp. 510-514. by Avigdor Eldar, Vasant K. Chary, Panagiotis Xenopoulos, et al.Michelle E. Fontes, Oliver C. Loson, Jonathan Dworkin, Patrick J. Piggot, Michael B. Elowitz posted to bacteria development evo-devo evolution genetic_penetrance morphology noise sporulation stochastic_variation by biomcgary on 2009-07-24 15:22:15 as along with 8 people and 1 group ellarond bpcusack psique absterga maren phoenixzxl jbhiatt jjray Journal picks
	Darwinian evolution in the light of genomics [My Copy] Nucl. Acids Res., Vol. 37, No. 4. (1 March 2009), pp. 1011-1034. by Eugene V. Koonin posted to adaptation complexity evolution evolution_rate gene_expression neutral_drift purifying_selection systems_biology by biomcgary on 2009-07-21 20:33:40 as along with 23 people and 2 groups jasontsai vvoorr qayub michaelbarton polivares pawelsobko Zephyrus gwallau dayjm nurban natstreet druvus mlog tomhebbron haloin VGreiff lizbiogen inquil lp2 gjuggler guhjy sebastien_vigneau sjcockell Journal picks LabDros
	Strategies for reliable exploitation of evolutionary concepts in high throughput biology. [My Copy] Evolutionary bioinformatics online, Vol. 4 (2008), pp. 121-137. by Anthony Levasseur, Pierre Pontarotti, Olivier Poch, Julie D. Thompson posted to evolution functional_annotation functional_genomics functional_network phylogenetic_profiling phylogenomics protein-protein_interaction review by biomcgary on 2009-07-21 20:21:57 as along with 1 person pablocarb
	Cohesive versus Flexible Evolution of Functional Modules in Eukaryotes [My Copy] PLoS Comput Biol, Vol. 5, No. 1. (30 January 2009), e1000276. by Like Fokkens, Berend Snel posted to co-evolution dispensability eukaryote evolution modularity module network phylogenetic_profiling phylogenomics protein_complex by biomcgary on 2009-07-21 20:00:25 as along with 2 people saket grahamc
	Adaptive prediction of environmental changes by microorganisms [My Copy] Nature, Vol. 460, No. 7252. (17 June 2009), pp. 220-224. by Amir Mitchell, Gal H. Romano, Bella Groisman, et al.Avihu Yona, Erez Dekel, Martin Kupiec, Orna Dahan, Yitzhak Pilpel posted to adaptation e_coli environmental_sensing evolution learning by biomcgary on 2009-07-16 21:46:40 as along with 8 people and 1 group yyfwuhan kinestetika sriesenfeld timotay izuleta djkt jjray michaelbarton iSEEM
	Co-evolution and co-adaptation in protein networks. [My Copy] FEBS letters, Vol. 582, No. 8. (9 April 2008), pp. 1225-1230. by D. Juan, F. Pazos, A. Valencia posted to co-adaptation co-evolution compensatory_mutations evolution evolutionary_constraint network phylogenetics protein-protein_interaction by biomcgary on 2009-07-13 21:51:13 as along with 3 people and 1 group zwang phoenixzxl smgomez GomezLab
	Evolution of the Turtle Body Plan by the Folding and Creation of New Muscle Connections [My Copy] Science, Vol. 325, No. 5937. (10 July 2009), pp. 193-196. by Hiroshi Nagashima, Fumiaki Sugahara, Masaki Takechi, et al.Rolf Ericsson, Yoshie Kawashima-Ohya, Yuichi Narita, Shigeru Kuratani posted to evo-devo evolution heterotopy turtle by biomcgary on 2009-07-10 21:10:04 as
	The inference of protein-protein interactions by co-evolutionary analysis is improved by excluding the information about the phylogenetic relationships [My Copy] Bioinformatics, Vol. 21, No. 17. (30 June 2005), pp. bti564-3489. by Tetsuya Sato, Yoshihiro Yamanishi, Minoru Kanehisa, Hiroyuki Toh posted to distance_matrix evolution mirror_tree phylogenetics protein-protein_interaction by biomcgary on 2009-07-09 22:06:48 as along with 2 people jperkins cjeans
	Evolution of genetic networks underlying the emergence of thymopoiesis in vertebrates. [My Copy] Cell, Vol. 138, No. 1. (10 July 2009), pp. 186-197. by Baubak Bajoghli, Narges Aghaallaei, Isabell Hess, et al.Immanuel Rode, Nikolai Netuschil, Boon-Hui H. Tay, Byrappa Venkatesh, Jr-Kai K. Yu, Stacy L. Kaltenbach, Nicholas D. Holland, Dagmar Diekhoff, Christiane Happe, Michael Schorpp, Thomas Boehm posted to agnathan evo-devo evolution gene_network immune_system lamprey lymphocyte network_evolution thymus vertebrate by biomcgary on 2009-07-03 21:26:40 as along with 2 people yyfwuhan leliavski
	The Hedgehog Signaling Pathway: Where Did It Come From? [My Copy] PLoS Biol, Vol. 7, No. 6. (30 June 2009), e1000146. by George Hausmann, Christian von Mering, Konrad Basler posted to evo-devo evolution signalling_cascade steroid by biomcgary on 2009-07-01 01:04:08 as along with 5 people robfsouza kiekyon reyez leemond31 kshameer
	Comparative genomic analysis of C4 photosynthetic pathway evolution in grasses [My Copy] Genome Biology, Vol. 10, No. 6. (23 June 2009), R68. by Xiyin Wang, Udo Gowik, Haibao Tang, John Bowers, Peter Westhoff, Andrew Paterson posted to adaptation c3 c4 comparative_genomics evolution gene_fusion genome_duplication metabolism neo-functionalization photosynthesis redundancy tandem_duplication by biomcgary on 2009-06-30 17:48:43 as along with 1 person and 1 group ArtemPankin Khavkin's lab
	The role of geography in human adaptation. [My Copy] PLoS genetics, Vol. 5, No. 6. (5 June 2009), e1000500. by Graham Coop, Joseph K. Pickrell, John Novembre, et al.Sridhar Kudaravalli, Jun Li, Devin Absher, Richard M. Myers, Luigi Luca L. Cavalli-Sforza, Marcus W. Feldman, Jonathan K. Pritchard posted to adaptation evolution human neutral_drift selection_positive selective_sweep by biomcgary on 2009-06-30 01:16:10 as along with 11 people memerman pawelsobko leemond31 daforerog aprasad dinnes roodubh ilyashl reyez djkt bertrandservin
	Evolution of phosphoregulation: comparison of phosphorylation patterns across yeast species. [My Copy] PLoS biology, Vol. 7, No. 6. (16 June 2009), e1000134. by Pedro Beltrao, Jonathan C. Trinidad, Dorothea Fiedler, et al.Assen Roguev, Wendell A. Lim, Kevan M. Shokat, Alma L. Burlingame, Nevan J. Krogan posted to evolution evolution_rate network phenotype phosphorylation protein-protein_interaction variation yeast by biomcgary on 2009-06-29 22:09:49 as along with 14 people psique dakelley robfsouza emptyhb mingzhi leemond31 chica tmmurali kiekyon neils bpcusack djkt renatomilani ematsen
	The conservation and evolutionary modularity of metabolism [My Copy] Genome Biology, Vol. 10, No. 6. (12 June 2009), R63. by Jose P. Alvarez, Chris Sanford, John Parkinson posted to co-conservation enzyme eukaryote evolution kegg metabolism modularity network secondary_metabolism by biomcgary on 2009-06-27 00:18:39 as along with 9 people and 1 group venancio carlk adampah bdessailly barriot michaelbarton Winzer tomhebbron grahamc Orengo Group Journal Picks
	The emerging conceptual framework of evolutionary developmental biology. [My Copy] Nature, Vol. 415, No. 6873. (14 February 2002), pp. 757-764. by W. Arthur posted to co-option development developmental_bias developmental_reprogramming evo-devo evolution evolutionary_constraint evolutionary_stasis exaptation internal_selection review selection by biomcgary on 2009-04-20 22:22:34 as along with 4 people dayjm bayesian balicea shivakumar3_14
	Contrasting Developmental Trajectories in the Earliest Known Tetrapod Forelimbs [My Copy] Science, Vol. 324, No. 5925. (17 April 2009), pp. 364-367. by Viviane Callier, Jennifer A. Clack, Per E. Ahlberg posted to acanthostega convergent_evolution development evolution ichthyostega limb parallel_evolution tetrapod vertebrate water-land_transition by biomcgary on 2009-04-20 21:07:23 as
	Nuclear Architecture of Rod Photoreceptor Cells Adapts to Vision in Mammalian Evolution [My Copy] Vol. 137, No. 2. (17 April 2009), pp. 356-368. by Irina Solovei, Moritz Kreysing, Christian Lanctôt, et al.Süleyman Kösem, Leo Peichl, Thomas Cremer, Jochen Guck, Boris Joffe posted to chromatin chromosome_distribution chromosome_structure convergent_evolution evolution mammalian_evolution nocturnal photoreceptor retina vision by biomcgary on 2009-04-20 20:23:42 as along with 2 people and 1 group daveGerrard fenghezi BergmanLab
	Sending signals dynamically. [My Copy] Science (New York, N.Y.), Vol. 324, No. 5924. (10 April 2009), pp. 198-203. by Robert G. Smock, Lila M. Gierasch posted to environmental_sensing evolution information review signal_integration signalling_cascade systems_biology by biomcgary on 2009-04-16 17:02:46 as along with 7 people and 1 group guhjy kjell chica pablocarb sobolevnrm renatomilani hsekiguc baker-group
	The transferome of metabolic genes explored: analysis of the horizontal transfer of enzyme encoding genes in unicellular eukaryotes. [My Copy] Genome biology, Vol. 10, No. 4. (15 April 2009), R36. by John W. Whitaker, Glenn A. McConkey, David R. Westhead posted to enzyme eukaryote evolution horizontal_gene_transfer metabolism by biomcgary on 2009-04-15 20:17:22 as along with 6 people and 1 group barriot johnwhitaker michaelbarton Thaverkamp cmzmasek neils Microbial-Ecology
	Protein Dynamism and Evolvability [My Copy] Science, Vol. 324, No. 5924. (10 April 2009), pp. 203-207. by Nobuhiko Tokuriki, Dan S. Tawfik posted to evolution evolvability protein protein_fold protein_function protein_structure robustness by biomcgary on 2009-04-15 17:40:58 as along with 20 people and 3 groups dfdong tomhebbron anuragsethi ahmetbakan kevinchannon klexa lauresultan dbikard ibuch ramiro2k barry pablocarb ramanuja sobolevnrm hsekiguc VGreiff phoenixzxl zwang jdoconnell paulschlesinger structural_bioinformatics McCammon baker-group
	Devonian arthrodire embryos and the origin of internal fertilization in vertebrates [My Copy] Nature, Vol. 457, No. 7233. (26 February 2009), pp. 1124-1127. by John A. Long, Kate Trinajstic, Zerina Johanson posted to evolution internal_fertilization paleontology placenta placoderm vertebrate viviparity by biomcgary on 2009-04-01 17:00:28 as
	Palaeontology: Birth of the jawed vertebrates [My Copy] Nature, Vol. 457, No. 7233. (25 February 2009), pp. 1094-1095. by Per E. Ahlberg posted to evolution paleontology placenta placoderm vertebrate by biomcgary on 2009-04-01 16:55:05 as
	Conversion of the 2 Cl/1 H+ antiporter ClC-5 in a NO3/H+ antiporter by a single point mutation [My Copy] (08 January 2009) by Giovanni Zifarelli, Michael Pusch posted to animal evolution ion_transport mutation plant protein_function proton_motive_force by biomcgary on 2009-03-26 18:05:06 as along with 1 person franklu310
	A single regulatory gene is sufficient to alter bacterial host range [My Copy] Nature, Vol. 458, No. 7235. (12 March 2009), pp. 215-218. by Mark J. Mandel, Michael S. Wollenberg, Eric V. Stabb, Karen L. Visick, Edward G. Ruby posted to bacteria evolution gene_regulation speciation symbiosis by biomcgary on 2009-03-26 17:57:31 as along with 5 people and 1 group kinestetika djkt neils sconlan flybell iSEEM
	Sm/Lsm Genes Provide a Glimpse into the Early Evolution of the Spliceosome [My Copy] PLoS Comput Biol, Vol. 5, No. 3. (13 March 2009), e1000315. by Stella Veretnik, Christopher Wills, Philippe Youkharibache, Ruben E. Valas, Philip E. Bourne posted to evolution protein_reconstruction spliceosome splicing by biomcgary on 2009-03-24 20:17:32 as
	Comparative Functional Analysis of the Caenorhabditis elegans and Drosophila melanogaster Proteomes [My Copy] PLoS Biol, Vol. 7, No. 3. (3 March 2009), e1000048. by Sabine P. Schrimpf, Manuel Weiss, Lukas Reiter, et al.Christian H. Ahrens, Marko Jovanovic, Johan Malmström, Erich Brunner, Sonali Mohanty, Martin J. Lercher, Peter E. Hunziker, Ruedi Aebersold, Christian von Mering, Michael O. Hengartner posted to comparative_proteomics evolution proteome by biomcgary on 2009-03-17 21:11:55 as along with 10 people and 1 group aktas robfsouza ogishima coela gurprit_raunu cajunsushi gerodono idoerg renatomilani bpcusack Marcotte_Lab
	Wings, Horns, and Butterfly Eyespots: How Do Complex Traits Evolve? [My Copy] PLoS Biology, Vol. 7, No. 2. (1 February 2009), e37. by Antónia Monteiro, Ondrej Podlaha posted to co-option complex_traits evo-devo evolution gene_expression modularity network phenotype pleiotropy by biomcgary on 2009-03-17 21:07:25 as along with 7 people carlk maximilianh provero stevanspringer skumagai idoerg jjray
	From genotype to phenotype: buffering mechanisms and the storage of genetic information [My Copy] BioEssays, Vol. 22, No. 12. (2000), pp. 1095-1105. by Suzanne L. Rutherford posted to buffering evo-devo evolution genotype information phenotype variation by biomcgary on 2009-03-17 20:55:20 as
	The braincase and jaws of a Devonian \|[lsquo]\|acanthodian\|[rsquo]\| and modern gnathostome origins [My Copy] Nature, Vol. 457, No. 7227. (15 January 2009), pp. 305-308. by Martin D. Brazeau posted to evolution gnathostome paleontology paraphyly placoderm by biomcgary on 2009-03-09 21:21:47 as along with 1 person cmzmasek
	Endless Forms: The Evolution of Gene Regulation and Morphological Diversity [My Copy] Cell, Vol. 101, No. 6. (9 June 2000), pp. 577-580. by Sean B. Carroll posted to development evolution gene_expression gene_regulation morphology toolkit by biomcgary on 2009-02-23 20:46:52 as
	An Ancient Gene Network Is Co-opted for Teeth on Old and New Jaws [My Copy] PLoS Biology by Gareth J. Fraser, Darrin C. Hulsey, Ryan F. Bloomquist, Kristine Uyesugi, Nancy R. Manley, Todd J. Streelman posted to cichlid co-option evolution gene_expression jaw morphogenesis network teeth by biomcgary on 2009-02-13 16:19:27 as

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evolution	91
network	43
protein-protein_interaction	42
gene_expression	35
evolution_rate	29
yeast	29
gene_duplication	28
evolutionary_constraint	25
phenotype	24
systems_biology	23
metabolism	22
development	21
variation	21
phylogenetics	19
selection	19
module	18
adaptation	16
convergent_evolution	16
fungi	16
biased_mutation	14
genome	14
modularity	14
mutation	14
mutation_rate	14
phylogenomics	14
predictive_biology	14
evo-devo	13
network_evolution	13
transcription	13
bacteria	12
genome_duplication	12
protein	12
review	12
cancer	11
co-evolution	11
drosophila	11
paralog	11
robustness	11
selection_positive	11
e_coli	10
gene_regulation	10
signalling_cascade	10
disease	9
human	9
transcription_factor	9
aggregation	8
morphology	8
ortholog	8
phenotype_prediction	8
plant	8
population_genetics	8
protein_structure	8
transcription_factor_binding_site	8
artificial_selection	7
functional_network	7
gene_deletion	7
horizontal_gene_transfer	7
noise	7
protein_complex	7
rewiring	7
rokas	7
speciation	7
splicing	7
transposon	7
ageing	6
co-option	6
essentiality	6
evolvability	6
kinase	6
mitochondria	6
module_rewiring	6
ncrna	6
network_genetic	6
neuron	6
neutral_drift	6
retrotransposition	6
rna	6
sequence_alignment	6
sequencing	6
stem_cell	6
stochastic_variation	6
vertebrate	6
biased_mutations	5
biased_recombination	5
cell_cycle	5
chromatin	5
chromosomal_rearrangement	5
correlated_evolution	5
environmental_sensing	5
eukaryote	5
gene_loss	5
gene_network	5
homologous_recombination	5
indel	5
intron	5
mammalian_evolution	5
metazoan_phylogeny	5
mitochondrial_dna	5
orthogroup	5
parallel_evolution	5
plasticity	5
protein_function	5
protein_translation	5
qtl	5
regulatory_network	5
repetitive_sequence	5
sequence_divergence	5
symbiosis	5
virus	5
apoptosis	4
biology	4
c_elegans	4
chaperone	4
codon_bias	4
comparative_genomics	4
dna_repair	4
enzyme	4
evolutionary_stasis	4
expression	4
feedback_negative	4
gene_redundant	4
genetic_variation	4
mating_pathway	4
maximum_likelihood	4
model_organism	4
mrna	4
mutation_hotspot	4
neutral_mutation	4
paleontology	4
phylogenetic_methods	4
protein_engineering	4
redundancy	4
secretion	4
subfunctionalization	4
toolkit	4
aneuploidy	3
antibiotic	3
blood	3
brain	3
buffering	3
centromere	3
chromosome_structure	3
co-adaptation	3
comparative_network	3
compensatory_mutations	3
designed_mutations	3
dna_damage	3
dna-protein_interaction	3
domestication	3
dosage_effect	3
drug	3
dscam	3
ecology	3
endothelium	3
environmental	3
environmental_effects	3
epistasis	3
eqtl	3
feedback_positive	3
flagella	3
frameshift	3
functional_annotation	3
gene_silencing	3
genetic_load	3
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genotype-phenotype_map	3
germline_cell	3
growth_rate	3
heirarchy	3
heterozygosity	3
hybrid_vigor	3
information	3
junk_dna	3
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mass_spectroscopy	3
morphogenesis	3
mouse	3
natural_selection	3
neo-functionalization	3
neutral_network	3
orphan_gene	3
phylogeny	3
placenta	3
placoderm	3
primate	3
protein_fold	3
protein_folding	3
proteome	3
purifying_selection	3
reductive_evolution	3
ribosome	3
rnai	3
snake	3
somatic_cell	3
splicing_alternative	3
stress_genes	3
synteny	3
systems_engineering	3
telomere	3
testis	3
amyloid	2
angiogenesis	2
animal	2
antisense	2
arabidopsis	2
archea	2
bayesian_methods	2
bilaterian	2
breast_cancer	2
cell_size	2
cellular_reprogramming	2
chemotaxis	2
chromosome	2
chromosome_distribution	2
cichlid	2
complexity	2
conserved_amino_acid_change	2
database	2
disordered_protein	2
dispensability	2
diversification	2
dna_methylation	2
dnds	2
dog	2
epigenetic_inheritance	2
essentiality_conditional	2
evidence	2
extinction	2
faulty_assumptions	2
fitness	2
functional_genomics	2
galactose	2
gene_activation	2
gene_buffering	2
gene_coexpression	2
gene_family	2
gene_function	2
gene_ontology	2
gene_repression	2
genome_defense	2
genomics	2
heat_shock	2
hemoglobin	2
homomers	2
hormone	2
hub_protein	2
immune_system	2
introns	2
ion_transport	2
ligand	2
lymphocyte	2
marcotte	2
metazoan	2
mirna	2
mirror_tree	2
modeling	2
model_of_evolution	2
mrna_decay	2
multicellularity	2
network_reconstruction	2
nonconserved_functional_dna	2
novel_gene	2
nucleotide_repeats	2
number_systems	2
obesity	2
osmoregulation	2
overexpression	2
pathogen	2
pathogenesis	2
pathway	2
phylogenetic	2
phylogenetic_profiling	2
physiology	2
placozoan	2
pleiotropy	2
polymorphism	2
polyploid	2
population_size	2
prebiotic_evolution	2
probabilistic_model	2
protein_domain	2
protein_reconstruction	2
proton-motive-force	2
pseudogene	2
quorum_sensing	2
rare_genomic_changes	2
recombination	2
repeat_expansion	2
retrogene	2
scaffold_protein	2
secondary_metabolism	2
self-organization	2
signal_integration	2
sporulation	2
statistics	2
sulfur_mustard	2
synonymous_site	2
synthetic_biology	2
synthetic_lethal	2
synthetic_rescue	2
systems	2
teeth	2
tissue_specific	2
transposable_element	2
triplet_repeat	2
unknown_mechanism	2
usefulness_of_evolutionary_theory	2
viviparity	2
abc_transporter	1
acanthostega	1
adaptive_landscape	1
agnathan	1
alu	1
amino_acid_substitution	1
ammonods	1
angiosperm	1
annotation	1
anthropology	1
antibody	1
antioxidant	1
anti-viral_immunity	1
aphid	1
archeaology	1
asexual_reproduction	1
atavism	1
atp	1
backup	1
bacteriophage	1
baleen	1
bandwagon_effect	1
base_excision_repair	1
bet-hedging	1
bias	1
bi-directional_orf	1
binding_site	1
bioengineering	1
biogeography	1
biology_education	1
biophysics	1
biotech	1
blastoderm	1
book_review	1
c3	1
c4	1
canalization	1
capacitor	1
catalyst	1
cell-cell_adhesion	1
cell_polarity	1
cell_signalling	1
cell_specification	1
cellular	1
cellular_storage	1
cell_wall	1
cephalopods	1
chemosensory	1
chipseq	1
chip-seq	1
chromosome_y	1
cilia	1
ciliate	1
circadian_rhythm	1
clade-specific	1
club	1
coat_color	1
co-conservation	1
coelomata	1
colonization	1
combination_therapy	1
communication_bacterial	1
comparative_metabolomics	1
comparative_proteomics	1
competitive_binding	1
competitive_interaction	1
complex_traits	1
connectivity	1
contingent_evolution	1
cost_of_complexity	1
cpg_island	1
critical_thinking	1
crosslinking	1
ctenophora	1
cytokine	1
data	1
dauer	1
ddc	1
democracy	1
de-speciation	1
developmental_bias	1
developmental_reprogramming	1
diabetes	1
digestion	1
directional_selection	1
distance_matrix	1
diversification_rapid	1
dna	1
dollos_law	1
ecdysozoa	1
editorial	1
education	1
effect_size	1
egg_yolk	1
empirical	1
encode	1
endomesoderm	1
endoplasmic_reticulum	1
environmental_niche	1
estrogen	1
eusociality	1
evolutionary_biology	1
exaptation	1
extracellular_matrix	1
eye	1
facilitated	1
faculative_asexuality	1
false_discovery_rate	1
fault_tolerance	1
flux_balance	1
frequency	1
gap_gene	1
gender_differences	1
gene_conversion	1
gene_fusion	1
gene_order	1
gene-phenotype_map	1
genetic_code	1
genetic_meltdown	1
genetic_penetrance	1
genital_defect	1
genome_rearrangements	1
genome_size	1
genomic_imprinting	1
gfp	1
glucose	1
gnathostome	1
graceful_degradation	1
gratuitous_reference	1
gravity	1
growth_factor	1
haploinsufficiency	1
hearing	1
heterotopy	1
hgt	1
histone_acetylation	1
histone_methylation	1
hitch-hiking	1
homeostasis	1
homology	1
homoplazsy	1
hox_genes	1
hsp70	1
hsp90	1
hydrophobic_patch	1
ichthyostega	1
inbreeding	1
incongruence	1
inference	1
information_theory	1
inheritance	1
inparalog	1
inparanoid	1
insect	1
insertion_site_bias	1
interaction_network	1
interaction_site	1
interferon	1
internal_fertilization	1
internal_selection	1
intron_gain	1
intron_loss	1
inverted_repeats	1
isoform	1
jaw	1
journal	1
kegg	1
kinase_tyrosine_receptor	1
kin_selection	1
lactation	1
lamprey	1
learning	1
limb	1
line_long_interspersed_element	1
lung	1
macrophage	1
marsupial	1
maternal_effect	1
mcat	1
meiosis	1
melanin	1
memory	1
metric	1
microrna	1
mistranslation	1
mol	1
monogamy	1
moult	1
mutation_accumulation	1
mutation_small_effect	1
mutualism	1

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