bjorns's library 274 articles Export

	Dissecting the bacterial type VI secretion system by a genome wide in silico analysis: what can be learnt from available microbial genomic resources? [My Copy] BMC Genomics, Vol. 10, No. 1. (2009) by Frederic Boyer, Gwennaele Fichant, Jeremie Berthod, Yves Vandenbrouck, Ina Attree posted to typeiv by bjorns on 2009-05-09 14:38:50 as along with 1 person neils
	Gene Conversion Maintains Nonfunctional Transposable Elements in an Obligate Mutualistic Endosymbiont [My Copy] Mol Biol Evol, Vol. 26, No. 8. (1 August 2009), pp. 1679-1682. by Richard Cordaux posted to geneconversion by bjorns on 2009-05-09 14:34:46 as along with 1 person operon
	Structure of the head of the Bartonella adhesin BadA. [My Copy] PLoS pathogens, Vol. 4, No. 8. (2008) by P. Szczesny, D. Linke, A. Ursinus, et al.K. Bär, H. Schwarz, T. M. Riess, V. A. Kempf, A. N. Lupas, J. Martin, K. Zeth posted to autotransporter bada bartonella by bjorns on 2008-11-24 15:05:24 as
	Visualization of pseudogenes in intracellular bacteria reveals the different tracks to gene destruction [My Copy] Genome Biology, Vol. 9 (26 February 2008), R42. by Hans-Henrik Fuxelius, Alistair C. Darby, Nam-Huyk Cho, Siv G. E. Andersson posted to molev by bjorns on 2008-09-01 12:00:23 as along with 4 people johanviklund treangen druvus operon
	Adhesion mediated by autotransporters of Gram-negative bacteria: Structural and functional features [My Copy] Research in Microbiology, Vol. 157, No. 5. (June 2006), pp. 407-416. by Victoria Girard, Michael Mourez posted to autotransporter review by bjorns on 2008-03-18 13:35:32 as
	Protein Secretion in Gram-Negative Bacteria via the Autotransporter Pathway [My Copy] Annual Review of Microbiology, Vol. 61, No. 1. (2007), pp. 89-112. by Nathalie Dautin, Harris D. Bernstein posted to autotransporter by bjorns on 2008-03-18 13:32:27 as
	Characterization of an Immunogenic Outer Membrane Autotransporter Protein, Arp, of Bartonella henselae [My Copy] Infect. Immun., Vol. 75, No. 11. (1 November 2007), pp. 5255-5263. by Christine M. Litwin, Mindy L. Rawlins, Erica M. Swenson posted to autotransporter by bjorns on 2008-03-18 13:27:37 as
	Gene conversion and concerted evolution in bacterial genomes. [My Copy] FEMS Microbiol Rev, Vol. 29, No. 2. (April 2005), pp. 169-183. by G. Santoyo, D. Romero posted to geneconversion by bjorns on 2007-07-18 11:54:32 as along with 2 people cambray treangen
	Role of Agrobacterium VirB11 ATPase in T-pilus assembly and substrate selection. [My Copy] J Bacteriol, Vol. 183, No. 20. (October 2001), pp. 5813-5825. by E. Sagulenko, V. Sagulenko, J. Chen, P. J. Christie posted to typeiv by bjorns on 2007-07-06 15:11:28 as
	Type III pilus of corynebacteria: Pilus length is determined by the level of its major pilin subunit. [My Copy] J Bacteriol, Vol. 188, No. 17. (September 2006), pp. 6318-6325. by A. Swierczynski, H. Ton-That posted to typeiii by bjorns on 2007-07-05 09:12:55 as along with 1 person srfairclough
	Bacterial antigenic variation, host immune response, and pathogen-host coevolution. [My Copy] Infect Immun, Vol. 61, No. 6. (June 1993), pp. 2273-2276. by R. C. Brunham, F. A. Plummer, R. S. Stephens posted to recombination review surface by bjorns on 2007-06-29 10:54:18 as along with 2 people VGreiff tomhebbron
	Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. [My Copy] Genetics, Vol. 123, No. 3. (November 1989), pp. 585-595. by F. Tajima posted to theory by bjorns on 2007-06-29 10:14:08 as along with 3 people renewang bpb pradiptaray
	Role of selection in fixation of gene duplications. [My Copy] J Theor Biol, Vol. 239, No. 2. (21 March 2006), pp. 141-151. by F. A. Kondrashov, A. S. Kondrashov posted to duplications by bjorns on 2007-06-29 08:33:41 as along with 2 people treangen bpcusack
	Evolution after gene duplication: models, mechanisms, sequences, systems, and organisms. [My Copy] J Exp Zoolog B Mol Dev Evol (12 July 2006) by Christian Roth, Shruti Rastogi, Lars Arvestad, et al.Katharina Dittmar, Sara Light, Diana Ekman, David A A. Liberles posted to duplications by bjorns on 2007-06-29 08:21:57 as along with 9 people jameswasmuth wangbo azazello zhlei operon treangen signalduplication LouisKa smbe2008
	Highly efficient concerted evolution in the ribosomal DNA repeats: total rDNA repeat variation revealed by whole-genome shotgun sequence data. [My Copy] Genome Res, Vol. 17, No. 2. (February 2007), pp. 184-191. by A. R. Ganley, T. Kobayashi posted to geneconversion by bjorns on 2007-06-29 08:11:02 as along with 3 people druvus dandaman dmc
	Structure, function, and evolution of transient and obligate protein-protein interactions. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 31. (2 August 2005), pp. 10930-10935. by Julian Mintseris, Zhiping Weng posted to networks rate by bjorns on 2007-06-28 16:18:14 as along with 11 people and 3 groups timg mgomes barry wiehe julianm bicko chad_davis cjeans Evangelia marti higueruelo structural_bioinformatics ZLAB Bioinformatics
	Specificity in protein interactions and its relationship with sequence diversity and coevolution [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 19. (8 May 2007), pp. 7999-8004. by Luke Hakes, Simon C. Lovell, Stephen G. Oliver, David L. Robertson posted to networks rate by bjorns on 2007-06-28 15:53:02 as along with 14 people and 2 groups mgomes chica diamantis dullhunk marti stevanspringer cjeans zwang Garamonfok cursonivel1 tale winterschlaefer phoenixzxl chrys FAB-lab cursonivel1
	Cutting edge: antibody-mediated cessation of hemotropic infection by the intraerythrocytic mouse pathogen Bartonella grahamii. [My Copy] J Immunol, Vol. 167, No. 1. (1 July 2001), pp. 11-14. by J. Koesling, T. Aebischer, C. Falch, R. Schülein, C. Dehio posted to bartonella by bjorns on 2007-06-28 12:53:49 as
	A malaria invasion receptor, the 175-kilodalton erythrocyte binding antigen of Plasmodium falciparum recognizes the terminal Neu5Ac(alpha 2-3)Gal- sequences of glycophorin A. [My Copy] J Cell Biol, Vol. 116, No. 4. (February 1992), pp. 901-909. by P. A. Orlandi, F. W. Klotz, J. D. Haynes posted to erythrocytes by bjorns on 2007-06-28 11:26:04 as along with 1 person haiiroguma
	System-wide genomic and biochemical comparisons of sialic acid biology among primates and rodents: Evidence for two modes of rapid evolution. [My Copy] J Biol Chem, Vol. 281, No. 35. (1 September 2006), pp. 25689-25702. by T. K. Altheide, T. Hayakawa, T. S. Mikkelsen, S. Diaz, N. Varki, A. Varki posted to erythrocytes by bjorns on 2007-06-28 10:10:13 as
	Transposition of structural genes to an expression sequence on a linear plasmid causes antigenic variation in the bacterium Borrelia hermsii. [My Copy] Nature, Vol. 318, No. 6043. (7 1985), pp. 257-263. by R. H. Plasterk, M. I. Simon, A. G. Barbour posted to geneconversion by bjorns on 2007-06-26 19:31:46 as
	Selection for more of the same product as a force to enhance concerted evolution of duplicated genes. [My Copy] Trends in genetics : TIG, Vol. 22, No. 12. (December 2006), pp. 642-644. by R. P. Sugino, H. Innan posted to duplications by bjorns on 2007-06-26 16:50:19 as along with 3 people and 2 groups sameersoi azazello dchughes G4ID Genetics-of-Gambling
	The (in)dependence of alternative splicing and gene duplication. [My Copy] PLoS Comput Biol, Vol. 3, No. 3. (2 March 2007) by D. Talavera, C. Vogel, M. Orozco, S. A. Teichmann, X. de la Cruz posted to duplications by bjorns on 2007-06-26 16:46:23 as
	Antigen polymorphism in Borrelia hermsii, a clonal pathogenic bacterium. [My Copy] Proc Natl Acad Sci U S A, Vol. 98, No. 26. (18 December 2001), pp. 15038-15043. by S. M. Rich, S. A. Sawyer, A. G. Barbour posted to recombination by bjorns on 2007-06-18 10:14:52 as
	Effects of cow age and pregnancy on Bartonella infection in a herd of dairy cattle. [My Copy] J Clin Microbiol, Vol. 44, No. 1. (January 2006), pp. 42-46. by R. Maillard, B. Grimard, S. Chastant-Maillard, et al.B. Chomel, T. Delcroix, C. Gandoin, C. Bouillin, L. Halos, M. Vayssier-Taussat, H. J. Boulouis posted to bovis by bjorns on 2007-06-07 10:13:27 as
	Bartonella bovis Bermond et al. sp. nov. and Bartonella capreoli sp. nov., isolated from European ruminants. [My Copy] Int J Syst Evol Microbiol, Vol. 52, No. Pt 2. (March 2002), pp. 383-390. by D. Bermond, H. J. Boulouis, R. Heller, et al.G. Van Laere, H. Monteil, B. B. Chomel, A. Sander, C. Dehio, Y. Piémont posted to bovis by bjorns on 2007-06-07 10:09:04 as
	Type V Protein Secretion Pathway: the Autotransporter Story [My Copy] Microbiol. Mol. Biol. Rev., Vol. 68, No. 4. (1 December 2004), pp. 692-744. by Ian R. Henderson, Fernando Navarro-Garcia, Mickael Desvaux, Rachel C. Fernandez, Dlawer Ala'aldeen posted to typev by bjorns on 2007-06-07 10:01:22 as along with 2 people balajis pansapiens
	Genome sequencing in microfabricated high-density picolitre reactors. [My Copy] Nature, Vol. 437, No. 7057. (15 September 2005), pp. 376-380. by Marcel Margulies, Michael Egholm, William E. Altman, et al.Said Attiya, Joel S. Bader, Lisa A. Bemben, Jan Berka, Michael S. Braverman, Yi-Ju J. Chen, Zhoutao Chen, Scott B. Dewell, Lei Du, Joseph M. Fierro, Xavier V. Gomes, Brian C. Godwin, Wen He, Scott Helgesen, Chun Heen H. Ho, Chun He H. Ho, Gerard P. Irzyk, Szilveszter C. Jando, Maria L. Alenquer, Thomas P. Jarvie, Kshama B. Jirage, Jong-Bum B. Kim, James R. Knight, Janna R. Lanza, John H. Leamon, Steven M. Lefkowitz, Ming Lei, Jing Li, Kenton L. Lohman, Hong Lu, Vinod B. Makhijani, Keith E. McDade, Michael P. McKenna, Eugene W. Myers, Elizabeth Nickerson, John R. Nobile, Ramona Plant, Bernard P. Puc, Michael T. Ronan, George T. Roth, Gary J. Sarkis, Jan Fredrik F. Simons, John W. Simpson, Maithreyan Srinivasan, Karrie R. Tartaro, Alexander Tomasz, Kari A. Vogt, Greg A. Volkmer, Shally H. Wang, Yong Wang, Michael P. Weiner, Pengguang Yu, Richard F. Begley, Jonathan M. Rothberg posted to 454 by bjorns on 2007-06-07 09:57:51 as along with 37 people and 5 groups rshe seb1 pachorip katiehumphry jonilaserson michaelbarton sandfire natstreet daforerog idoerg mmartin azazello jbhiatt alessandrobrozzi leechuck dayjm jmeppley arve RMGraze JAShapiro balajis cdawson AaronDarling treangen usagi-kirin beatrizfernandez wenhan xingxu erbon tpreeprem farhat carpi bpb mcox GustavoLacerda jlgreen kieran101 Microbial-Ecology GIG gatech-compgenomics Green Lab iSEEM
	Type III secretion systems and bacterial flagella: insights into their function from structural similarities. [My Copy] Proc Natl Acad Sci U S A, Vol. 100, No. 6. (18 March 2003), pp. 3027-3030. by A. Blocker, K. Komoriya, S. Aizawa posted to flagella typeiii by bjorns on 2007-06-07 09:55:12 as along with 3 people balajis choonpeng cam-flagella
	Bacterial flagellar diversity in the post-genomic era. [My Copy] Trends Microbiol, Vol. 13, No. 4. (April 2005), pp. 143-149. by M. J. Pallen, C. W. Penn, R. R. Chaudhuri posted to flagella by bjorns on 2007-06-07 09:52:59 as
	Receptor and ligand domains for invasion of erythrocytes by Plasmodium falciparum. [My Copy] Science, Vol. 264, No. 5167. (24 June 1994), pp. 1941-1944. by B. K. Sim, C. E. Chitnis, K. Wasniowska, T. J. Hadley, L. H. Miller posted to erythrocytes by bjorns on 2007-06-05 07:19:01 as
	Evolutionary considerations in relating oligosaccharide diversity to biological function. [My Copy] Glycobiology, Vol. 9, No. 8. (August 1999), pp. 747-755. by P. Gagneux, A. Varki posted to erythrocytes by bjorns on 2007-06-05 07:16:30 as
	Evidence for diversifying selection on erythrocyte-binding antigens of Plasmodium falciparum and P. vivax. [My Copy] Genetics, Vol. 163, No. 4. (April 2003), pp. 1327-1336. by J. Baum, A. W. Thomas, D. J. Conway posted to diversifying erythrocytes by bjorns on 2007-06-03 16:28:21 as
	Natural selection on the erythrocyte surface. [My Copy] Mol Biol Evol, Vol. 19, No. 3. (March 2002), pp. 223-229. by J. Baum, R. H. Ward, D. J. Conway posted to diversifying erythrocytes by bjorns on 2007-06-03 16:28:00 as along with 1 person tomhebbron
	The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse. [My Copy] Proc Natl Acad Sci U S A, Vol. 103, No. 42. (17 October 2006), pp. 15582-15587. by M. P. McLeod, R. L. Warren, W. W. Hsiao, et al.N. Araki, M. Myhre, C. Fernandes, D. Miyazawa, W. Wong, A. L. Lillquist, D. Wang, M. Dosanjh, H. Hara, A. Petrescu, R. D. Morin, G. Yang, J. M. Stott, J. E. Schein, H. Shin, D. Smailus, A. S. Siddiqui, M. A. Marra, S. J. Jones, R. Holt, F. S. Brinkman, K. Miyauchi, M. Fukuda, J. E. Davies, W. W. Mohn, L. D. Eltis posted to duplications genome by bjorns on 2007-06-03 14:42:15 as along with 1 person treangen
	Evolution of sensory complexity recorded in a myxobacterial genome [My Copy] PNAS, Vol. 103, No. 41. (10 October 2006), pp. 15200-15205. by B. S. Goldman, W. C. Nierman, D. Kaiser, et al.S. C. Slater, A. S. Durkin, J. A. Eisen, C. M. Ronning, W. B. Barbazuk, M. Blanchard, C. Field, C. Halling, G. Hinkle, O. Iartchuk, H. S. Kim, C. Mackenzie, R. Madupu, N. Miller, A. Shvartsbeyn, S. A. Sullivan, M. Vaudin, R. Wiegand, H. B. Kaplan posted to duplications by bjorns on 2007-06-03 14:32:14 as along with 3 people treangen stajich blobbybirdman
	Gene duplication and biased functional retention of paralogs in bacterial genomes. [My Copy] Trends Microbiol, Vol. 12, No. 4. (April 2004), pp. 148-154. by D. Gevers, K. Vandepoele, C. Simillon, Y. Van de Peer posted to duplications by bjorns on 2007-06-03 14:30:00 as
	The Orientia tsutsugamushi genome reveals massive proliferation of conjugative type IV secretion system and host-cell interaction genes. [My Copy] Proc Natl Acad Sci U S A, Vol. 104, No. 19. (8 May 2007), pp. 7981-7986. by N. H. Cho, H. R. Kim, J. H. Lee, et al.S. Y. Kim, J. Kim, S. Cha, S. Y. Kim, A. C. Darby, H. H. Fuxelius, J. Yin, J. H. Kim, J. Kim, S. J. Lee, Y. S. Koh, W. J. Jang, K. H. Park, S. G. Andersson, M. S. Choi, I. S. Kim posted to geneconversion molev repeats by bjorns on 2007-06-03 14:12:48 as along with 3 people uedakina operon treangen
	Gene conversion drives within genic sequences: concerted evolution of ribosomal RNA genes in bacteria and archaea. [My Copy] J Mol Evol, Vol. 51, No. 4. (October 2000), pp. 305-317. by D. Liao posted to geneconversion by bjorns on 2007-06-03 13:59:58 as
	Type II protein secretion and its relationship to bacterial type IV pili and archaeal flagella. [My Copy] Microbiology, Vol. 149, No. Pt 11. (November 2003), pp. 3051-3072. by C. R. Peabody, Y. J. Chung, M. R. Yen, D. Vidal-Ingigliardi, A. P. Pugsley, M. H. Saier posted to typeii by bjorns on 2007-06-03 11:44:16 as
	Terminal reassortment drives the quantum evolution of type III effectors in bacterial pathogens. [My Copy] PLoS Pathog, Vol. 2, No. 10. (October 2006) by J. Stavrinides, W. Ma, D. S. Guttman posted to typeiii by bjorns on 2007-05-30 06:44:36 as
	Molecular evolution of the tprC, D, I, K, G, and J genes in the pathogenic genus Treponema. [My Copy] Mol Biol Evol, Vol. 23, No. 11. (November 2006), pp. 2220-2233. by R. R. Gray, C. J. Mulligan, B. J. Molini, et al.E. S. Sun, L. Giacani, C. Godornes, A. Kitchen, S. A. Lukehart, A. Centurion-Lara posted to duplications geneconversion by bjorns on 2007-05-28 09:46:28 as
	Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography [My Copy] Genome Res., Vol. 17, No. 1. (1 January 2007), pp. 7-15. by Philippe Normand, Pascal Lapierre, Louis S. Tisa, et al.Johann P. Gogarten, Nicole Alloisio, Emilie Bagnarol, Carla A. Bassi, Alison M. Berry, Derek M. Bickhart, Nathalie Choisne, Arnaud Couloux, Benoit Cournoyer, Stephane Cruveiller, Vincent Daubin, Nadia Demange, Maria P. Francino, Eugene Goltsman, Ying Huang, Olga R. Kopp, Laurent Labarre, Alla Lapidus, Celine Lavire, Joelle Marechal, Michele Martinez, Juliana E. Mastronunzio, Beth C. Mullin, James Niemann, Pierre Pujic, Tania Rawnsley, Zoe Rouy, Chantal Schenowitz, Anita Sellstedt, Fernando Tavares, Jeffrey P. Tomkins, David Vallenet, Claudio Valverde, Luis G. Wall, Ying Wang, Claudine Medigue, David R. Benson posted to duplications by bjorns on 2007-05-28 09:36:17 as along with 1 person operon
	Multiple Gene Duplication and Rapid Evolution in the groEL Gene: Functional Implications [My Copy] Journal of Molecular Evolution, Vol. 63, No. 6. (December 2006), pp. 781-787. by Goyal, Kshama, Qamra, Rohini, Mande, C. Shekhar posted to duplications by bjorns on 2007-05-28 09:32:52 as
	Genome analyses of three strains of Rhodobacter sphaeroides: evidence of rapid evolution of chromosome II. [My Copy] J Bacteriol, Vol. 189, No. 5. (March 2007), pp. 1914-1921. by M. Choudhary, X. Zanhua, Y. X. Fu, S. Kaplan posted to duplications genome strain by bjorns on 2007-05-28 09:29:23 as along with 1 person operon
	Emulating membrane protein evolution by rational design. [My Copy] Science, Vol. 315, No. 5816. (2 March 2007), pp. 1282-1284. by M. Rapp, S. Seppälä, E. Granseth, G. von Heijne posted to duplications by bjorns on 2007-05-28 09:25:01 as along with 4 people hc5428 grahamc martainn viktor21614
	Insights into the evolutionary history of tubercle bacilli as disclosed by genetic rearrangements within a PE_PGRS duplicated gene pair [My Copy] BMC Evolutionary Biology, Vol. 6 (12 December 2006), 107. by Anis Karboul, Nicolaas, Amine Namouchi, et al.Veronique Vincent, Christophe Sola, Nalin Rastogi, Philip Suffys, Michel Fabre, Angel Cataldi, Richard C. Huard, Natalia Kurepina, Barry Kreiswirth, John L. Ho, Cristina M. Gutierrez, Helmi Mardassi posted to duplications repeats by bjorns on 2007-05-28 09:22:01 as
	Comparison of partial citrate synthase gene (gltA) sequences for phylogenetic analysis of Bartonella species. [My Copy] Int J Syst Bacteriol, Vol. 46, No. 4. (October 1996), pp. 891-897. by R. J. Birtles, D. Raoult posted to bartonella phylogeny by bjorns on 2007-03-28 08:10:23 as
	Phylogenetic classification of Bartonella species by comparing groEL sequences. [My Copy] Int J Syst Evol Microbiol, Vol. 52, No. Pt 1. (January 2002), pp. 165-171. by Z. Zeaiter, P. E. Fournier, H. Ogata, D. Raoult posted to bartonella phylogeny by bjorns on 2007-03-28 08:03:11 as
	Study of genotypes and virB4 secretion gene of Bartonella henselae strains from patients with clinically defined cat scratch disease. [My Copy] J Clin Microbiol, Vol. 42, No. 4. (April 2004), pp. 1420-1427. by S. Woestyn, N. Olivé, G. Bigaignon, V. Avesani, M. Delmée posted to bartonella strain by bjorns on 2007-03-28 07:55:56 as

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refs_jme05	84
kaks	24
expression	23
typeiv	19
helicobacter	18
networks	17
alpha	16
review	14
duplications	13
typeiii	13
bartonella	12
genome	12
recombination	12
molev	11
rocha	10
codon	9
essentialgenes	9
strain	9
ecoli	8
egs	7
geneconversion	7
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rate	7
sino	7
theory	7
yeast	7
erythrocytes	6
phylogeny	6
az	5
jc	5
pseudo	5
repeats	5
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endosymbiotic	4
my	4
simulation	4
adaptive	3
duplication	3
fast	3
pkpd	3
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4sis	2
bovis	2
buchnera	2
diversifying	2
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lgt	2
metabolic	2
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trw	2
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gamma	1
gene_content	1
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lic	1
mito	1
mrna	1
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opinion	1
preview	1
promoter	1
puf	1
reduction	1
ringoflife	1
salmonella	1
sar11	1
system	1
transporter	1
typev	1

bjorns's library 274 articles Export

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