bootsy's network [31 articles] Export

Recent papers added to bootsy's library classified by the tag network. You can also see everyone's network.

	Navigating networks by using homophily and degree [My Copy] Proceedings of the National Academy of Sciences (2008) by Özgür Şimşek, Jensen posted to bootsy network by bootsy on 2008-09-01 08:56:11 as along with 3 people guhjy cmmorel dakelley
	Survival of the sparsest: robust gene networks are parsimonious [My Copy] Mol Syst Biol, Vol. 4 (2008) by Robert D. Leclerc posted to network robustness systems_biology by bootsy on 2008-08-13 08:32:55 as along with 8 people and 1 group mjoach josedavid sg45653 Borelli Retchless maralena bpcusack reyez GEB
	Coherent Coupling of Feedback Loops: A Design Principle of Cell Signaling Networks. [My Copy] Bioinformatics (Oxford, England) (2 July 2008) by Yung-Keun K. Kwon, Kwang-Hyun H. Cho posted to feedback_loop network signaling by bootsy on 2008-07-06 07:29:22 as along with 4 people maralena jjray lemke reyez
	A computational analysis of protein-protein interaction networks in neurodegenerative diseases. [My Copy] BMC systems biology, Vol. 2, No. 1. (2008) by Joaquín Goñi, Francisco J. Esteban, Nieves Vélez V. de Mendizábal, et al.Jorge Sepulcre, Sergio Ardanza-Trevijano, Ion Agirrezabal, Pablo Villoslada posted to analysis disease network ppi by bootsy on 2008-06-20 14:44:44 as along with 4 people minostro renatomilani reyez AbnerCYH
	NeAT: a toolbox for the analysis of biological networks, clusters, classes and pathways. [My Copy] Nucleic acids research, Vol. 36, No. Web Server issue. (1 July 2008) by S. Brohée, K. Faust, G. Lima-Mendez, et al.O. Sand, R. Janky, G. Vanderstocken, Y. Deville, J. van Helden posted to analysis network pathway tool by bootsy on 2008-06-07 22:48:22 as along with 7 people carlk ptrobajo natstreet druvus jfr Borelli guhjy
	Principles of microRNA regulation of a human cellular signaling network. [My Copy] Molecular systems biology, Vol. 2 (2006) by Qinghua Cui, Zhenbao Yu, Enrico O. Purisima, Edwin Wang posted to human microrna network regulation signaling by bootsy on 2008-05-21 09:58:24 as along with 9 people and 4 groups epinatel daforerog okarsligil jfr marcius tardigrade mtagaya ealloza maralena cube_and_beyond Bioinformatics BioinfoCIPF SGU-CIPF
	The guardian's little helper: microRNAs in the p53 tumor suppressor network. [My Copy] Cancer research, Vol. 67, No. 23. (1 December 2007), pp. 11099-11101. by Xingyue He, Lin He, Gregory J. Hannon posted to microrna network p53 by bootsy on 2008-05-16 15:21:34 as along with 4 people guhjy danaiancu valeriehilgers jfr
	Network-based global inference of human disease genes. [My Copy] Molecular systems biology, Vol. 4 (6 May 2008) by X. Wu, R. Jiang, M. Q. Zhang, S. Li posted to disease genotype human network phenotype by bootsy on 2008-05-13 08:23:38 as along with 13 people carlk daforerog ilyashl saket tmmurali diamantis jfr maralena biomcgary guhjy zwang ptrobajo Borelli
	VisANT: an integrative framework for networks in systems biology [My Copy] Brief Bioinform (7 May 2008), bbn020. by Zhenjun Hu, Evan S. Snitkin, Charles Delisi posted to network systems_biology tool by bootsy on 2008-05-13 08:16:24 as along with 8 people and 1 group Scis0000002 druvus jfr sameetmehta maralena guhjy maoxizeng srp33 Bioinformatics
	SBMLsqueezer: A CellDesigner plug-in to generate kinetic rate equations for biochemical networks [My Copy] BMC Systems Biology, Vol. 2, No. 1. (2008), 39. by Andreas Drager, Nadine Hassis, Jochen Supper, Adrian Schroder, Andreas Zell posted to network s sbml systems_biology by bootsy on 2008-05-05 08:35:25 as along with 2 people schwartzjmc guhjy
	Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Yuji Zhang, Jianhua Xuan, Benildo, Robert Clarke, Habtom Ressom posted to multi-source network transcription_factor by bootsy on 2008-04-28 08:44:56 as along with 7 people natstreet druvus heliopais dquest kengg bertelsen guhjy
	A global pathway crosstalk network. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 12. (15 June 2008), pp. 1442-1447. by Y. Li, P. Agarwal, D. Rajagopalan posted to crosstalk interaction network pathway by bootsy on 2008-04-28 08:40:23 as along with 8 people daforerog dragonrez thomaskelder maralena renatomilani AlexanderPico guhjy balicea
	Fast grid layout algorithm for biological networks with sweep calculation. [My Copy] Bioinformatics (Oxford, England) (18 April 2008) by Kaname Kojima, Masao Nagasaki, Satoru Miyano posted to layout network visualization systems_biology by bootsy on 2008-04-23 08:03:54 as along with 1 person guhjy
	Predicting co-complexed protein pairs from heterogeneous data. [My Copy] PLoS computational biology, Vol. 4, No. 4. (April 2008) by J. Qiu, W. S. Noble posted to interaction network prediction protein protein_complexes by bootsy on 2008-04-21 09:53:34 as along with 5 people guhjy roys carlk mingzhi penpen926
	Protein networks in disease. [My Copy] Genome research, Vol. 18, No. 4. (1 April 2008), pp. 644-652. by Trey Ideker, Roded Sharan posted to disease network protein by bootsy on 2008-04-18 08:37:00 as along with 27 people shikin carlk isimpson chica saket zufar kaarsinogen giovenko guhjy balicea tmmurali Borelli jwdietrich frohike nedwards roys mclarenv phoenixzxl brianb schuylrp jfr paolomarcatili gracio thomaskelder ptrobajo raiyar zwang
	A system for generating transcription regulatory networks with combinatorial control of transcription. [My Copy] Bioinformatics (Oxford, England) (8 April 2008) by Sushmita Roy, Margaret Werner-Washburne, Terran Lane posted to network transcription_factor systems_biology by bootsy on 2008-04-14 09:22:48 as along with 3 people kaarsinogen roys guhjy
	Transposable elements and the evolution of regulatory networks [My Copy] Nat Rev Genet, Vol. 9, No. 5. (27 May 2008), pp. 397-405. by Cedric Feschotte posted to evolution network regulation transposable_elements by bootsy on 2008-03-31 09:20:40 as along with 12 people and 1 group robfsouza fhalbrit balicea gwallau djkt idonaldson cmzmasek smbe2008 eskay roys pradiptaray timflutre BergmanLab
	The role of disorder in interaction networks: a structural analysis [My Copy] Molecular Systems Biology, Vol. 4 (25 March 2008) by Philip M. Kim, Andrea Sboner, Yu Xia, Mark Gerstein posted to interaction network structure by bootsy on 2008-03-31 09:07:31 as along with 7 people mgomes pablocarb zwang biomcgary maralena phoenixzxl chad_davis
	Quantitative analysis of robustness and fragility in biological networks based on feedback dynamics [My Copy] Bioinformatics, Vol. 24, No. 7. (1 April 2008), pp. 987-994. by Yung-Keun Kwon, Kwang-Hyun Cho posted to network pathway robustness systems_biology by bootsy on 2008-02-22 08:21:03 as along with 4 people abhishek_tiwari guhjy grahamc shigepong
	Predicting synthetic rescues in metabolic networks [My Copy] Mol Syst Biol, Vol. 4 (12 February 2008) by Adilson E. Motter, Natali Gulbahce, Eivind Almaas, Albert-Laszlo Barabasi posted to network prediction systems_biology by bootsy on 2008-02-17 09:45:31 as along with 10 people lflorez kentsis zwang biomcgary cabbagezs westoll shikin shung debasis tmmurali
	Petri net-based method for the analysis of the dynamics of signal propagation in signaling pathways [My Copy] Bioinformatics, Vol. 24, No. 2. (15 January 2008), pp. 209-217. by Simon Hardy, Pierre N. Robillard posted to network pathway systems_biology by bootsy on 2008-01-16 08:03:52 as along with 4 people kabookie guhjy biehl mailund
	CADLIVE for constructing a large-scale biochemical network based on a simulation-directed notation and its application to yeast cell cycle. [My Copy] Nucleic Acids Res, Vol. 31, No. 14. (15 July 2003), pp. 4071-4084. by H. Kurata, N. Matoba, N. Shimizu posted to network notation visualization yeast systems_biology by bootsy on 2008-01-04 12:35:31 as
	STITCH: interaction networks of chemicals and proteins [My Copy] Nucl. Acids Res., Vol. 36, No. suppl_1. (11 January 2008), pp. D684-688. by Michael Kuhn, Christian von Mering, Monica Campillos, Lars J. Jensen, Peer Bork posted to network protein resource by bootsy on 2007-12-19 09:01:32 as along with 9 people and 1 group medic0747 mitko Cortel guhjy balicea massivemayhem sobolevnrm larsjuhljensen higueruelo baker-group
	Distribution of node characteristics in complex networks. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 46. (13 November 2007), pp. 17916-17920. by J. Park, A. L. Barabási posted to network by bootsy on 2007-11-10 17:13:29 as along with 8 people daforerog davidecellai tmmurali cjeans roys nolodie JozefK Torsten_Holmer
	Genomic analysis of the hierarchical structure of regulatory networks [My Copy] Proceedings of the National Academy of Sciences, Vol. 103, No. 40. (3 October 2006), pp. 14724-14731. by Haiyuan Yu, Mark Gerstein posted to network systems_biology by bootsy on 2007-11-08 12:02:31 as along with 6 people arjun_citeulike carlk jiny hplatero RobMills dquest
	Graph Sharpening plus Graph Integration: A Synergy that Improves Protein Functional Classification. [My Copy] Bioinformatics (31 October 2007) by Hyunjung Shin, Andreas Martin M. Lisewski, Olivier Lichtarge posted to network prediction protein semi_supervised functional by bootsy on 2007-11-07 07:25:36 as along with 2 people tmmurali Pao-Yang
	A probabilistic view of gene function. [My Copy] Nat Genet, Vol. 36, No. 6. (June 2004), pp. 559-564. by A. G. Fraser, E. M. Marcotte posted to network functional by bootsy on 2007-05-15 16:51:46 as along with 10 people and 1 group bertelsen snuppepuppan ziquje lfriedl opheliav wnpx samal grahamc massivemayhem vietanh0 kdl
	From protein networks to biological systems. [My Copy] FEBS Lett, Vol. 579, No. 8. (21 March 2005), pp. 1821-1827. by P. Uetz, R. L. Finley posted to network systems_biology by bootsy on 2007-04-28 14:56:35 as along with 3 people kuhn iris_2001 maralena
	Novel Approaches for Analyzing Biological Networks [My Copy] Journal of Combinatorial Optimization, Vol. 10, No. 1. (August 2005), pp. 23-39. by Balabhaskar Balasundaram, Sergiy Butenko, Svyatoslav Trukhanov posted to analysis network by bootsy on 2007-04-28 14:52:51 as
	Evolution, Interactions, and Biological Networks [My Copy] PLoS Biology, Vol. 5, No. 1. (1 January 2007), e11. by Joshua S. Weitz, Philip N. Benfey, Ned S. Wingreen posted to network by bootsy on 2007-04-28 14:52:04 as along with 17 people and 1 group Borelli wangbo anphony eldan aalibes cmmorel balajis wnpx cerkut jhatrimatri josepe timothee srfairclough hmk Ema bpcusack skumagai contact-id
	Function prediction and protein networks. [My Copy] Curr Opin Cell Biol, Vol. 15, No. 2. (April 2003), pp. 191-198. by M. A. Huynen, B. Snel, C. von Mering, P. Bork posted to network protein functional by bootsy on 2007-04-28 13:12:17 as along with 5 people and 1 group cerca lfriedl balajis lyongu carlk kdl

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microrna	109
microrna_regulation	44
systems_biology	43
regulation	41
functional	38
network	31
expression	28
prediction	24
transcription_factor	23
tool	22
nc_rna	18
protein	18
evolution	17
notch_pathway	17
cancer	16
pathway	16
bootsy	15
splicing	15
genomics	14
epigenetics	13
analysis	12
mouse	11
ontology	9
signaling	9
database	8
disease	8
drosophila	7
human	7
structure	7
genomic_context	6
post_transcriptional	6
robustness	6
software	6
somitogenesis	6
visualization	6
chromosomal_location	5
interaction	5
plants	5
qualitative_modeling	5
regulatory_network	5
semantic_web	5
stem_cell	5
alignment	4
annotation	4
bioinformatic	4
c_elegans	4
gene_set	4
machine_learning	4
mammalian	4
ppi	4
processing	4
quantitative_modeling	4
resource	4
tissue-specific	4
yeast	4
arabidopsis	3
molecular_clock	3
motifs	3
proteomic	3
sequence	3
ath	2
cell_differentiation	2
chromatin	2
conservation	2
dna	2
feedback_loop	2
microrna_cluster	2
neurodegeneration	2
neurospora	2
p53	2
petri_net	2
promoter	2
rna	2
roc	2
sbml	2
semi_supervised	2
statistics	2
adaptation	1
boolean_simulation	1
cell_proliferation	1
cis_regulatory_elements	1
classification	1
cog	1
crosstalk	1
data_managment	1
dna_modification	1
environment	1
functional_module	1
fungi	1
genotype	1
layout	1
literature_mining	1
molecular	1
multi-source	1
notation	1
ortholog_proteins	1
phenotype	1
protein_complexes	1
s	1
t	1
transcriptome	1
transposable_elements	1
wnt_pathway	1
zebrafish	1

bootsy's network [31 articles] Export

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