bpcusack's codon_usage [12 articles] Export

Recent papers added to bpcusack's library classified by the tag codon_usage. You can also see everyone's codon_usage.

	Selection for minimization of translational frameshifting errors as a factor in the evolution of codon usage. [My Copy] Nucleic acids research (10 September 2009), gkp712. by Yang Huang, Eugene V. Koonin, David J. Lipman, Teresa M. Przytycka posted to codon_usage by bpcusack on 2009-11-16 17:39:00 as along with 1 person codonusage
	Positive selection for unpreferred codon usage in eukaryotic genomes. [My Copy] BMC evolutionary biology, Vol. 7 (18 July 2007), 119. by Daniel E. Neafsey, James E. Galagan posted to codon_usage by bpcusack on 2009-09-28 10:46:32 as along with 3 people cazmantis GustavoLacerda Ema
	Evidence for a trade-off between translational efficiency and splicing regulation in determining synonymous codon usage in Drosophila melanogaster. [My Copy] Molecular biology and evolution, Vol. 24, No. 12. (December 2007), pp. 2755-2762. by Tobias Warnecke, Laurence D. Hurst posted to translation splicing codon_usage by bpcusack on 2009-09-28 10:41:11 as
	Background selection in single genes may explain patterns of codon bias. [My Copy] Genetics, Vol. 175, No. 3. (1 March 2007), pp. 1381-1393. by Laurence Loewe, Brian Charlesworth posted to codon_usage by bpcusack on 2009-09-28 10:34:28 as along with 4 people and 1 group codonusage operon dpollard stajich EisenLab
	Estimating Selection Intensity on Synonymous Codon Usage in a Nonequilibrium Population [My Copy] Genetics, Vol. 183, No. 2. (1 October 2009), pp. 651-662. by Kai Zeng, Brian Charlesworth posted to codon_usage by bpcusack on 2009-09-16 17:15:31 as along with 1 person codonusage
	Clustering of codons with rare cognate tRNAs in human genes suggests an extra level of expression regulation. [My Copy] PLoS genetics, Vol. 5, No. 7. (3 July 2009), e1000548. by Joanna L. Parmley, Martijn A. Huynen posted to codon_usage by bpcusack on 2009-07-06 19:30:24 as along with 4 people saunders danatcaret hrogers djkt
	Coding-sequence determinants of gene expression in Escherichia coli. [My Copy] Science (New York, N.Y.), Vol. 324, No. 5924. (10 April 2009), pp. 255-258. by Grzegorz Kudla, Andrew W. Murray, David Tollervey, Joshua B. Plotkin posted to codon_usage by bpcusack on 2009-05-25 10:28:47 as along with 34 people and 1 group pmalkus codonusage balabu yyfwuhan dbikard kinestetika samgj dswan emptyhb sameersoi dpsuslo8 anwazo Vincent_Rouilly kintoki erel10 michaelbarton fenghezi VGreiff ramanuja austin twatanab coela polivares rpatward lizbiogen jdbowes operon jasontsai absterga jbhiatt jjray kshundyak zwang friendpine BergmanLab
	Translationally optimal codons associate with structurally sensitive sites in proteins. [My Copy] Molecular biology and evolution, Vol. 26, No. 7. (6 July 2009), pp. 1571-1580. by Tong Zhou, Mason Weems, Claus O. Wilke posted to codon_usage stats translation by bpcusack on 2009-04-08 14:23:33 as along with 3 people and 1 group saunders paramitamandal djkt Journal picks
	Can codon usage bias explain intron phase distributions and exon symmetry? [My Copy] Journal of molecular evolution, Vol. 60, No. 1. (January 2005), pp. 99-104. by A. Ruvinsky, S. T. Eskesen, F. N. Eskesen, L. D. Hurst posted to codon_usage by bpcusack on 2008-09-18 16:31:20 as
	Virus Attenuation by Genome-Scale Changes in Codon Pair Bias [My Copy] Science, Vol. 320, No. 5884. (27 June 2008), pp. 1784-1787. by Robert J. Coleman, Dimitris Papamichail, Steven Skiena, Bruce Futcher, Eckard Wimmer, Steffen Mueller posted to codon_usage evol_med by bpcusack on 2008-09-08 10:10:48 as along with 6 people and 1 group memerman vphan wsjames tmmurali skumagai austin Oxford Virology
	Virology. 'Biased' viruses suggest new vaccine strategy for polio and other diseases. [My Copy] Science (New York, N.Y.), Vol. 320, No. 5884. (27 June 2008) by M. Enserink posted to codon_usage evol_med by bpcusack on 2008-09-08 10:10:36 as
	Genome Landscapes and Bacteriophage Codon Usage [My Copy] PLoS Comput Biol, Vol. 4, No. 2. (29 February 2008), e1000001. by Julius B. Lucks, David R. Nelson, Grzegorz R. Kudla, Joshua B. Plotkin posted to codon_usage by bpcusack on 2008-08-14 16:48:26 as along with 2 people coela codonusage

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duplication	57
adaptation	29
nmd	28
imprinting	22
stats	22
evol_med	20
robustness	18
speciation	18
nuts_n_bolts	16
methylation	15
retro	15
chromatin	14
cne	14
epigenetics	14
evolution	14
georgia	14
translation	14
codon_usage	12
ppi	12
protein	12
recomb	12
cited_by_chamary	11
microrna	11
exons_domains	10
mutation	10
phenotypic_mutn	10
evo_devo	9
alignment	8
alt_splice	8
chr_rearr	8
cnv	8
gene_loss	8
mothoin	8
replication	8
wiki	8
bgc	7
landscape	7
nogd	7
strand_asymm	7
dosage	6
epistasis	6
noise	6
subfunc	6
transcriptome	6
cpg	5
lynch_review	5
networks	5
promoter	5
remote_homology	5
complexity	4
dominance	4
dominant_negative	4
genome_organisn	4
ka_ks	4
molpunceqm	4
mutagenic_anomaly	4
phylogenetics	4
proteome	4
splicing	4
trim5a	4
adaptive_conflict	3
cis_regn	3
cited_by_oakey	3
duplicability	3
ese	3
figure	3
gc	3
genetic_draft	3
meiosis	3
promiscuity	3
protein_rna_structure	3
silent	3
sos	3
wtf	3
autosome_vs_xy	2
cgi	2
chaperones	2
convergence	2
directed_evoln	2
genetic_code	2
introns	2
neutral	2
paramutation	2
pos_selection	2
pufferfish	2
recip_sf	2
sodcp_rpl32	2
textmining	2
trna	2
chloroplast_genome	1
compaction	1
compensation	1
ddc	1
dmi	1
expression_level	1
gene_dosage	1
genotype_phenotype_map	1
heterohomodimers	1
heterosis	1
in_press	1
maths	1
mitochondrial_genome	1
nas	1
numt	1
phil_sci	1
phylo_fp	1
polymorph	1
pre_term	1
publicn	1
repair	1
simulation	1
style	1
tes	1

bpcusack's codon_usage [12 articles] Export

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