bpcusack's nmd [28 articles] Export

Recent papers added to bpcusack's library classified by the tag nmd. You can also see everyone's nmd.

	Genome-wide mapping of alternative splicing in Arabidopsis thaliana [My Copy] Genome Research (26 October 2009) by Sergei A. Filichkin, Henry D. Priest, Scott A. Givan, et al.Rongkun Shen, Douglas W. Bryant, Samuel E. Fox, Weng-Keen Wong, Todd C. Mockler posted to nmd by bpcusack on 2009-11-03 18:17:42 as along with 4 people cajunsushi kshameer GeeSharpMinor natstreet
	Genome-wide suppression of aberrant mRNA-like noncoding RNAs by NMD in Arabidopsis. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 7. (17 February 2009), pp. 2453-2458. by Yukio Kurihara, Akihiro Matsui, Kousuke Hanada, et al.Makiko Kawashima, Junko Ishida, Taeko Morosawa, Maho Tanaka, Eli Kaminuma, Yoshiki Mochizuki, Akihiro Matsushima, Tetsuro Toyoda, Kazuo Shinozaki, Motoaki Seki posted to nmd by bpcusack on 2009-11-03 18:05:47 as
	Inter-kingdom conservation of mechanism of nonsense-mediated mRNA decay. [My Copy] The EMBO journal, Vol. 27, No. 11. (4 June 2008), pp. 1585-1595. by Zoltán Kerényi, Zsuzsanna Mérai, László Hiripi, et al.Anna Benkovics, Péter Gyula, Christophe Lacomme, Endre Barta, Ferenc Nagy, Dániel Silhavy posted to nmd by bpcusack on 2009-10-05 17:46:10 as
	Nonsense-mediated mRNA decay effectors are essential for zebrafish embryonic development and survival. [My Copy] Molecular and cellular biology, Vol. 29, No. 13. (July 2009), pp. 3517-3528. by Nadine Wittkopp, Eric Huntzinger, Catrin Weiler, et al.Jérôme Saulière, Steffen Schmidt, Mahendra Sonawane, Elisa Izaurralde posted to nmd by bpcusack on 2009-10-05 17:45:51 as
	NMD is essential for hematopoietic stem and progenitor cells and for eliminating by-products of programmed DNA rearrangements. [My Copy] Genes & development, Vol. 22, No. 10. (15 May 2008), pp. 1381-1396. by Joachim Weischenfeldt, Inge Damgaard, David Bryder, et al.Kim Theilgaard-Mönch, Lina A. Thoren, Finn Cilius C. Nielsen, Sten Eirik E. Jacobsen, Claus Nerlov, Bo Torben T. Porse posted to nmd by bpcusack on 2009-10-05 17:45:32 as
	Exon-trapping mediated by the human retrotransposon SVA [My Copy] Genome Research, Vol. 19, No. 11. (27 November 2009), pp. 1983-1991. by Dustin C. Hancks, Adam D. Ewing, Jesse E. Chen, Katsushi Tokunaga, Haig H. Kazazian posted to retro nmd by bpcusack on 2009-10-01 16:41:46 as along with 1 person operon
	Co-translational mRNA decay in Saccharomyces cerevisiae. [My Copy] Nature, Vol. 461, No. 7261. (10 September 2009), pp. 225-229. by Wenqian Hu, Thomas J. Sweet, Sangpen Chamnongpol, Kristian E. Baker, Jeff Coller posted to translation nmd by bpcusack on 2009-09-03 19:13:11 as along with 4 people and 1 group biomcgary nzm jjray TRHvidsten Journal picks
	Noisy splicing, more than expression regulation, explains why some exons are subject to nonsense-mediated mRNA decay. [My Copy] BMC biology, Vol. 7 (14 May 2009), 23. by Zhenguo Zhang, Dedong Xin, Ping Wang, et al.Li Zhou, Landian Hu, Xiangyin Kong, Laurence D. Hurst posted to nmd by bpcusack on 2009-08-31 17:41:53 as
	How introns influence and enhance eukaryotic gene expression. [My Copy] Trends in biochemical sciences, Vol. 28, No. 4. (April 2003), pp. 215-220. by H. Le Hir, A. Nott, M. J. Moore posted to nmd by bpcusack on 2009-06-15 13:19:19 as
	Splicing enhances translation in mammalian cells: an additional function of the exon junction complex. [My Copy] Genes & development, Vol. 18, No. 2. (15 January 2004), pp. 210-222. by A. Nott, H. Le Hir, M. J. Moore posted to nmd by bpcusack on 2009-06-15 13:17:54 as
	EJCs at the heart of translational control. [My Copy] Cell, Vol. 133, No. 2. (18 April 2008), pp. 213-216. by H. Le Hir, B. Séraphin posted to nmd by bpcusack on 2009-06-15 13:15:26 as
	Widespread impact of nonsense-mediated mRNA decay on the yeast intronome. [My Copy] Molecular cell, Vol. 31, No. 3. (8 August 2008), pp. 360-370. by S. Sayani, M. Janis, C. Y. Lee, I. Toesca, G. F. Chanfreau posted to nmd by bpcusack on 2009-05-29 18:27:35 as
	Upstream open reading frames cause widespread reduction of protein expression and are polymorphic among humans [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 18. (5 May 2009), pp. 7507-7512. by Sarah E. Calvo, David J. Pagliarini, Vamsi K. Mootha posted to nmd by bpcusack on 2009-04-22 12:34:26 as along with 4 people daforerog psique fenghezi brianb
	Intron size, abundance, and distribution within untranslated regions of genes. [My Copy] Molecular biology and evolution, Vol. 23, No. 12. (December 2006), pp. 2392-2404. by X. Hong, D. G. Scofield, M. Lynch posted to nmd by bpcusack on 2009-03-10 18:38:52 as
	Position of the final intron in full-length transcripts: determined by NMD? [My Copy] Molecular biology and evolution, Vol. 24, No. 4. (April 2007), pp. 896-899. by D. G. Scofield, X. Hong, M. Lynch posted to nmd by bpcusack on 2009-03-10 18:35:56 as
	The multiple lives of NMD factors: balancing roles in gene and genome regulation [My Copy] Nat Rev Genet, Vol. 9, No. 9. (2008), pp. 699-712. by Olaf Isken, Lynne E. Maquat posted to nmd by bpcusack on 2008-08-22 09:10:13 as along with 2 people and 1 group dakelley stajich Mycology
	The human intronless melanocortin 4-receptor gene is NMD insensitive. [My Copy] Human molecular genetics, Vol. 11, No. 3. (1 February 2002), pp. 331-335. by K. S. Brocke, G. Neu-Yilik, N. H. Gehring, M. W. Hentze, A. E. Kulozik posted to nmd by bpcusack on 2008-08-05 10:53:37 as
	Sequences within the last intron function in RNA 3'-end formation in cultured cells. [My Copy] Molecular and cellular biology, Vol. 13, No. 6. (June 1993), pp. 3359-3369. by D. Nesic, J. Cheng, L. E. Maquat posted to nmd by bpcusack on 2008-08-05 10:36:56 as
	Mammalian heat shock p70 and histone H4 transcripts, which derive from naturally intronless genes, are immune to nonsense-mediated decay. [My Copy] RNA (New York, N.Y.), Vol. 7, No. 3. (March 2001), pp. 445-456. by L. E. Maquat, X. Li posted to nmd by bpcusack on 2008-08-05 10:34:44 as
	Negative selection pressure against premature protein truncation is reduced by alternative splicing and diploidy. [My Copy] Trends in genetics : TIG, Vol. 20, No. 10. (October 2004), pp. 472-475. by Y. Xing, C. J. Lee posted to dominant_negative nmd by bpcusack on 2008-08-04 10:12:29 as
	Regulation of multiple core spliceosomal proteins by alternative splicing-coupled nonsense-mediated mRNA decay. [My Copy] Molecular and cellular biology, Vol. 28, No. 13. (July 2008), pp. 4320-4330. by A. L. Saltzman, Y. K. Kim, Q. Pan, M. M. Fagnani, L. E. Maquat, B. J. Blencowe posted to nmd by bpcusack on 2008-08-04 10:10:16 as
	Proximity of the poly(A)-binding protein to a premature termination codon inhibits mammalian nonsense-mediated mRNA decay [My Copy] RNA, Vol. 14, No. 3. (March 2008), pp. 563-576. by Ana L. Silva, PatrÃcia Ribeiro, Ãngela InÃ¡cio, Stephen A. Liebhaber, LuÃsa RomÃ£o posted to nmd by bpcusack on 2008-07-31 22:16:22 as along with 1 person hcoller
	The canonical UPF1-dependent nonsense-mediated mRNA decay is inhibited in transcripts carrying a short open reading frame independent of sequence context. [My Copy] RNA (New York, N.Y.), Vol. 12, No. 12. (December 2006), pp. 2160-2170. by A. L. Silva, F. J. Pereira, A. Morgado, et al.J. Kong, R. Martins, P. Faustino, S. A. Liebhaber, L. Romão posted to nmd by bpcusack on 2008-07-31 22:16:00 as
	Mechanistic insights and identification of two novel factors in the C. elegans NMD pathway. [My Copy] Genes & development, Vol. 21, No. 9. (1 May 2007), pp. 1075-1085. by D. Longman, R. H. Plasterk, I. L. Johnstone, J. F. Cáceres posted to nmd by bpcusack on 2008-07-31 22:14:49 as along with 2 people and 1 group thegoose2 tharris C. elegans / WormBase
	A faux 3'-UTR promotes aberrant termination and triggers nonsense-mediated mRNA decay. [My Copy] Nature, Vol. 432, No. 7013. (4 November 2004), pp. 112-118. by N. Amrani, R. Ganesan, S. Kervestin, D. A. Mangus, S. Ghosh, A. Jacobson posted to nmd by bpcusack on 2008-07-31 22:14:04 as along with 1 person and 1 group heliopais microRNA
	Translational regulation of gene expression. [My Copy] Genome biology, Vol. 5, No. 12. (2004) by S. Kervestin, N. Amrani posted to nmd by bpcusack on 2008-07-31 22:12:50 as
	Biased codon usage near intron-exon junctions: selection on splicing enhancers, splice-site recognition or something else? [My Copy] Trends in Genetics, Vol. 21, No. 5. (May 2005), pp. 256-259. by Jean-Vincent Chamary, Laurence D. Hurst posted to cited_by_chamary nmd by bpcusack on 2008-07-15 16:24:10 as along with 2 people saunders setar
	Alternative splicing induced by nonsense mutations in the immunoglobulin mu VDJ exon is independent of truncation of the open reading frame. [My Copy] RNA (New York, N.Y.), Vol. 11, No. 2. (February 2005), pp. 139-146. by M. Bühler, O. Mühlemann posted to nas nmd by bpcusack on 2008-07-14 21:43:59 as

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duplication	57
adaptation	29
nmd	28
imprinting	22
stats	22
evol_med	20
robustness	18
speciation	18
nuts_n_bolts	16
methylation	15
retro	15
chromatin	14
cne	14
epigenetics	14
evolution	14
georgia	14
translation	14
codon_usage	12
ppi	12
protein	12
recomb	12
cited_by_chamary	11
microrna	11
exons_domains	10
mutation	10
phenotypic_mutn	10
evo_devo	9
alignment	8
alt_splice	8
chr_rearr	8
cnv	8
gene_loss	8
mothoin	8
replication	8
wiki	8
bgc	7
landscape	7
nogd	7
strand_asymm	7
dosage	6
epistasis	6
noise	6
subfunc	6
transcriptome	6
cpg	5
lynch_review	5
networks	5
promoter	5
remote_homology	5
complexity	4
dominance	4
dominant_negative	4
genome_organisn	4
ka_ks	4
molpunceqm	4
mutagenic_anomaly	4
phylogenetics	4
proteome	4
splicing	4
trim5a	4
adaptive_conflict	3
cis_regn	3
cited_by_oakey	3
duplicability	3
ese	3
figure	3
gc	3
genetic_draft	3
meiosis	3
promiscuity	3
protein_rna_structure	3
silent	3
sos	3
wtf	3
autosome_vs_xy	2
cgi	2
chaperones	2
convergence	2
directed_evoln	2
genetic_code	2
introns	2
neutral	2
paramutation	2
pos_selection	2
pufferfish	2
recip_sf	2
sodcp_rpl32	2
textmining	2
trna	2
chloroplast_genome	1
compaction	1
compensation	1
ddc	1
dmi	1
expression_level	1
gene_dosage	1
genotype_phenotype_map	1
heterohomodimers	1
heterosis	1
in_press	1
maths	1
mitochondrial_genome	1
nas	1
numt	1
phil_sci	1
phylo_fp	1
polymorph	1
pre_term	1
publicn	1
repair	1
simulation	1
style	1
tes	1

bpcusack's nmd [28 articles] Export

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