burak's library 80 articles Export

Ordered by to_read.

	Integrating large-scale functional genomic data to dissect the complexity of yeast regulatory networks. [My Copy] Nature genetics, Vol. 40, No. 7. (15 July 2008), pp. 854-861. by Jun Zhu, Bin Zhang, Erin N. Smith, et al.Becky Drees, Rachel B. Brem, Leonid Kruglyak, Roger E. Bumgarner, Eric E. Schadt posted to gene networks predictive yeast by burak on 2008-11-24 20:57:15 as along with 19 people and 1 group JoeBanks arider1 megraw TRHvidsten siebert ggallone jo_davies suteedee realzhang kengg maralena ptrobajo tmmurali guhjy roys marck caseybrown djkt srp33 Jarman Lab
	An integrative approach to reveal driver gene fusions from paired-end sequencing data in cancer [My Copy] Nature Biotechnology, Vol. 27, No. 11. (01 November 2009), pp. 1005-1011. by Xiao-Song Wang, John R. Prensner, Guoan Chen, et al.Qi Cao, Bo Han, Saravana M. Dhanasekaran, Rakesh Ponnala, Xuhong Cao, Sooryanarayana Varambally, Dafydd G. Thomas, Thomas J. Giordano, David G. Beer, Nallasivam Palanisamy, Maureen A. Sartor, Gilbert S. Omenn, Arul M. Chinnaiyan posted to tissue_microarrays throughput_data systematic_analysis lung_cancer genomic_data by burak on 2009-11-25 19:06:30 as along with 4 people and 1 group torfinnnome qayub chvlyl frohike Journal picks
	Stem cell transcriptome profiling via massive-scale mRNA sequencing [My Copy] Nature Methods, Vol. 5, No. 7. (30 May 2008), pp. 613-619. by Nicole Cloonan, Alistair R. R. Forrest, Gabriel Kolle, et al.Brooke B. A. Gardiner, Geoffrey J. Faulkner, Mellissa K. Brown, Darrin F. Taylor, Anita L. Steptoe, Shivangi Wani, Graeme Bethel, Alan J. Robertson, Andrew C. Perkins, Stephen J. Bruce, Clarence C. Lee, Swati S. Ranade, Heather E. Peckham, Jonathan M. Manning, Kevin J. McKernan, Sean M. Grimmond posted to mrna-seq orientation specific strand transcript by burak on 2009-06-11 18:47:00 as along with 22 people manduca hzoltan jwfoley heliopais jmanning2k stubrown cassj n00c natstreet poschm felsani jbhiatt vplagnol rschulz umit myourshaw megraw inesdesantiago GeeSharpMinor caseybrown guhjy gdb
	Diversity and Complexity in DNA Recognition by Transcription Factors [My Copy] Science, Vol. 324, No. 5935. (26 June 2009), pp. 1720-1723. by Gwenael Badis, Michael F. Berger, Anthony A. Philippakis, et al.Shaheynoor Talukder, Andrew R. Gehrke, Savina A. Jaeger, Esther T. Chan, Genita Metzler, Anastasia Vedenko, Xiaoyu Chen, Hanna Kuznetsov, Chi-Fong Wang, David Coburn, Daniel E. Newburger, Quaid Morris, Timothy R. Hughes, Martha L. Bulyk posted to binding factor site transcription by burak on 2009-05-18 17:15:16 as along with 22 people and 1 group nklee sconlan isimpson jbhiatt daforerog absterga mingzhi galka8_diploma fenghezi TRHvidsten ilyashl cambray rpatward tibbitts dpollard siebert JustinCrocker aalibes dipenps roys emptyhb tmmurali RockmanLab
	Tissue-specific splicing factor gene expression signatures [My Copy] Nucl. Acids Res. (24 July 2008), gkn463. by Ana R. Grosso, Anita Q. Gomes, Nuno L. Barbosa-Morais, et al.Sandra Caldeira, Natalie P. Thorne, Godfrey Grech, Marieke von Lindern, Maria Carmo-Fonseca posted to spliceosome proteins human_tissues gene_expression_profiles by burak on 2009-11-25 23:37:49 as along with 4 people inesdesantiago jfr cajunsushi aconesa
	The emerging role of splicing factors in cancer. [My Copy] EMBO reports, Vol. 9, No. 11. (31 November 2008), pp. 1087-1093. by Ana Rita R. Grosso, Sandra Martins, Maria Carmo-Fonseca posted to variants transcripts transcriptome regulatory_networks global_sequence dynamic_repertoire complexity cancer_development by burak on 2009-11-25 23:35:18 as
	Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression. [My Copy] Nature, Vol. 457, No. 7231. (12 February 2009), pp. 910-914. by Arun Sreekumar, Laila M. Poisson, Thekkelnaycke M. Rajendiran, et al.Amjad P. Khan, Qi Cao, Jindan Yu, Bharathi Laxman, Rohit Mehra, Robert J. Lonigro, Yong Li, Mukesh K. Nyati, Aarif Ahsan, Shanker Kalyana-Sundaram, Bo Han, Xuhong Cao, Jaeman Byun, Gilbert S. Omenn, Debashis Ghosh, Subramaniam Pennathur, Danny C. Alexander, Alvin Berger, Jeffrey R. Shuster, John T. Wei, Sooryanarayana Varambally, Christopher Beecher, Arul M. Chinnaiyan posted to protein_expression prostate_cancer_progression molecular_networks cancer_cell biomarkers by burak on 2009-11-25 18:42:49 as along with 2 people xtizon ajaymalik
	Overestimation of alternative splicing caused by variable probe characteristics in exon arrays [My Copy] Nucl. Acids Res., Vol. 37, No. 16. (1 September 2009), e107. by Dimos Gaidatzis, Kirsten Jacobeit, Edward J. Oakeley, Michael B. Stadler posted to systematic_bias exons arrays alternative_splicing by burak on 2009-11-23 22:25:34 as along with 1 person neils
	Advances in the genetics of glioblastoma: are we reaching critical mass? [My Copy] Nature Reviews Neurology, Vol. 5, No. 8. (14 July 2009), pp. 419-426. by Benjamin Purow, David Schiff posted to unexpected_discoveries review relevant_genetics radiation glioblastoma genetic_lesions gbm critical_mass chemotherapy aberrations by burak on 2009-11-23 06:38:46 as
	Prioritization of candidate cancer genes--an aid to oncogenomic studies [My Copy] Nucl. Acids Res., Vol. 36, No. 18. (1 October 2008), e115. by Simon J. Furney, Borja Calvo, Pedro Larranaga, Jose A. Lozano, Nuria Lopez-Bigas posted to prioritization management list cancer by burak on 2009-09-14 22:53:53 as along with 3 people zufar jfr barriot
	CancerGenes: a gene selection resource for cancer genome projects [My Copy] Nucl. Acids Res., Vol. 35, No. suppl_1. (12 January 2007), pp. D721-726. by Maureen E. Higgins, Martine Claremont, John E. Major, Chris Sander, Alex E. Lash posted to management list cancer by burak on 2009-09-14 22:50:52 as
	Functional organization of the transcriptome in human brain [My Copy] Nature Neuroscience, Vol. 11, No. 11. (12 October 2008), pp. 1271-1282. by Michael C. Oldham, Genevieve Konopka, Kazuya Iwamoto, et al.Peter Langfelder, Tadafumi Kato, Steve Horvath, Daniel H. Geschwind posted to network inference correlation astrocytes by burak on 2009-09-13 18:38:36 as along with 8 people and 1 group cassj jeremymiller daforerog druvus balicea dubhelix isimpson psique KCL & UCL Bioinformatics
	SHRiMP: Accurate Mapping of Short Color-space Reads [My Copy] PLoS Comput Biol, Vol. 5, No. 5. (22 May 2009), e1000386. by Stephen M. Rumble, Phil Lacroute, Adrian V. Dalca, Marc Fiume, Arend Sidow, Michael Brudno posted to solid sequencing next_generation abi by burak on 2009-09-05 19:45:15 as along with 23 people and 4 groups Julien_Fayolle heliopais jfr cthachuk hzoltan bozdagd ilanc guhjy djkt trfield n00c natstreet adijr druvus Stew farhat humburg kshameer operon stajich GeeSharpMinor AlexBateman barry Bioinformatics - CRUK Mycology Journal picks Bioinformatics
	A network model of a cooperative genetic landscape in brain tumors. [My Copy] JAMA : the journal of the American Medical Association, Vol. 302, No. 3. (15 July 2009), pp. 261-275. by Markus Bredel, Denise M. Scholtens, Griffith R. Harsh, et al.Claudia Bredel, James P. Chandler, Jaclyn J. Renfrow, Ajay K. Yadav, Hannes Vogel, Adrienne C. Scheck, Robert Tibshirani, Branimir I. Sikic posted to gbm by burak on 2009-09-03 17:26:58 as along with 3 people srp33 rdiaz daforerog
	Using hippocampal microRNA expression differences between mouse inbred strains to characterise miRNA function [My Copy] Mammalian Genome, Vol. 19, No. 7. (1 August 2008), pp. 552-560. by Michael Parsons, Christina Grimm, Jose Paya-Cano, et al.Karen Sugden, Wilfried Nietfeld, Hans Lehrach, Leonard Schalkwyk posted to hippocampus individual microrna mouse strain variation by burak on 2009-08-06 23:09:53 as along with 1 person daforerog
	A comparison of DNA copy number profiling platforms. [My Copy] Cancer research, Vol. 67, No. 21. (1 November 2007), pp. 10173-10180. by J. Greshock, B. Feng, C. Nogueira, et al.E. Ivanova, I. Perna, K. Nathanson, A. Protopopov, B. L. Weber, L. Chin posted to benchmark cgh resolution by burak on 2009-07-13 04:19:33 as along with 2 people guhjy jfr
	Resolving the resolution of array CGH. [My Copy] Genomics, Vol. 89, No. 5. (May 2007), pp. 647-653. by B. P. Coe, B. Ylstra, B. Carvalho, G. A. Meijer, C. Macaulay, W. L. Lam posted to benchmark cgh resolution by burak on 2009-07-13 04:18:07 as
	Biology of interactions: antiepidermal growth factor receptor agents. [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 25, No. 26. (10 September 2007), pp. 4057-4065. by P. M. Harari, G. W. Allen, J. A. Bonner posted to cancer drug egfr interactions by burak on 2009-06-17 20:50:50 as
	Somatic mutations affect key pathways in lung adenocarcinoma [My Copy] Nature, Vol. 455, No. 7216. (23 October 2008), pp. 1069-1075. by Li Ding, Gad Getz, David A. Wheeler, et al.Elaine R. Mardis, Michael D. Mclellan, Kristian Cibulskis, Carrie Sougnez, Heidi Greulich, Donna M. Muzny, Margaret B. Morgan, Lucinda Fulton, Robert S. Fulton, Qunyuan Zhang, Michael C. Wendl, Michael S. Lawrence, David E. Larson, Ken Chen, David J. Dooling, Aniko Sabo, Alicia C. Hawes, Hua Shen, Shalini N. Jhangiani, Lora R. Lewis, Otis Hall, Yiming Zhu, Tittu Mathew, Yanru Ren, Jiqiang Yao, Steven E. Scherer, Kerstin Clerc, Ginger A. Metcalf, Brian Ng, Aleksandar Milosavljevic, Manuel L. Gonzalez-Garay, John R. Osborne, Rick Meyer, Xiaoqi Shi, Yuzhu Tang, Daniel C. Koboldt, Ling Lin, Rachel Abbott, Tracie L. Miner, Craig Pohl, Ginger Fewell, Carrie Haipek, Heather Schmidt, Brian H. Dunford-Shore, Aldi Kraja, Seth D. Crosby, Christopher S. Sawyer, Tammi Vickery, Sacha Sander, Jody Robinson, Wendy Winckler, Jennifer Baldwin, Lucian R. Chirieac, Amit Dutt, Tim Fennell, Megan Hanna, Bruce E. Johnson, Robert C. Onofrio, Roman K. Thomas, Giovanni Tonon, Barbara A. Weir, Xiaojun Zhao, Liuda Ziaugra, Michael C. Zody, Thomas Giordano, Mark B. Orringer, Jack A. Roth, Margaret R. Spitz, Ignacio I. Wistuba, Bradley Ozenberger, Peter J. Good, Andrew C. Chang, David G. Beer, Mark A. Watson, Marc Ladanyi, Stephen Broderick, Akihiko Yoshizawa, William D. Travis, William Pao, Michael A. Province, George M. Weinstock, Harold E. Varmus, Stacey B. Gabriel, Eric S. Lander, Richard A. Gibbs, Matthew Meyerson, Richard K. Wilson posted to no-tag by burak on 2009-06-17 20:21:10 as along with 3 people jfr jbhiatt renatomilani
	Transcriptome sequencing to detect gene fusions in cancer [My Copy] Nature, Vol. 458, No. 7234. (11 January 2009), pp. 97-101. by Christopher A. Maher, Chandan Kumar-Sinha, Xuhong Cao, et al.Shanker Kalyana-Sundaram, Bo Han, Xiaojun Jing, Lee Sam, Terrence Barrette, Nallasivam Palanisamy, Arul M. Chinnaiyan posted to 454 fusion gene illumina rna-seq by burak on 2009-06-14 20:51:21 as along with 17 people hzoltan manduca stubrown ajbattle frohike torfinnnome jessopher guhjy jfr myzhang inesdesantiago dswan fenghezi jbhiatt mtagaya abizar xingxu
	RNA-Seq: a revolutionary tool for transcriptomics. [My Copy] Nature reviews. Genetics, Vol. 10, No. 1. (01 January 2009), pp. 57-63. by Zhong Wang, Mark Gerstein, Michael Snyder posted to mrna-seq review rna-seq by burak on 2009-06-11 18:52:12 as along with 41 people and 1 group hongkeun_park ngehlenborg hzoltan sandfire maren jwfoley urgi RNA-protein cthachuk heliopais GustavoLacerda rdiaz TRHvidsten dswan roys woodson8 jonilaserson gdb n00c ThomasDOtto natstreet athma druvus tonamswish fishtank daed JohnBallam jmcq dandaman cassj xingxu idonaldson raiyar inesdesantiago vplagnol jbhiatt giovanni orzenil nuin guhjy GeeSharpMinor CUBES
	Conversion of 5-Methylcytosine to 5-Hydroxymethylcytosine in Mammalian DNA by the MLL Fusion Partner TET1 [My Copy] Science (16 April 2009), 1170116. by Mamta Tahiliani, Kian P. Koh, Yinghua Shen, et al.William A. Pastor, Hozefa Bandukwala, Yevgeny Brudno, Suneet Agarwal, Lakshminarayan M. Iyer, David R. Liu, L. Aravind, Anjana Rao posted to 5 biology cool modification prime by burak on 2009-06-08 05:38:25 as along with 3 people and 1 group aprickett wsjames rschulz Oxford Virology
	The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line. [My Copy] Nature genetics, Vol. 41, No. 5. (19 May 2009), pp. 553-562. by FANTOM Consortium, Harukazu Suzuki, Alistair R. Forrest, et al.Erik van Nimwegen, Carsten O. Daub, Piotr J. Balwierz, Katharine M. Irvine, Timo Lassmann, Timothy Ravasi, Yuki Hasegawa, Michiel J. de Hoon, Shintaro Katayama, Kate Schroder, Piero Carninci, Yasuhiro Tomaru, Mutsumi Kanamori-Katayama, Atsutaka Kubosaki, Altuna Akalin, Yoshinari Ando, Erik Arner, Maki Asada, Hiroshi Asahara, Timothy Bailey, Vladimir B. Bajic, Denis Bauer, Anthony G. Beckhouse, Nicolas Bertin, Johan Björkegren, Frank Brombacher, Erika Bulger, Alistair M. Chalk, Joe Chiba, Nicole Cloonan, Adam Dawe, Josee Dostie, Pär G. Engström, Magbubah Essack, Geoffrey J. Faulkner, J. Lynn Fink, David Fredman, Ko Fujimori, Masaaki Furuno, Takashi Gojobori, Julian Gough, Sean M. Grimmond, Mika Gustafsson, Megumi Hashimoto, Takehiro Hashimoto, Mariko Hatakeyama, Susanne Heinzel, Winston Hide, Oliver Hofmann, Michael Hörnquist, Lukasz Huminiecki, Kazuho Ikeo, Naoko Imamoto, Satoshi Inoue, Yusuke Inoue, Ryoko Ishihara, Takao Iwayanagi, Anders Jacobsen, Mandeep Kaur, Hideya Kawaji, Markus C. Kerr, Ryuichiro Kimura, Syuhei Kimura, Yasumasa Kimura, Hiroaki Kitano, Hisashi Koga, Toshio Kojima, Shinji Kondo, Takeshi Konno, Anders Krogh, Adele Kruger, Ajit Kumar, Boris Lenhard, Andreas Lennartsson, Morten Lindow, Marina Lizio, Cameron Macpherson, Norihiro Maeda, Christopher A. Maher, Monique Maqungo, Jessica Mar, Nicholas A. Matigian, Hideo Matsuda, John S. Mattick, Stuart Meier, Sei Miyamoto, Etsuko Miyamoto-Sato, Kazuhiko Nakabayashi, Yutaka Nakachi, Mika Nakano, Sanne Nygaard, Toshitsugu Okayama, Yasushi Okazaki, Haruka Okuda-Yabukami, Valerio Orlando, Jun Otomo, Mikhail Pachkov, Nikolai Petrovsky, Charles Plessy, John Quackenbush, Aleksandar Radovanovic, Michael Rehli, Rintaro Saito, Albin Sandelin, Sebastian Schmeier, Christian Schönbach, Ariel S. Schwartz, Colin A. Semple, Miho Sera, Jessica Severin, Katsuhiko Shirahige, Cas Simons, George St Laurent, Masanori Suzuki, Takahiro Suzuki, Matthew J. Sweet, Ryan J. Taft, Shizu Takeda, Yoichi Takenaka, Kai Tan, Martin S. Taylor, Rohan D. Teasdale, Jesper Tegnér, Sarah Teichmann, Eivind Valen, Claes Wahlestedt, Kazunori Waki, Andrew Waterhouse, Christine A. Wells, Ole Winther, Linda Wu, Kazumi Yamaguchi, Hiroshi Yanagawa, Jun Yasuda, Mihaela Zavolan, David A. Hume, Riken Omics Science Center, Takahiro Arakawa, Shiro Fukuda, Kengo Imamura, Chikatoshi Kai, Ai Kaiho, Tsugumi Kawashima, Chika Kawazu, Yayoi Kitazume, Miki Kojima, Hisashi Miura, Kayoko Murakami, Mitsuyoshi Murata, Noriko Ninomiya, Hiromi Nishiyori, Shohei Noma, Chihiro Ogawa, Takuma Sano, Christophe Simon, Michihira Tagami, Yukari Takahashi, Jun Kawai, Yoshihide Hayashizaki posted to cancer factor network transcription by burak on 2009-06-07 23:20:35 as along with 15 people schwartzjmc rdiaz rsaito guhjy hagechouchin443 gdb tonamswish YukaH coela mtagaya bertelsen xingxu TRHvidsten renatomilani antonkratz
	Musings on genome medicine: cancer genetics and the promise of effective treatment. [My Copy] Genome medicine, Vol. 1, No. 5. (6 May 2009) by David G. Nathan, Stuart H. Orkin posted to cancer genetics review by burak on 2009-05-18 02:35:40 as
	High-Resolution Genomic Copy Number Profiling of Glioblastoma Multiforme by Single Nucleotide Polymorphism DNA Microarray. [My Copy] Molecular cancer research : MCR (12 May 2009) by Dong Yin, Seishi Ogawa, Norihiko Kawamata, et al.Patrizia Tunici, Gaetano Finocchiaro, Marica Eoli, Christian Ruckert, Thien Huynh, Gentao Liu, Motohiro Kato, Masashi Sanada, Anna Jauch, Martin Dugas, Keith L L. Black, H Phillip P. Koeffler posted to copy gbm number variation by burak on 2009-05-18 02:07:18 as
	High-resolution Global Genomic Survey of 178 Gliomas Reveals Novel Regions of Copy Number Alteration and Allelic Imbalances. [My Copy] Cancer Res, Vol. 66, No. 19. (1 October 2006), pp. 9428-9436. by Y. Kotliarov, M. E. Steed, N. Christopher, et al.J. Walling, Q. Su, A. Center, J. Heiss, M. Rosenblum, T. Mikkelsen, J. C. Zenklusen, H. A. Fine posted to gbm microarray by burak on 2009-05-15 22:55:54 as along with 2 people bioguru2000 frohike
	Using Ribosomal Protein Genes as Reference: A Tale of Caution [My Copy] PLoS ONE, Vol. 3, No. 3. (26 March 2008), e1854. by Lieven Thorrez, Katrijn Van Deun, Léon-Charles Tranchevent, et al.Leentje Van Lommel, Kristof Engelen, Kathleen Marchal, Yves Moreau, Iven Van Mechelen, Frans Schuit posted to housekeeping ribosomes tissues by burak on 2009-01-22 00:14:40 as along with 2 people lthorrez ptrobajo
	Biochem. Soc. Trans (2008) 36, 300-305 - Roel Quintensand others - Pancreatic b-Cell: Birth, Life and Death [My Copy] posted to beta cells expression gene islets pancreas specific tissue by burak on 2009-01-22 00:10:37 as
	Predicting biological networks from genomic data. [My Copy] FEBS Lett (21 February 2008) by Eoghan D D. Harrington, Lars J J. Jensen, Peer Bork posted to biological genomics networks prediction by burak on 2008-12-08 05:57:29 as along with 7 people Borelli APRegier jmeppley jfr dullhunk larsjuhljensen guhjy
	Catalogues of mammalian long noncoding RNAs: modest conservation and incompleteness [My Copy] Genome Biology, Vol. 10, No. 11. (2009), R124. by Ana Marques, Chris Ponting posted to ncrna by burak on 2009-11-26 03:57:19 as along with 6 people and 2 groups hrogers yogita bdessailly daforerog reyez gdb Orengo Group Journal Picks Journal picks
	The spliceosome as target for anticancer treatment [My Copy] British Journal of Cancer, Vol. 100, No. 2. (25 November 2008), pp. 228-232. by R. J. van Alphen, E. A. C. Wiemer, H. Burger, F. A. L. M. Eskens posted to tumors spliceosome cancer by burak on 2009-11-25 23:30:15 as along with 1 person inesdesantiago
	AUGUSTUS incorporating RNA-Seq [My Copy] posted to sequencing rna-seq next-gen by burak on 2009-11-25 23:20:26 as
	Glioma stem cells: better flat than round. [My Copy] Cell stem cell, Vol. 4, No. 6. (5 June 2009), pp. 466-467. by Kevin Woolard, Howard A. Fine posted to stem spheroids monolayer gbm culture comment cell by burak on 2009-11-25 20:55:03 as
	Single-Cell Profiling Identifies Aberrant STAT5 Activation in Myeloid Malignancies with Specific Clinical and Biologic Correlates [My Copy] Cancer Cell, Vol. 14, No. 4. (07 October 2008), pp. 335-343. by Nikesh Kotecha, Nikki J. Flores, Jonathan M. Irish, et al.Erin F. Simonds, Debbie S. Sakai, Sophie Archambeault, Ernesto Diaz-Flores, Marc Coram, Kevin M. Shannon, Garry P. Nolan posted to stimulations by burak on 2009-11-25 06:17:12 as
	Learning cyclic signaling pathway structures while minimizing data requirements. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2009), pp. 63-74. by K. Sachs, S. Itani, J. Fitzgerald, et al.L. Wille, B. Schoeberl, M. A. Dahleh, G. P. Nolan posted to signaling_pathways regulatory_structures network_structure bayesian_networks by burak on 2009-11-25 06:14:07 as along with 1 person frohike
	Time-varying modeling of gene expression regulatory networks using the wavelet dynamic vector autoregressive method [My Copy] Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. 1623-1630. by A. Fujita, J. R. Sato, H. M. Garay-Malpartida, P. A. Morettin, M. C. Sogayar, C. E. Ferreira posted to no-tag by burak on 2009-11-24 14:09:01 as along with 1 person Borelli
	Integrative genome-wide analysis reveals a robust genomic glioblastoma signature associated with copy number driving changes in gene expression [My Copy] Genes, Chromosomes and Cancer, Vol. 48, No. 1. (2009), pp. 55-68. by Marie de Tayrac, Amandine Etcheverry, Marc Aubry, et al.Stephan Saïkali, Abderrahmane Hamlat, Veronique Quillien, André Le Treut, Marie-Dominique Galibert, Jean Mosser posted to no-tag by burak on 2009-11-24 08:43:09 as along with 6 people and 1 group oelemento jfr chrisamiller Zephyrus rdiaz srp33 Roswell Cancer Crosstalk
	Network of Cancer Genes: a web resource to analyze duplicability, orthology and network properties of cancer genes [My Copy] Nucl. Acids Res. (11 November 2009), gkp957. by Adnan S. Syed, Matteo D'Antonio, Francesca D. Ciccarelli posted to web_resource topological_properties interaction_network human_protein human_cancer genomes cancer_proteins cancer_genes by burak on 2009-11-24 01:09:49 as along with 1 person daforerog
	Genetic Pathways to Primary and Secondary Glioblastoma [My Copy] Am J Pathol, Vol. 170, No. 5. (1 May 2007), pp. 1445-1453. by Hiroko Ohgaki, Paul Kleihues posted to protein_levels prognosis precursor p16ink4a methylation lesion human_brain glioblastomas genetic_pathways genetic_alteration expression_profiles distinct_disease diffuse_astrocytoma brain_tumor anaplastic_astrocytoma 10q by burak on 2009-11-23 00:06:31 as along with 6 people ekotelnikova smuekusc dendrimer cerami Marcory srp33
	A sequence-level map of chromosomal breakpoints in the MCF-7 breast cancer cell line yields insights into the evolution of a cancer genome [My Copy] Genome Research, Vol. 19, No. 2. (9 February 2009), pp. 167-177. by Oliver A. Hampton, Petra Den Hollander, Christopher A. Miller, et al.David A. Delgado, Jian Li, Cristian Coarfa, Ronald A. Harris, Stephen Richards, Steven E. Scherer, Donna M. Muzny, Richard A. Gibbs, Adrian V. Lee, Aleksandar Milosavljevic posted to sequenc next-gen cgh by burak on 2009-10-08 06:16:44 as along with 6 people and 2 groups chrisamiller myzhang jiezhou renatomilani songpku Zephyrus Roswell Cancer Crosstalk Breast Cancer Reading Club
	Basic Principles and Technologies for Deciphering the Genetic Map of Cancer [My Copy] World Journal of Surgery, Vol. 33, No. 4. (1 April 2009), pp. 615-629. by Georgios Voidonikolas, Stephanie Kreml, Changyi Chen, et al.William Fisher, F. Charles Brunicardi, Richard Gibbs, Marie-Claude Gingras posted to p4medicine management list cancer by burak on 2009-09-14 23:00:54 as
	WhichGenes: a web-based tool for gathering, building, storing and exporting gene sets with application in gene set enrichment analysis [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W329-334. by Daniel Glez-Pena, Gonzalo Gomez-Lopez, David G. Pisano, Florentino Fdez-Riverola posted to management list cancer by burak on 2009-09-14 22:57:52 as along with 5 people frohike yaredo daforerog renatomilani guhjy
	AGTR1 overexpression defines a subset of breast cancer and confers sensitivity to losartan, an AGTR1 antagonist [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 25. (23 June 2009), pp. 10284-10289. by Daniel R. Rhodes, Bushra Ateeq, Qi Cao, et al.Scott A. Tomlins, Rohit Mehra, Bharathi Laxman, Shanker Kalyana-Sundaram, Robert J. Lonigro, Beth E. Helgeson, Mahaveer S. Bhojani, Alnawaz Rehemtulla, Celina G. Kleer, Daniel F. Hayes, Peter C. Lucas, Sooryanarayana Varambally, Arul M. Chinnaiyan posted to aberration amplification cancer genome next-gen by burak on 2009-08-09 02:35:41 as along with 2 people manduca lwaldron
	Cancer attractors: A systems view of tumors from a gene network dynamics and developmental perspective [My Copy] Seminars in Cell & Developmental Biology, Vol. 20, No. 7. (10 September 2009), pp. 869-876. by Sui Huang, Ingemar Ernberg, Stuart Kauffman posted to attractors biology cancer gene networks stable systems by burak on 2009-08-07 03:38:13 as along with 1 person joseph_x_zhou
	An integrative approach for causal gene identification and gene regulatory pathway inference [My Copy] Bioinformatics, Vol. 22, No. 14. (15 July 2006), pp. e489-496. by Zhidong Tu, Li Wang, Michelle N. Arbeitman, Ting Chen, Fengzhu Sun posted to between causal expression gene individuals mouse variation by burak on 2009-08-07 00:03:33 as along with 3 people and 1 group ruichu frohike jo_davies iDataOLD
	Transcriptional profiling of C57 and DBA strains of mice in the absence and presence of morphine [My Copy] BMC Genomics, Vol. 8, No. 1. (16 March 2007), 76. by Dorothy Grice, Ilkka Reenila, Pekka Mannisto, et al.Andrew Brooks, George Smith, Greg Golden, Joseph Buxbaum, Wade Berrettini posted to accumbens brain individual microarray mouse nucleus phenome variation by burak on 2009-08-07 00:00:09 as along with 1 person Terkko
	Gene expression variation between mouse inbred strains [My Copy] BMC Genomics, Vol. 5, No. 1. (2004), 57. by Rolf Turk, Peter '. Hoen, Ellen Sterrenburg, et al.Renee de Menezes, Emile de Meijer, Judith Boer, Gert J. van Ommen, Johan den Dunnen posted to individual microarray mouse muscle phenome variation by burak on 2009-08-06 23:58:48 as
	GENETICS. The Human Variome Project. [My Copy] Science (New York, N.Y.), Vol. 322, No. 5903. (7 November 2008), pp. 861-862. by Richard G. Cotton, Arleen D. Auerbach, Myles Axton, et al.Carol Isaacson I. Barash, Samuel F. Berkovic, Anthony J. Brookes, John Burn, Garry Cutting, Johan T. den Dunnen, Paul Flicek, Nelson Freimer, Marc S. Greenblatt, Heather J. Howard, Michael Katz, Finlay A. Macrae, Donna Maglott, Gabriela Möslein, Sue Povey, Rajkumar S. Ramesar, Carolyn S. Richards, Daniela Seminara, Timothy D. Smith, María-Jesús J. Sobrido, Jan Helge H. Solbakk, Rudolph E. Tanzi, Sean V. Tavtigian, Graham R. Taylor, Joji Utsunomiya, Michael Watson posted to human individual project variation variome by burak on 2009-08-06 23:56:22 as along with 6 people daforerog psique jfr reyez neils pkonings
	Gene expression profiling in the striatum of inbred mouse strains with distinct opioid-related phenotypes [My Copy] BMC Genomics, Vol. 7, No. 1. (13 June 2006), 146. by Michal Korostynski, Dorota K. Chowaniec, Marcin Piechota, Ryszard Przewlocki posted to brain individual microarray mouse normal phenotype striatum variation by burak on 2009-08-06 23:54:32 as
	Genetic background influences murine prostate gene expression: implications for cancer phenotypes [My Copy] Genome Biology, Vol. 8, No. 6. (18 June 2007), R117. by Daniella B. Frias, Colin Pritchard, Brigham Mecham, Ilsa Coleman, Peter Nelson posted to database male mouse normal phenome prostate by burak on 2009-08-06 23:37:25 as

Note: You may cite this page as: http://www.citeulike.org/user/burak/order/to_read

Result page: 1 2 Next

gbm	14
cancer	13
mouse	12
variation	11
microarray	9
individual	8
gene	7
rna-seq	7
next-gen	6
sequencing	6
networks	5
review	5
cgh	4
list	4
management	4
phenome	4
brain	3
comment	3
expression	3
genetics	3
illumina	3
normal	3
abi	2
benchmark	2
biology	2
cell	2
database	2
emt	2
factor	2
microrna	2
model	2
mrna-seq	2
network	2
proteomics	2
resolution	2
solid	2
specific	2
spliceosome	2
stem	2
strategy	2
tissue	2
transcription	2
10q	1
454	1
5	1
aa	1
aberration	1
aberrations	1
accumbens	1
alternative_splicing	1
amplification	1
analysis	1
anaplastic_astrocytoma	1
angiogenic	1
apaf1	1
arrays	1
astrocytes	1
attractors	1
bayesian_networks	1
beta	1
between	1
bias	1
binding	1
biological	1
biomarker	1
biomarkers	1
blood	1
brain_tumor	1
cancer_cell	1
cancer_development	1
cancer_genes	1
cancer_proteins	1
causal	1
cells	1
chemotherapy	1
chip	1
comparison	1
complexity	1
cool	1
copy	1
correlation	1
critical_mass	1
culture	1
design	1
diffuse_astrocytoma	1
distinct_disease	1
drug	1
dyke	1
dynamic_repertoire	1
effective	1
egfr	1
encode	1
eqtl	1
error	1
exons	1
expression_profiles	1
first	1
fusion	1
gene_expression_profiles	1
genetic_alteration	1
genetic_lesions	1
genetic_pathways	1
genome	1
genomes	1
genomic_data	1
genomics	1
glioblastoma	1
glioblastomas	1
global_sequence	1
hippocampus	1
holland	1
housekeeping	1
human	1
human_brain	1
human_cancer	1
human_protein	1
human_tissues	1
imaging	1
individuals	1
inference	1
interaction	1
interaction_network	1
interactions	1
invasive	1
islets	1
itraq	1
jay	1
lesion	1
liver	1
lung_cancer	1
luxembourg	1
male	1
meta-analysis	1
methylation	1
microenvironment	1
mir26	1
models	1
modification	1
molecular_networks	1
monolayer	1
multidimensional	1
muscle	1
ncrna	1
network_structure	1
next_generation	1
nucleus	1
number	1
orientation	1
orthotopic	1
p16ink4a	1
p4medicine	1
p53	1
pancreas	1
phenotype	1
ppi	1
precursor	1
prediction	1
predictive	1
prime	1
prioritization	1
prognosis	1
project	1
prostate	1
prostate_cancer_progression	1
protein_expression	1
protein_levels	1
proteins	1
pten	1
radiation	1
rat	1
rb	1
regulatory_networks	1
regulatory_structures	1
relevant_genetics	1
ribosomes	1
sequenc	1
signaling_pathways	1
site	1
snp	1
spheroids	1
stable	1
stimulations	1
strain	1
strand	1
striatum	1
summary	1
systematic_analysis	1
systematic_bias	1
systems	1
terry	1
theory	1
therapy	1
throughput_data	1
tissue_microarrays	1
tissues	1
topological_properties	1
transcript	1
transcriptome	1
transcripts	1
tumors	1
unexpected_discoveries	1
van	1
variants	1
variome	1
vesses	1
visualization	1
web_resource	1
yeast	1

burak's library 80 articles Export

burak's tags