cactus's library 389 articles Export

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	Minimalist Protein Model as a Diagnostic Tool for Misfolding and Aggregation [My Copy] Journal of Molecular Biology, Vol. 363, No. 1. (13 October 2006), pp. 297-308. by Silvina Matysiak, Cecilia Clementi posted to folding md model protein by cactus on 2008-04-18 12:26:33 as
	Nucleation of an Allosteric Response via Ligand-induced Loop Folding [My Copy] Journal of Molecular Biology, Vol. 373, No. 1. (12 October 2007), pp. 96-111. by Saranga Naganathan, Dorothy Beckett posted to allostery dimerization experiment folding by cactus on 2008-04-18 10:06:03 as
	Protein folding under confinement: A role for solvent [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 25. (19 June 2007), pp. 10430-10434. by Del Lucent, V. Vishal, Vijay S. Pande posted to confinement for_ref fullatom md simulation by cactus on 2008-09-29 11:12:32 as along with 4 people carlosjavierna melting cjeans rph
	Molecule-Mimetic Chemistry and Mesoscale Self-Assembly [My Copy] Accounts of Chemical Research, Vol. 34, No. 3. (1 March 2001), pp. 231-238. by Ned B. Bowden, Marcus Weck, Insung S. Choi, George M. Whitesides posted to self_assembly fun chemistry by cactus on 2009-09-08 03:06:47 as
	Confinement as a determinant of macromolecular structure and reactivity. [My Copy] Biophysical journal, Vol. 63, No. 4. (October 1992), pp. 1090-1100. by A. P. Minton posted to crowding theory by cactus on 2009-06-11 07:58:03 as
	Effect of macromolecular crowding upon the structure and function of an enzyme: glyceraldehyde-3-phosphate dehydrogenase [My Copy] Biochemistry, Vol. 20, No. 17. (1 August 1981), pp. 4821-4826. by A. P. Minton, J. Wilf posted to crowding by cactus on 2009-06-11 07:50:02 as
	The kinetics of formation of native ribonuclease during oxidation of the reduced polypeptide chain. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 47 (15 September 1961), pp. 1309-1314. by C. B. ANFINSEN, E. HABER, M. SELA, F. H. WHITE posted to experiment folding historical protein by cactus on 2009-06-04 10:43:53 as along with 3 people scampos mcbla GeeSharpMinor
	Principles that govern the folding of protein chains. [My Copy] Science (New York, N.Y.), Vol. 181, No. 96. (20 July 1973), pp. 223-230. by C. B. Anfinsen posted to folding historical protein by cactus on 2009-06-04 10:29:28 as along with 7 people dfdong rsaito karbak thaliana fjc1 rabio granujilla
	How RNA Unfolds and Refolds [My Copy] Annual Review of Biochemistry, Vol. 77, No. 1. (2008), pp. 77-100. by Pan T. X. Li, Jeffrey Vieregg, Ignacio Tinoco posted to protein review rna single_molecule by cactus on 2009-04-16 08:07:35 as along with 2 people eskay aip
	RNA folding during transcription. [My Copy] Annual review of biophysics and biomolecular structure, Vol. 35 (2006), pp. 161-175. by T. Pan, T. Sosnick posted to folding review rna by cactus on 2009-04-16 06:29:43 as along with 1 person austin
	STRATEGIES FOR RNA FOLDING AND ASSEMBLY [My Copy] Nat Rev Mol Cell Biol, Vol. 5, No. 11. (November 2004), pp. 908-919. by Renee Schroeder, Andrea Barta, Katharina Semrad posted to folding interaction review rna by cactus on 2009-04-16 06:13:12 as along with 3 people and 3 groups marcius condon kieran101 beta BioinfoCIPF SGU-CIPF
	An Allosteric Circuit in Caspase-1 [My Copy] Journal of Molecular Biology, Vol. 381, No. 5. (19 September 2008), pp. 1157-1167. by Debajyoti Datta, Justin M. Scheer, Michael J. Romanowski, James A. Wells posted to allostery dimerization experiment mutation protein structural_change by cactus on 2009-04-07 08:39:24 as
	Two-state selection of conformation-specific antibodies [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 9. (3 March 2009), pp. 3071-3076. by Junjun Gao, Sachdev S. Sidhu, James A. Wells posted to allostery dimerization experiment protein structural_change by cactus on 2009-04-07 08:27:35 as along with 1 person pineapple
	Mechanical unfolding of RNA hairpins [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 19. (10 May 2005), pp. 6789-6794. by Changbong Hyeon, D. Thirumalai posted to coarse-grained rna simulation by cactus on 2009-04-06 11:01:45 as along with 1 person Elena_Zubova
	Structure of the 70S ribosome complexed with mRNA and tRNA. [My Copy] Science (New York, N.Y.), Vol. 313, No. 5795. (29 September 2006), pp. 1935-1942. by M. Selmer, C. M. Dunham, F. V. Murphy, et al.A. Weixlbaumer, S. Petry, A. C. Kelley, J. R. Weir, V. Ramakrishnan posted to experiment protein ribosome rna structure by cactus on 2009-04-06 10:52:57 as along with 4 people kirasato Nuffnuff saunders jrweir82
	Crystal Structure of the Ribosome at 5.5 A Resolution [My Copy] Science, Vol. 292, No. 5518. (4 May 2001), pp. 883-896. by Marat M. Yusupov, Gulnara Z. Yusupova, Albion Baucom, et al.Kate Lieberman, Thomas N. Earnest, J. H. D. Cate, Harry F. Noller posted to experiment protein ribosome rna structure by cactus on 2009-04-06 10:16:46 as along with 7 people and 3 groups midime bratwurst hadesnumb anita marcius eckart_bindewald equipediaz structure-bii BioinfoCIPF SGU-CIPF
	Structure of the 30S ribosomal subunit [My Copy] Nature, Vol. 407, No. 6802. (21 September 2000), pp. 327-339. by Brian T. Wimberly, Ditlev E. Brodersen, William M. Clemons, et al.Robert J. Morgan-Warren, Andrew P. Carter, Clemens Vonrhein, Thomas Hartsch, V. Ramakrishnan posted to experiment protein ribosome rna structure xray-crystal-structure by cactus on 2009-04-06 09:42:04 as
	The Complete Atomic Structure of the Large Ribosomal Subunit at 2.4 A Resolution [My Copy] Science, Vol. 289, No. 5481. (11 August 2000), pp. 905-920. by Nenad Ban, Poul Nissen, Jeffrey Hansen, Peter B. Moore, Thomas A. Steitz posted to experiment protein ribosome rna structure xray-crystal-structure by cactus on 2009-04-06 09:29:02 as along with 5 people and 1 group A_Coletta_Thesis mirkocortese P2324548 eckart_bindewald ruvido Structural Biology Group TorVergata
	Structure of Functionally Activated Small Ribosomal Subunit at 3.3 p Resolution [My Copy] Cell, Vol. 102, No. 5. (September 2000), pp. 615-623. by F. Schluenzen posted to experiment protein ribosome rna structure xray-crystal-structure by cactus on 2009-04-06 08:54:13 as
	High Resolution Structure of the Large Ribosomal Subunit from a Mesophilic Eubacterium [My Copy] Cell, Vol. 107, No. 5. (30 November 2001), pp. 679-688. by Joerg Harms, Frank Schluenzen, Raz Zarivach, et al.Anat Bashan, Sharon Gat, Ilana Agmon, Heike Bartels, François Franceschi, Ada Yonath posted to experiment protein ribosome rna structure xray-crystal-structure by cactus on 2009-04-06 08:51:19 as
	Ribosome Structure and the Mechanism of Translation [My Copy] Cell, Vol. 108, No. 4. (22 February 2002), pp. 557-572. by V. Ramakrishnan posted to review ribosome by cactus on 2009-04-06 08:49:32 as along with 1 person Roshni
	A structural understanding of the dynamic ribosome machine [My Copy] Nature Reviews Molecular Cell Biology, Vol. 9, No. 3., pp. 242-253. by Thomas A. Steitz posted to review ribosome by cactus on 2009-04-06 08:48:57 as along with 1 person zwang
	Ribosome-induced changes in elongation factor Tu conformation control GTP hydrolysis. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 4. (27 January 2009), pp. 1063-1068. by E. Villa, J. Sengupta, L. G. Trabuco, et al.J. LeBarron, W. T. Baxter, T. R. Shaikh, R. A. Grassucci, P. Nissen, M. Ehrenberg, K. Schulten, J. Frank posted to allostery em protein ribosome structure by cactus on 2009-04-03 08:13:23 as
	A network biology approach to aging in yeast [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 4. (27 January 2009), pp. 1145-1150. by David R. Lorenz, Charles R. Cantor, James J. Collins posted to analysis clip2 gene_expression network by cactus on 2009-04-01 08:05:38 as along with 4 people TRHvidsten rdiaz bcondon brianb
	Identification of direct residue contacts in protein–protein interaction by message passing [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 1. (6 January 2009), pp. 67-72. by Martin Weigt, Robert A. White, Hendrik Szurmant, James A. Hoch, Terence Hwa posted to analysis protein-protein_interaction by cactus on 2009-04-01 06:44:13 as along with 6 people and 2 groups orr haisent sobolevnrm sjcockell akraemer hmk KeatingJClub baker-group
	Folding energy landscape and network dynamics of small globular proteins [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 1. (6 January 2009), pp. 73-78. by Naoto Hori, George Chikenji, R. Stephen Berry, Shoji Takada posted to analysis folding pathway pca protein by cactus on 2009-04-01 06:34:02 as along with 1 person scampos
	Crystal structure of human spliceosomal U1 snRNP at 5.5 Å resolution [My Copy] Nature, Vol. 458, No. 7237., pp. 475-480. by Daniel, Chris Oubridge, Adelaine K. W. Leung, Jade Li, Kiyoshi Nagai posted to complex protein rna splicing xray-crystal-structure by cactus on 2009-04-01 04:46:35 as
	Cellular prion protein mediates impairment of synaptic plasticity by amyloid-[bgr] oligomers [My Copy] Nature, Vol. 457, No. 7233. (26 February 2009), pp. 1128-1132. by Juha Lauren, David A. Gimbel, Haakon B. Nygaard, John W. Gilbert, Stephen M. Strittmatter posted to amyloid prion protein-protein_interaction by cactus on 2009-03-16 09:07:07 as along with 3 people applebyb daforerog paulschlesinger
	Protein structure determination in living cells by in-cell NMR spectroscopy [My Copy] Nature, Vol. 458, No. 7234. (5 March 2009), pp. 102-105. by Daisuke Sakakibara, Atsuko Sasaki, Teppei Ikeya, et al.Junpei Hamatsu, Tomomi Hanashima, Masaki Mishima, Masatoshi Yoshimasu, Nobuhiro Hayashi, Tsutomu Mikawa, Markus Walchli, Brian O. Smith, Masahiro Shirakawa, Peter Guntert, Yutaka Ito posted to experiment in_vivo nmr protein structure by cactus on 2009-03-16 09:07:02 as along with 9 people and 1 group sebk flbarroso eallain barry cychen_cite ts3435 neils alexknight absterga McCammon
	High-resolution multi-dimensional NMR spectroscopy of proteins in human cells [My Copy] Nature, Vol. 458, No. 7234. (5 March 2009), pp. 106-109. by Kohsuke Inomata, Ayako Ohno, Hidehito Tochio, et al.Shin Isogai, Takeshi Tenno, Ikuhiko Nakase, Toshihide Takeuchi, Shiroh Futaki, Yutaka Ito, Hidekazu Hiroaki, Masahiro Shirakawa posted to experiment in_vivo nmr protein structure by cactus on 2009-03-11 09:42:53 as along with 5 people sebk flbarroso neils alexknight absterga
	Friction laws at the nanoscale [My Copy] Nature, Vol. 457, No. 7233. (26 February 2009), pp. 1116-1119. by Yifei Mo, Kevin T. Turner, Izabela Szlufarska posted to clip2 md physics simulation by cactus on 2009-03-11 08:45:11 as along with 1 person pick600
	Intersubunit coordination in a homomeric ring ATPase [My Copy] Nature (07 January 2009) by Jeffrey R. Moffitt, Yann R. Chemla, K. Aathavan, et al.Shelley Grimes, Paul J. Jardine, Dwight L. Anderson, Carlos Bustamante posted to allostery experiment motor single_molecule by cactus on 2009-02-02 09:16:24 as along with 4 people hsekiguc okapi devinli melting
	Pulsed contractions of an actinmyosin network drive apical constriction [My Copy] Nature (23 November 2008) by Adam C. Martin, Matthias Kaschube, Eric F. Wieschaus posted to cell clip2 experiment by cactus on 2009-02-02 08:39:26 as along with 2 people TheoBioPhys TeamAC2009
	The nature of the globular- to fibrous-actin transition [My Copy] Nature, Vol. 457, No. 7228. (22 January 2009), pp. 441-445. by Toshiro Oda, Mitsusada Iwasa, Tomoki Aihara, Yuichiro Maeda, Akihiro Narita posted to actin motor polymerization protein structure xray-diffraction by cactus on 2009-02-02 08:35:07 as along with 2 people loison melting
	Flipping the Switch from Monomeric to Dimeric CV-N Has Little Effect on Antiviral Activity [My Copy] Structure, Vol. 12, No. 10. (October 2004), pp. 1799-1807. by L. Barrientos, F. Lasala, R. Delgado, A. Sanchez, A. Gronenborn posted to domain_swapping experiment function nmr protein by cactus on 2009-01-27 07:54:45 as
	Structures of the Complexes of a Potent Anti-HIV Protein Cyanovirin-N and High Mannose Oligosaccharides [My Copy] J. Biol. Chem., Vol. 277, No. 37. (6 September 2002), pp. 34336-34342. by Istvan Botos, Barry R. O'Keefe, Shilpa R. Shenoy, et al.Laura K. Cartner, Daniel M. Ratner, Peter H. Seeberger, Michael R. Boyd, Alexander Wlodawer posted to dimer domain_swapping protein structure xray-crystal-structure by cactus on 2009-01-27 07:47:15 as along with 1 person papatonyhill
	The domain-swapped dimer of cyanovirin-N contains two sets of oligosaccharide binding sites in solution [My Copy] Biochemical and Biophysical Research Communications, Vol. 298, No. 4. (November 2002), pp. 598-602. by L. G. Barrientos, A. M. Gronenborn posted to dimer nmr protein structure by cactus on 2009-01-27 07:40:06 as
	Protein reconstitution and three-dimensional domain swapping: Benefits and constraints of covalency [My Copy] Protein Science, Vol. 16, No. 11. (2007), pp. 2317-2333. by Jannette Carey, Stina Lindman, Mikael Bauer, Sara Linse posted to domain_swapping oligomer protein review by cactus on 2009-01-27 07:30:37 as
	Deposition Diseases and 3D Domain Swapping [My Copy] Structure, Vol. 14, No. 5. (May 2006), pp. 811-824. by M. Bennett, M. Sawaya, D. Eisenberg posted to domain_swapping oligomer protein review by cactus on 2009-01-27 07:25:01 as
	Crystal structure of cyanovirin-N, a potent HIV-inactivating protein, shows unexpected domain swapping [My Copy] Journal of Molecular Biology, Vol. 288, No. 3. (07 May 1999), pp. 403-412. by F. Yang posted to domain_swapping protein structure xray-crystal-structure by cactus on 2009-01-27 07:10:59 as
	Solution Structure of a Cyanovirin-N:Manα1-2Manα ComplexStructural Basis for High-Affinity Carbohydrate-Mediated Binding to gp120 [My Copy] Structure, Vol. 9, No. 10. (October 2001), pp. 931-940. by C. Bewley posted to nmr protein structure by cactus on 2009-01-27 05:48:52 as
	Solution and crystal structures of a sugar binding site mutant of cyanovirin-N: no evidence of domain swapping. [My Copy] Structure (London, England : 1993), Vol. 16, No. 8. (August 2008), pp. 1183-1194. by E. Matei, W. Furey, A. M. Gronenborn posted to nmr protein structure by cactus on 2009-01-23 09:53:10 as along with 1 person barneb
	The Evolutionarily Conserved Family of Cyanovirin-N Homologs: Structures and Carbohydrate Specificity [My Copy] Structure, Vol. 16, No. 4. (08 April 2008), pp. 570-584. by L. Koharudin, A. Viscomi, J. Jee, S. Ottonello, A. Gronenborn posted to analysis homologue protein sequence by cactus on 2009-01-23 09:00:38 as
	Solution structure of cyanovirin-N, a potent HIV-inactivating protein [My Copy] Nat Struct Mol Biol, Vol. 5, No. 7. (July 1998), pp. 571-578. by Carole A. Bewley, Kirk R. Gustafson, Michael R. Boyd, et al.David G. Covell, Ad Bax, Marius G. Clore, Angela M. Gronenborn posted to nmr protein structure by cactus on 2009-01-23 08:49:49 as
	Conformational gating of dimannose binding to the antiviral protein cyanovirin revealed from the crystal structure at 1.35 A resolution [My Copy] Protein Sci, Vol. 17, No. 5. (1 May 2008), pp. 939-944. by Raimund Fromme, Zivile Katiliene, Petra Fromme, Giovanna Ghirlanda posted to protein structure xray-crystal-structure by cactus on 2009-01-23 08:36:44 as along with 1 person barneb
	Thermodynamics and kinetics of protein folding under confinement [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 51. (23 December 2008), pp. 20233-20238. by Jeetain Mittal, Robert B. Best posted to confinement crowding diffusion folding protein simulation by cactus on 2009-01-20 07:47:58 as along with 1 person itmeson
	Real-Time DNA Sequencing from Single Polymerase Molecules [My Copy] Science, Vol. 323, No. 5910. (2 January 2009), pp. 133-138. by John Eid, Adrian Fehr, Jeremy Gray, et al.Khai Luong, John Lyle, Geoff Otto, Paul Peluso, David Rank, Primo Baybayan, Brad Bettman, Arkadiusz Bibillo, Keith Bjornson, Bidhan Chaudhuri, Frederick Christians, Ronald Cicero, Sonya Clark, Ravindra Dalal, Alex deWinter, John Dixon, Mathieu Foquet, Alfred Gaertner, Paul Hardenbol, Cheryl Heiner, Kevin Hester, David Holden, Gregory Kearns, Xiangxu Kong, Ronald Kuse, Yves Lacroix, Steven Lin, Paul Lundquist, Congcong Ma, Patrick Marks, Mark Maxham, Devon Murphy, Insil Park, Thang Pham, Michael Phillips, Joy Roy, Robert Sebra, Gene Shen, Jon Sorenson, Austin Tomaney, Kevin Travers, Mark Trulson, John Vieceli, Jeffrey Wegener, Dawn Wu, Alicia Yang, Denis Zaccarin, Peter Zhao, Frank Zhong, Jonas Korlach, Stephen Turner posted to clip2 dna-polymerase experiment fluorescent single_molecule visualization by cactus on 2009-01-20 06:21:51 as along with 37 people and 3 groups operon n00c kinestetika mtagaya jlgreen dna idoerg absterga lukzky ImranRaoufMalik Archaeogenetics inesdesantiago 7ac5 wimufi jasontsai mlangill melting polivares pkonings natstreet fhalbrit druvus felsani samjlord Stew ghattem nedwards myzhang pengchy jbhiatt GeeSharpMinor GustavoLacerda azazello sconlan alexknight emptyhb caseybrown iSEEM moernerlab Bioinformatics - CRUK
	Structure and Functional Role of Dynein's Microtubule-Binding Domain [My Copy] Science, Vol. 322, No. 5908. (12 December 2008), pp. 1691-1695. by Andrew P. Carter, Joan E. Garbarino, Elizabeth M. Wilson-Kubalek, et al.Wesley E. Shipley, Carol Cho, Ronald A. Milligan, Ronald D. Vale, I. R. Gibbons posted to clip2 dynein experiment motor structure xray-crystal-structure by cactus on 2009-01-19 09:29:31 as along with 4 people ClaireFBBurns zwang hsekiguc kshundyak
	Transcription inactivation through local refolding of the RNA polymerase structure [My Copy] Nature (22 October 2008) by Georgiy A. Belogurov, Marina N. Vassylyeva, Anastasiya Sevostyanova, et al.James R. Appleman, Alan X. Xiang, Ricardo Lira, Stephen E. Webber, Sergiy Klyuyev, Evgeny Nudler, Irina Artsimovitch, Dmitry G. Vassylyev posted to clip2 experiment folding inhibitor protein rna-polymerase structure xray-crystal-structure by cactus on 2009-01-19 08:55:37 as
	Chaperonin complex with a newly folded protein encapsulated in the folding chamber. [My Copy] Nature, Vol. 457, No. 7225. (1 January 2009), pp. 107-110. by D. K. Clare, P. J. Bakkes, H. van Heerikhuizen, S. M. van der Vies, H. R. Saibil posted to chaperonin em experiment protein structure by cactus on 2009-01-19 08:22:09 as along with 2 people and 1 group noraziz jmrivort Supramolecular

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experiment	141
protein	100
motor	87
myosin	74
clip2	55
structure	50
review	41
md	39
amyloid	38
xray-crystal-structure	33
allostery	29
clip	25
nmr	25
folding	24
kinesin	23
structural_change	21
model	18
simulation	18
analysis	17
dimer	17
stability	17
crowding	16
fullatom	16
binding	15
intrinsic_disorder	14
mutation	14
rna	14
theory	14
network	13
coarse-grained	11
fluorescent	11
kinetics	11
muscle	11
ribosome	11
chaperonin	10
confinement	10
domain_swapping	10
protein-protein_interaction	10
a-beta	9
cell	9
dimerization	9
evolution	9
fret	9
strain	9
actin	8
em	8
enzyme	8
f1-atpase	8
for_ref	8
inhibitor	8
mc	8
pi	8
chaperone	7
groel	7
ligand	7
oligomer	7
single_molecule	7
channel	5
design	5
diffusion	5
entropy	5
fiber	5
function	5
lambdacro	5
mutant	5
physics	5
qmmm	5
xray-diffraction	5
dynein	4
free-energy	4
gene_expression	4
isoform	4
method	4
news-and-view	4
polymerization	4
prion	4
ref-pc	4
regulation	4
seca	4
visualization	4
aaa	3
adp	3
alignment	3
calorimetry	3
computation	3
ecology	3
in_vivo	3
microtubule	3
normal-mode	3
pattern_formation	3
processivity	3
sequence	3
2-heads	2
adaptation	2
adk	2
afm	2
atp	2
biology	2
chamical_reaction	2
circadeian	2
database	2
dynamics	2
ecoli	2
elastic-network	2
energetics	2
epr	2
filament	2
fluctuation	2
historical	2
homologue	2
interaction	2
lattice	2
nucleotide	2
pathway	2
prediction	2
protease	2
proteome	2
reaction	2
rnase_a	2
signal	2
statistical	2
stochastic	2
sup35	2
thermodynamics	2
trp	2
xray-scattering	2
aggregation	1
bioinformatics	1
brownian-dynamics	1
chaos	1
chemistry	1
cited	1
clpb	1
complex	1
correlation	1
dissociation	1
dna	1
dnak	1
dna-polymerase	1
domain	1
egfr	1
error	1
esr	1
estimate	1
fly-casting	1
foodweb	1
force	1
for_rev	1
fpt	1
frustration	1
fun	1
geometry	1
granular-material	1
growth	1
helicase	1
hybridization	1
hydration	1
inactivation	1
insulin	1
isomerize	1
language	1
light-chain	1
membrane	1
microglobulin	1
mine	1
modeling	1
molten_globule	1
mt	1
multi-basin	1
myosinv	1
nonequilibrium	1
o	1
packing	1
parasite	1
pca	1
phenotype	1
polar	1
population-dynamics	1
potential	1
preview	1
re	1
rna-polymerase	1
self_assembly	1
small	1
spin	1
splicing	1
stochastic_process	1
temperature	1
time_series	1
translocation	1
transport	1
unfolding	1

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