carlk's complexes [17 articles] Export

Recent papers added to carlk's library classified by the tag complexes. You can also see everyone's complexes.

	A Complex-based Reconstruction of the Saccharomyces cerevisiae Interactome [My Copy] Mol Cell Proteomics, Vol. 8, No. 6. (1 June 2009), pp. 1361-1381. by Haidong Wang, Boyko Kakaradov, Sean R. Collins, et al.Lena Karotki, Dorothea Fiedler, Michael Shales, Kevan M. Shokat, Tobias C. Walther, Nevan J. Krogan, Daphne Koller posted to yeast networks complexes complex by carlk on 2009-10-24 00:04:00 as along with 2 people ptrobajo anf
	Functional organization of the yeast proteome by systematic analysis of protein complexes [My Copy] Nature, Vol. 415, No. 6868. (10 January 2002), pp. 141-147. by Anne-Claude Gavin, Markus Bosche, Roland Krause, et al.Paola Grandi, Martina Marzioch, Andreas Bauer, Jorg Schultz, Jens M. Rick, Anne-Marie Michon, Cristina-Maria Cruciat, Marita Remor, Christian Hofert, Malgorzata Schelder, Miro Brajenovic, Heinz Ruffner, Alejandro Merino, Karin Klein, Manuela Hudak, David Dickson, Tatjana Rudi, Volker Gnau, Angela Bauch, Sonja Bastuck, Bettina Huhse, Christina Leutwein, Marie-Anne Heurtier, Richard R. Copley, Angela Edelmann, Erich Querfurth, Vladimir Rybin, Gerard Drewes, Manfred Raida, Tewis Bouwmeester, Peer Bork, Bertrand Seraphin, Bernhard Kuster, Gitte Neubauer, Giulio Superti-Furga posted to tap tandem_affinity_purification networks complexes by carlk on 2009-10-12 18:59:20 as along with 24 people and 2 groups aceol chica lawraga semin cerca taenneken adiel baaden dragonrez shivaram helenc lfriedl chad_davis balajis opheliav wnpx becarmson raiyar grahamc nicoleq iris_2001 csanford frohike ethkim kdl steinmetzlab
	Growing functional modules from a seed protein via integration of protein interaction and gene expression data [My Copy] BMC Bioinformatics, Vol. 8 (23 October 2007), 408. by Ioannis A. Maraziotis, Konstantina Dimitrakopoulou, Anastasios Bezerianos posted to networks moduledetection complexes complex clustering by carlk on 2009-10-10 00:26:05 as along with 3 people dragonrez jfr iris_2001
	ProCope - Protein Complex Prediction and Evaluation [My Copy] Bioinformatics (17 July 2008), btn376. by Jan Krumsiek, Caroline C. Friedel, Ralf Zimmer posted to ppi networks interaction complexes complex clustering by carlk on 2009-10-07 19:11:24 as along with 4 people saket zwang guhjy chad_davis
	Uncovering the overlapping community structure of complex networks in nature and society [My Copy] Nature, Vol. 435, No. 7043. (09 June 2005), pp. 814-818. by Gergely Palla, Imre Derenyi, Illes Farkas, Tamas Vicsek posted to protein overlapping networks complexes by carlk on 2009-10-07 19:10:11 as along with 19 people and 2 groups hendysh rst colmryan saket haewoon theshadowhost kuhn jfr lfriedl wilmegape gcalda ltabourier michaelmampaey Scis0000002 maralena lmichan ellakat tmmurali betaparticle kdl ADMiRes
	A complex-centric view of protein network evolution. [My Copy] Nucleic acids research, Vol. 37, No. 12. (1 July 2009), e88. by Nir Yosef, Martin Kupiec, Eytan Ruppin, Roded Sharan posted to protein ppi networks complexes complex by carlk on 2009-10-07 19:08:57 as along with 11 people and 1 group chica saket dakelley tomhebbron davidalee leemond31 druvus kiekyon neils tmmurali grahamc Orengo Group Journal Picks
	Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data. [My Copy] Journal of computational biology : a journal of computational molecular cell biology, Vol. 12, No. 6. (g 2005), pp. 835-846. by Roded Sharan, Trey Ideker, Brian Kelley, Ron Shamir, Richard M. Karp posted to yeast network complexes complex comparison alignment by carlk on 2009-09-10 18:23:17 as along with 3 people and 1 group chica okarsligil nuke2005 Bioinformatics
	Ultra-Fast Evaluation of Protein Energies Directly from Sequence [My Copy] PLoS Comput Biol, Vol. 2, No. 6. (16 June 2006), e63. by Gevorg Grigoryan, Fei Zhou, Steve R. Lustig, Gerbrand Ceder, Dane Morgan, Amy E. Keating posted to complex complexes energy structure by carlk on 2009-04-27 22:42:07 as along with 3 people kevinchannon wouterboomsma chgjb
	CFinder: locating cliques and overlapping modules in biological networks [My Copy] Bioinformatics, Vol. 22, No. 8. (15 April 2006), pp. 1021-1023. by Balazs Adamcsek, Gergely Palla, Illes J. Farkas, Imre Derenyi, Tamas Vicsek posted to complexes moduledetection modules networks by carlk on 2009-04-25 23:30:38 as along with 2 people lawraga ellakat
	Detection of functional modules from protein interaction networks [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 54, No. 1. (1 January 2004), pp. 49-57. by Jose B. Pereira-Leal, Anton J. Enright, Christos A. Ouzounis posted to complexes moduledetection modules networks by carlk on 2009-04-25 23:30:05 as along with 4 people saket ujh opheliav wnpx
	Macromolecular Modeling with Rosetta [My Copy] Annual Review of Biochemistry, Vol. 77, No. 1. (2008), pp. 363-382. by Rhiju Das, David Baker posted to complex complexes macromolecular review structure by carlk on 2009-04-17 15:28:06 as along with 10 people dgront bmduggan choonpeng mijam kgutwin phoenixzxl krapnik flbarroso saunders gisle
	CORUM: the comprehensive resource of mammalian protein complexes. [My Copy] Nucleic acids research, Vol. 36, No. Database issue. (11 January 2008), pp. D646-650. by Andreas Ruepp, Barbara Brauner, Irmtraud Dunger-Kaltenbach, et al.Goar Frishman, Corinna Montrone, Michael Stransky, Brigitte Waegele, Thorsten Schmidt, Octave Noubibou N. Doudieu, Volker Stümpflen, H. Werner Mewes posted to complex complexes databases by carlk on 2009-04-12 04:09:08 as along with 6 people dragonrez poirel tmmurali chad_davis guhjy shung
	Predicting co-complexed protein pairs from heterogeneous data. [My Copy] PLoS computational biology, Vol. 4, No. 4. (April 2008) by J. Qiu, W. S. Noble posted to complex complexes integration networks steiner by carlk on 2008-06-30 14:50:19 as along with 5 people guhjy roys bootsy mingzhi penpen926
	A "seed-refine" algorithm for detecting protein complexes from protein interaction data. [My Copy] IEEE transactions on nanobioscience, Vol. 6, No. 1. (March 2007), pp. 43-50. by P. Pei, A. Zhang posted to complex complexes networks steiner by carlk on 2008-06-17 03:46:53 as
	Discovering protein complexes in dense reliable neighborhoods of protein interaction networks. [My Copy] Computational systems bioinformatics / Life Sciences Society. Computational Systems Bioinformatics Conference, Vol. 6 (2007), pp. 157-168. by Xiao-Li L. Li, Chuan-Sheng S. Foo, See-Kiong K. Ng posted to complex complexes networks steiner by carlk on 2008-06-17 03:45:11 as
	A comprehensive set of protein complexes in yeast: mining large scale protein-protein interaction screens [My Copy] Bioinformatics, Vol. 19, No. 15. (12 October 2003), pp. 1901-1908. by Roland Krause, Christian von Mering, Peer Bork posted to complexes networks steiner by carlk on 2008-06-16 22:04:11 as
	Greedily building protein networks with confidence. [My Copy] Bioinformatics, Vol. 19, No. 15. (12 October 2003), pp. 1869-1874. by J. S. Bader posted to complexes networks steiner by carlk on 2008-06-12 18:24:48 as along with 2 people anf iris_2001

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networks	301
structure	71
protein	67
functionprediction	57
scp	51
algorithms	48
modules	46
databases	38
clustering	37
moduledetection	35
linkprediction	29
review	29
go	28
yeast	28
network	26
dynamics	20
complex	20
integration	18
alignment	17
complexes	17
tmpcite1	16
brain	16
disease	16
domains	14
ssl	13
evolution	13
ppi	12
steiner	12
diseaseppi	11
flu	11
expression	11
noise	10
comparison	10
signaling	10
motifs	9
regulation	9
genomics	8
experimental	7
modularity	7
rgrg	7
regulatory	7
doe	7
reassortment	6
metabolic	6
design	6
transcription	6
human	6
energy	6
fly	6
phylogeny	5
bicliques	5
search	5
population	5
visualization	5
theory	5
diseases	4
worm	4
pathways	4
interactions	4
metagenomics	4
interspecies	4
reviews	4
connectivity	3
influenza	3
model-based	3
machinelearning	3
bicriteria	3
decisiontrees	3
bacteria	3
1918	3
docking	3
hubs	3
assembly	3
graphtheory	3
pathogen	3
standard	2
kernels	2
ontology	2
crossspecies	2
local	2
community	2
simulated_data	2
interaction	2
historical	2
genetic	2
imaging	2
disorder	2
bad	2
scores	2
celegans	2
graph_theory	2
timemachine	2
protein_protein_interactions	2
overlapping	2
distance	2
graphs	1
geography	1
emap	1
termination	1
statistics	1
reliability_estmations	1
optimization	1
wiki	1
dense	1
tandem_affinity_purification	1
neighborhoods	1
tap	1
text_mining	1
domain	1
edgeweights	1
mouse	1
orthologs	1
yeast2hybrid	1
linkprediciton	1
homology	1
spatial	1
massspec	1
mcl	1
localized	1
virus	1
sequence	1
file-import-09-01-29	1
phylogenetics	1
foodweb	1
geometry	1
gas_vessicle	1
duplications	1
ranking	1
random_graphs	1
paleodiktyology	1
alzheimer	1
sat	1
macromolecular	1
detection	1
database	1
function	1
intereaction	1
clustering_algorithms	1
integrated_network	1
multicell	1
lattice	1

carlk's complexes [17 articles] Export

carlk's tags