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	Rational Extension of the Ribosome Biogenesis Pathway Using Network-Guided Genetics [My Copy] PLoS Biol, Vol. 7, No. 10. (6 October 2009), e1000213. by Zhihua Li, Insuk Lee, Emily Moradi, Nai-Jung Hung, Arlen W. Johnson, Edward M. Marcotte posted to network clustering by carlk on 2009-11-02 23:07:09 as along with 4 people tmmurali djkt lp2 ptrobajo
	Message-passing algorithms for the prediction of protein domain interactions from protein-protein interaction data [My Copy] Bioinformatics, Vol. 24, No. 18. (15 September 2008), pp. 2064-2070. by Mudassar Iqbal, Alex A. Freitas, Colin G. Johnson, Massimo Vergassola posted to networks network linkprediciton domain doe by carlk on 2009-10-24 00:06:57 as along with 6 people grahamc afon zwang reyez iris_2001 phoenixzxl
	STRING 8--a global view on proteins and their functional interactions in 630 organisms. [My Copy] Nucleic acids research, Vol. 37, No. Database issue. (1 January 2009), pp. D412-416. by Lars J. Jensen, Michael Kuhn, Manuel Stark, et al.Samuel Chaffron, Chris Creevey, Jean Muller, Tobias Doerks, Philippe Julien, Alexander Roth, Milan Simonovic, Peer Bork, Christian von Mering posted to networks network linkprediction doe database by carlk on 2009-10-24 00:06:28 as along with 16 people and 1 group dfdong mitko ilyashl hagechouchin443 lptolik kshameer allysonlister chad_davis larsjuhljensen druvus guhjy renatomilani grahamc behindtherabbit kgutwin biehl Bioinformatics
	Uncovering the rules for protein-protein interactions from yeast genomic data. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 10. (10 March 2009), pp. 3752-3757. by Jin Wang, Chunhe Li, Erkang Wang, Xidi Wang posted to yeast networks network linkprediction by carlk on 2009-10-24 00:05:32 as along with 8 people and 1 group guhjy AbnerCYH sobolevnrm mariap3636 mstumpf grahamc zwang phoenixzxl baker-group
	PRINCESS, a Protein Interaction Confidence Evaluation System with Multiple Data Sources [My Copy] Mol Cell Proteomics, Vol. 7, No. 6. (1 June 2008), pp. 1043-1052. by Dong Li, Wanlin Liu, Zhongyang Liu, et al.Jian Wang, Qijun Liu, Yunping Zhu, Fuchu He posted to network linkprediction doe by carlk on 2009-10-24 00:01:00 as along with 4 people anf guhjy kluck phoenixzxl
	AtPID: Arabidopsis thaliana protein interactome database an integrative platform for plant systems biology [My Copy] Nucl. Acids Res., Vol. 36, No. suppl_1. (11 January 2008), pp. D999-1008. by Jian Cui, Peng Li, Guang Li, et al.Feng Xu, Chen Zhao, Yuhua Li, Zhongnan Yang, Guang Wang, Qingbo Yu, Yixue Li, Tieliu Shi posted to networks network linkprediction doe databases by carlk on 2009-10-23 23:59:56 as along with 1 person cjeans
	Genetic and environmental influences on the size of specific brain regions in midlife: The VETSA MRI study [My Copy] NeuroImage (26 September 2009) by William S. Kremen, Elizabeth Prom-Wormley, Matthew S. Panizzon, et al.Lisa T. Eyler, Bruce Fischl, Michael C. Neale, Carol E. Franz, Michael J. Lyons, Jennifer Pacheco, Michele E. Perry posted to networks network brain by carlk on 2009-10-08 18:32:45 as
	How and when should interactome-derived clusters be used to predict functional modules and protein function? [My Copy] Bioinformatics In Bioinformatics, Vol. 25, No. 23. (1 December 2009), pp. 3143-3150. by Jimin Song, Mona Singh posted to network clustering_algorithms clustering by carlk on 2009-10-07 19:14:19 as along with 5 people and 1 group jperkins TRHvidsten grahamc jsuchit saket Orengo Group Journal Picks
	Disease candidate gene identification and prioritization using protein interaction networks [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 73. by Jing Chen, Bruce Aronow, Anil Jegga posted to ppi networks network diseaseppi disease by carlk on 2009-10-07 19:11:45 as along with 13 people and 1 group karthikraman zufar guhjy jfr daforerog saket provero mitko neils barriot grahamc renatomilani rjazwiec Bioinformatics
	Gene prioritization through genomic data fusion [My Copy] Nat Biotech, Vol. 24, No. 5. (05 May 2006), pp. 537-544. by Stein Aerts, Diether Lambrechts, Sunit Maity, et al.Peter Van Loo, Bert Coessens, Frederik De Smet, Leon-Charles Tranchevent, Bart De Moor, Peter Marynen, Bassem Hassan, Peter Carmeliet, Yves Moreau posted to ppi network integration diseases diseaseppi disease by carlk on 2009-10-07 19:10:42 as along with 11 people and 2 groups jandot daforerog saket jiny jfr balajis dchughes frohike winterschlaefer barriot srp33 G4ID Genetics-of-Gambling
	Network Analysis Tools: from biological networks to clusters and pathways [My Copy] Nature Protocols, Vol. 3, No. 10. (18 September 2008), pp. 1616-1629. by Sylvain Brohee, Karoline Faust, Gipsi Lima-Mendez, Gilles Vanderstocken, Jacques van Helden posted to review network clustering by carlk on 2009-10-03 00:43:57 as along with 9 people and 1 group mingzhi Stew daforerog pauldobson Zephyrus natstreet guhjy druvus dullhunk Bioinformatics - CRUK
	Sequence patches on MAPK surfaces define protein-protein interactions. [My Copy] Genome biology, Vol. 10, No. 6. (5 June 2009) by Gary L. Johnson, Shawn M. Gomez posted to protein_protein_interactions protein network linkprediction intereaction by carlk on 2009-10-03 00:42:03 as along with 1 person higueruelo
	A cell surface interaction network of neural leucine-rich repeat receptors. [My Copy] Genome biology, Vol. 10, No. 9. (18 September 2009), R99. by Christian Söllner, Gavin J. Wright posted to protein networks network by carlk on 2009-09-23 18:10:42 as along with 1 person grahamc
	Note on robust critical graphs with large odd girth [My Copy] Discrete Mathematics (19 April 2009) by E. Năstase, V. Rödl, M. Siggers posted to networks network graph_theory by carlk on 2009-09-19 18:15:13 as
	Assessing and combining reliability of protein interaction sources. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2007), pp. 433-444. by Sonia Leach, Aaron Gabow, Lawrence Hunter, Debra S. Goldberg posted to scores reliability_estmations network by carlk on 2009-09-14 18:41:57 as along with 2 people anf tmmurali
	Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data. [My Copy] Journal of computational biology : a journal of computational molecular cell biology, Vol. 12, No. 6. (g 2005), pp. 835-846. by Roded Sharan, Trey Ideker, Brian Kelley, Ron Shamir, Richard M. Karp posted to yeast network complexes complex comparison alignment by carlk on 2009-09-10 18:23:17 as along with 3 people and 1 group chica okarsligil nuke2005 Bioinformatics
	Module identification in bipartite and directed networks. [My Copy] Physical review. E, Statistical, nonlinear, and soft matter physics, Vol. 76, No. 3 Pt 2. (September 2007) by R. Guimerà, M. Sales-Pardo, L. A. Amaral posted to modularity modules network networks by carlk on 2009-06-10 19:53:09 as along with 1 person kubyaddi
	A Computational Framework for Ultrastructural Mapping of Neural Circuitry [My Copy] PLoS Biology, Vol. 7, No. 3. (1 March 2009), e74. by James R. Anderson, Bryan W. Jones, Jia-Hui Yang, et al.Marguerite V. Shaw, Carl B. Watt, Pavel Koshevoy, Joel Spaltenstein, Elizabeth Jurrus, Kannan Uv, Ross T. Whitaker, David Mastronarde, Tolga Tasdizen, Robert E. Marc posted to brain dynamics network networks by carlk on 2009-04-27 22:27:14 as
	Conserved patterns of protein interaction in multiple species. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 6. (8 February 2005), pp. 1974-1979. by Roded Sharan, Silpa Suthram, Ryan M. Kelley, et al.Tanja Kuhn, Scott McCuine, Peter Uetz, Taylor Sittler, Richard M. Karp, Trey Ideker posted to network linkprediction alignment by carlk on 2009-03-03 20:39:57 as along with 18 people and 2 groups chica kiekyon thegoose2 robfsouza tharris jiny sza dragonrez okarsligil balajis nuke2005 maryee gurkanbebek koller cjeans iris_2001 maralena mdstobbe C. elegans / WormBase Bioinformatics
	Discovering functional interaction patterns in protein-protein interaction networks [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Mehmet Turanalp, Tolga Can posted to functionprediction motifs network networks protein by carlk on 2009-02-24 16:38:10 as along with 6 people and 1 group cerca guhjy maralena Tingting renatomilani aprildh31 Proteasome
	Portraits of Complex Networks [My Copy] (28 Feb 2008) by J. P. Bagrow, E. M. Bollt, J. D. Skufca, D. ben-Avraham posted to algorithms network networks visualization by carlk on 2009-01-21 16:44:51 as along with 2 people saket jaspervoskuilen
	An in Vivo Map of the Yeast Protein Interactome [My Copy] Science, Vol. 320, No. 5882. (13 June 2008), pp. 1465-1470. by Kirill Tarassov, Vincent Messier, Christian R. Landry, et al.Stevo Radinovic, Mercedes M. Molina, Igor Shames, Yelena Malitskaya, Jackie Vogel, Howard Bussey, Stephen W. Michnick posted to databases network networks protein yeast by carlk on 2008-12-14 01:44:52 as along with 8 people semin roys ocs thomaskelder Petersarkies renatomilani zwang balicea
	A Hierarchy of Time-Scales and the Brain [My Copy] PLoS Comput Biol, Vol. 4, No. 11. (14 November 2008), e1000209. by Stefan J. Kiebel, Jean Daunizeau, Karl J. Friston posted to brain network by carlk on 2008-11-19 21:45:46 as along with 14 people flieder mmwoodman fbaroni bbuchsbaum rawphi markoffkin Borelli algorithmic fbarcelo svbcrypto nishiokov j-ito ocs DNAcombo
	Iterative approach to model identification of biological networks. [My Copy] BMC Bioinformatics, Vol. 6 (20 June 2005) by K. G. Gadkar, R. Gunawan, F. J. Doyle posted to dynamics network networks by carlk on 2008-10-19 21:54:39 as along with 3 people eweaver wnpx jrbanga
	Consistent dissection of the protein interaction network by combining global and local metrics [My Copy] Genome Biology, Vol. 8, No. 12. (21 December 2007), R271. by Chunlin Wang, Chris Ding, Qiaofeng Yang, Stephen Holbrook posted to moduledetection modules network tmpcite1 by carlk on 2008-06-14 19:46:34 as along with 3 people grahamc cjeans barriot
	Predicting protein functions from redundancies in large-scale protein interaction networks. [My Copy] Proc Natl Acad Sci U S A, Vol. 100, No. 22. (28 October 2003), pp. 12579-12583. by M. P. Samanta, S. Liang posted to functionprediction network tmpcite1 by carlk on 2008-06-12 22:38:20 as along with 2 people jiny wnpx

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carlk's network [26 articles] Export Sort

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