caseybrown's library 437 articles Export

	Genome-wide replication-independent histone H3 exchange occurs predominantly at promoters and implicates H3 K56 acetylation and Asf1. [My Copy] Molecular cell, Vol. 27, No. 3. (3 August 2007), pp. 393-405. by A. Rufiange, P. E. Jacques, W. Bhat, F. Robert, A. Nourani posted to h3k56ac hdac by caseybrown on 2009-05-30 15:26:23 as along with 1 person gderwin
	Rtt109 is required for proper H3K56 acetylation: a chromatin mark associated with the elongating RNA polymerase II. [My Copy] The Journal of biological chemistry, Vol. 281, No. 49. (8 December 2006), pp. 37270-37274. by J. Schneider, P. Bajwa, F. C. Johnson, S. R. Bhaumik, A. Shilatifard posted to h3k56ac hdac by caseybrown on 2009-05-30 15:24:59 as along with 1 person gderwin
	CBP/p300-mediated acetylation of histone H3 on lysine 56 [My Copy] Nature, Vol. 459, No. 7243. (7 May 2009), pp. 113-117. by Chandrima Das, M. Scott Lucia, Kirk C. Hansen, Jessica K. Tyler posted to hdac p300 by caseybrown on 2009-05-30 14:58:34 as along with 3 people fenghezi absterga inesdesantiago
	Acetylation in the globular core of histone H3 on lysine-56 promotes chromatin disassembly during transcriptional activation. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 26. (1 July 2008), pp. 9000-9005. by S. K. Williams, D. Truong, J. K. Tyler posted to hdac by caseybrown on 2009-05-30 14:54:56 as along with 1 person gderwin
	Histone H3 Methylation by Set2 Directs Deacetylation of Coding Regions by Rpd3S to Suppress Spurious Intragenic Transcription [My Copy] Cell, Vol. 123, No. 4. (18 November 2005), pp. 581-592. by Michael J. Carrozza, Bing Li, Laurence Florens, et al.Tamaki Suganuma, Selene K. Swanson, Kenneth K. Lee, Wei-Jong Shia, Scott Anderson, John Yates, Michael P. Washburn posted to hdac by caseybrown on 2009-05-29 22:02:55 as
	Dissecting the biological functions of Drosophila histone deacetylases by RNA interference and transcriptional profiling. [My Copy] J Biol Chem, Vol. 281, No. 26. (30 June 2006), pp. 17968-17976. by C. Foglietti, G. Filocamo, E. Cundari, et al.E. De Rinaldis, A. Lahm, R. Cortese, C. Steinkühler posted to hdac melanogaster by caseybrown on 2009-05-29 22:00:42 as along with 1 person gsrats
	Cis-regulatory variations: A study of SNPs around genes showing cis-linkage in segregating mouse populations [My Copy] BMC Genomics, Vol. 7 (15 September 2006), 235. by Debraj Guhathakurta, Tao Xie, Manish Anand, et al.Stephen W. Edwards, Guoya Li, Susana Wang, Eric E. Schadt posted to eqtl by caseybrown on 2009-05-25 23:33:49 as along with 4 people and 1 group maximilianh dpollard adepace natstreet EisenLab
	Most rare missense alleles are deleterious in humans: implications for complex disease and association studies. [My Copy] Am J Hum Genet, Vol. 80, No. 4. (April 2007), pp. 727-739. by G. V. Kryukov, L. A. Pennacchio, S. R. Sunyaev posted to rare_allele by caseybrown on 2009-05-23 19:25:50 as along with 2 people daforerog ramensky
	Variable Locus Length in the Human Genome Leads to Ascertainment Bias in Functional Inference For Noncoding Elements [My Copy] Bioinformatics (25 January 2009), btp043. by Leila Taher, Ivan Ovcharenko posted to go by caseybrown on 2009-05-23 19:25:29 as along with 2 people and 1 group daveGerrard djkt BergmanLab
	A survey of genetic human cortical gene expression. [My Copy] Nature genetics, Vol. 39, No. 12. (4 December 2007), pp. 1494-1499. by Amanda J. Myers, J. Raphael Gibbs, Jennifer A. Webster, et al.Kristen Rohrer, Alice Zhao, Lauren Marlowe, Mona Kaleem, Doris Leung, Leslie Bryden, Priti Nath, Victoria L. Zismann, Keta Joshipura, Matthew J. Huentelman, Diane Hu-Lince, Keith D. Coon, David W. Craig, John V. Pearson, Peter Holmans, Christopher B. Heward, Eric M. Reiman, Dietrich Stephan, John Hardy posted to brain eqtl by caseybrown on 2009-03-10 13:39:47 as along with 6 people daforerog vplagnol jeremymiller klo psique giovanni
	A genome-wide association study of global gene expression [My Copy] Nature Genetics, Vol. 39, No. 10. (16 September 2007), pp. 1202-1207. by Anna L. Dixon, Liming Liang, Miriam F. Moffatt, et al.Wei Chen, Simon Heath, Kenny C. C. Wong, Jenny Taylor, Edward Burnett, Ivo Gut, Martin Farrall, G. Mark Lathrop, Goncalo R. Abecasis, William O. C. Cookson posted to eqtl lcl by caseybrown on 2009-03-10 13:37:12 as along with 12 people daforerog turnersd tg150 xingxu gruberjd balicea rdiaz djkt vplagnol jo_davies mimulus_99 ptrobajo
	ChIP-seq accurately predicts tissue-specific activity of enhancers [My Copy] Nature, Vol. 457, No. 7231. (12 February 2009), pp. 854-858. by Axel Visel, Matthew J. Blow, Zirong Li, et al.Tao Zhang, Jennifer A. Akiyama, Amy Holt, Ingrid Plajzer-Frick, Malak Shoukry, Crystal Wright, Feng Chen, Veena Afzal, Bing Ren, Edward M. Rubin, Len A. Pennacchio posted to chip cisreg p300 short_read_analysis by caseybrown on 2009-02-12 22:08:49 as along with 22 people and 2 groups tonamswish ewilban1 samanthacooper ashkelon13 isimpson gdb dnewburger jochenG bertelsen oelemento rpatward cajunsushi WanderingAengus absterga provero cassj anphony dpollard biomcgary xingxu idonaldson djkt RockmanLab cis-regulatory-evolution
	Chromosomal Rearrangement Inferred From Comparisons of 12 Drosophila Genomes [My Copy] Genetics, Vol. 179, No. 3. (1 July 2008), pp. 1657-1680. by Arjun Bhutkar, Stephen W. Schaeffer, Susan M. Russo, Mu Xu, Temple F. Smith, William M. Gelbart posted to melanogaster synteny by caseybrown on 2009-02-10 02:24:15 as along with 2 people daveGerrard isimpson
	Ubiquitous selective constraints in the Drosophila genome revealed by a genome-wide interspecies comparison. [My Copy] Genome Res (2 June 2006) by Daniel L L. Halligan, Peter D D. Keightley posted to melanogaster molevol by caseybrown on 2009-02-09 13:40:30 as along with 7 people and 3 groups tkmaia RMGraze dpollard penka jri cisevol emptyhb EisenLab Nie cis-regulatory-evolution
	Genome-wide association study of plasma polyunsaturated fatty acids in the InCHIANTI Study. [My Copy] PLoS genetics, Vol. 5, No. 1. (January 2009) by T. Tanaka, J. Shen, G. R. Abecasis, et al.A. Kisialiou, J. M. Ordovas, J. M. Guralnik, A. Singleton, S. Bandinelli, A. Cherubini, D. Arnett, M. Y. Tsai, L. Ferrucci posted to gwas metabolism by caseybrown on 2009-02-07 20:51:03 as along with 1 person xingxu
	Polymorphism in the regulatory sequence of the human hsp70-1 gene does not affect heat shock factor binding or heat shock protein synthesis [My Copy] Cellular and Molecular Life Sciences (CMLS), Vol. 56, No. 7. (6 November 1999), pp. 701-708. by F. Favatier, M. R. Jacquier-Sarlin, E. Swierczewski, B. S. Polla posted to hsf lcl by caseybrown on 2009-02-06 19:35:25 as
	Accurate Discovery of Expression Quantitative Trait Loci Under Confounding From Spurious and Genuine Regulatory Hotspots [My Copy] Genetics, Vol. 180, No. 4. (1 December 2008), pp. 1909-1925. by Hyun M. Kang, Chun Ye, Eleazar Eskin posted to confounding_variables eqtl by caseybrown on 2009-02-06 14:00:39 as along with 3 people lp2 guhjy djkt
	Loci influencing lipid levels and coronary heart disease risk in 16 European population cohorts. [My Copy] Nature genetics, Vol. 41, No. 1. (7 January 2009), pp. 47-55. by Y. S. Aulchenko, S. Ripatti, I. Lindqvist, et al.D. Boomsma, I. M. Heid, P. P. Pramstaller, B. W. Penninx, A. C. Janssens, J. F. Wilson, T. Spector, N. G. Martin, N. L. Pedersen, K. O. Kyvik, J. Kaprio, A. Hofman, N. B. Freimer, M. R. Jarvelin, U. Gyllensten, H. Campbell, I. Rudan, A. Johansson, F. Marroni, C. Hayward, V. Vitart, I. Jonasson, C. Pattaro, A. Wright, N. Hastie, I. Pichler, A. A. Hicks, M. Falchi, G. Willemsen, J. J. Hottenga, E. J. de Geus, G. W. Montgomery, J. Whitfield, P. Magnusson, J. Saharinen, M. Perola, K. Silander, A. Isaacs, E. J. Sijbrands, A. G. Uitterlinden, J. C. Witteman, B. A. Oostra, P. Elliott, A. Ruokonen, C. Sabatti, C. Gieger, T. Meitinger, F. Kronenberg, A. Döring, H. E. Wichmann, J. H. Smit, M. I. McCarthy, C. M. van Duijn, L. Peltonen, posted to gwas heart_disease metabolism by caseybrown on 2009-02-06 13:59:18 as along with 2 people guhjy Terkko
	Nascent RNA Sequencing Reveals Widespread Pausing and Divergent Initiation at Human Promoters [My Copy] Science, Vol. 322, No. 5909. (19 December 2008), pp. 1845-1848. by Leighton J. Core, Joshua J. Waterfall, John T. Lis posted to antisense short_read_analysis transcription by caseybrown on 2009-02-06 13:58:20 as along with 13 people and 1 group hagechouchin443 gdb sebastien_vigneau bpcusack inesdesantiago skoch3 djkt strands Glires lp2 sandersl diaz0058 jbhiatt Koch_Lab
	Divergent transcription from active promoters. [My Copy] Science (New York, N.Y.), Vol. 322, No. 5909. (19 December 2008), pp. 1849-1851. by Amy C. Seila, J. Mauro Calabrese, Stuart S. Levine, et al.Gene W. Yeo, Peter B. Rahl, Ryan A. Flynn, Richard A. Young, Phillip A. Sharp posted to antisense short_read_analysis transcription by caseybrown on 2009-02-05 21:44:45 as along with 16 people guhjy gdb fenghezi tonamswish emptyhb siebert sebastien_vigneau inesdesantiago djkt jjray strands Glires lp2 sandersl diaz0058 jbhiatt
	High-resolution profiling of histone methylations in the human genome. [My Copy] Cell, Vol. 129, No. 4. (18 May 2007), pp. 823-837. by Artem Barski, Suresh Cuddapah, Kairong Cui, et al.Tae-Young Y. Roh, Dustin E. Schones, Zhibin Wang, Gang Wei, Iouri Chepelev, Keji Zhao posted to chromatin_domains short_read_analysis by caseybrown on 2009-01-30 16:42:36 as along with 22 people and 2 groups rsaito darian tonamswish stubrown fpattyn hagechouchin443 absterga ewilban1 suizifish jochenG raylim jernst giovenko guhjy kengg sebastien_vigneau jackjackjjj ghattem epigenetics ksha inesdesantiago dquest JLab Plantandetc
	Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains [My Copy] Genome Research, Vol. 19, No. 1. (January 2009), pp. 24-32. by Suresh Cuddapah, Raja Jothi, Dustin E. Schones, Tae-Young Roh, Kairong Cui, Keji Zhao posted to chromatin_domains ctcf h3k27me3 insulator by caseybrown on 2009-01-30 16:27:10 as along with 13 people and 1 group aprickett suizifish gdb fenghezi clearbluespring rschulz xingxu sebastien_vigneau cassj polivares inesdesantiago oelemento maximilianh CTCF
	Genome-wide analysis of Polycomb targets in Drosophila melanogaster [My Copy] Nature Genetics, Vol. 38, No. 6. (28 May 2006), pp. 700-705. by Yuri B. Schwartz, Tatyana G. Kahn, David A. Nix, et al.Xiao-Yong Li, Richard Bourgon, Mark Biggin, Vincenzo Pirrotta posted to chromatin h3k27me3 insulator melanogaster by caseybrown on 2009-01-30 16:14:25 as along with 5 people humburg farhat RMGraze eukfn elzodw
	BEAF Regulates Cell-Cycle Genes through the Controlled Deposition of H3K9 Methylation Marks into Its Conserved Dual-Core Binding Sites. [My Copy] PLoS biology, Vol. 6, No. 12. (23 December 2008) by Eldon Emberly, Roxane Blattes, Bernd Schuettengruber, et al.Magali Hennion, Nan Jiang, Craig M M. Hart, Emmanuel Käs, Olivier Cuvier posted to beaf insulator melanogaster by caseybrown on 2009-01-30 14:41:39 as along with 1 person sebastien_vigneau
	Analysis of the Vertebrate Insulator Protein CTCF-Binding Sites in the Human Genome [My Copy] Cell, Vol. 128, No. 6. (23 March 2007), pp. 1231-1245. by T. Kim, Z. Abdullaev, A. Smith, et al.K. Ching, D. Loukinov, R. Green, M. Zhang, V. Lobanenkov, B. Ren posted to chip ctcf insulator by caseybrown on 2009-01-29 20:40:20 as along with 6 people lusk suizifish clearbluespring sebastien_vigneau rschulz xingxu
	RNA Exosome Depletion Reveals Transcription Upstream of Active Human Promoters [My Copy] Science, Vol. 322, No. 5909. (19 December 2008), pp. 1851-1854. by Pascal Preker, Jesper Nielsen, Susanne Kammler, et al.Soren Lykke-Andersen, Marianne S. Christensen, Christophe K. Mapendano, Mikkel H. Schierup, Torben H. Jensen posted to 4th_floor_jc antisense expression_array non_coding_rna transcription by caseybrown on 2009-01-19 15:37:59 as along with 9 people and 1 group bartjacobse gdb bertelsen lflorez sebastien_vigneau djkt strands diaz0058 jbhiatt 4th_floor_JC
	A fast and flexible statistical model for large-scale population genotype data: applications to inferring missing genotypes and haplotypic phase. [My Copy] American journal of human genetics, Vol. 78, No. 4. (April 2006), pp. 629-644. by P. Scheet, M. Stephens posted to genotyping imputation by caseybrown on 2009-01-18 23:07:00 as along with 3 people and 1 group maren debasis vplagnol BioinfoCIPF
	The antisense transcriptomes of human cells. [My Copy] Science (New York, N.Y.), Vol. 322, No. 5909. (19 December 2008), pp. 1855-1857. by Yiping He, Bert Vogelstein, Victor E. Velculescu, Nickolas Papadopoulos, Kenneth W. Kinzler posted to 4th_floor_jc antisense sequencing short_read_analysis transcription by caseybrown on 2009-01-16 21:11:09 as along with 20 people and 2 groups rsaito guhjy gdb maximilianh xingxu hagechouchin443 jfr fhalbrit inesdesantiago skoch3 Zephyrus djkt strands balicea shikin coela ealloza diaz0058 gfliustu jbhiatt Koch_Lab Roswell Cancer Crosstalk
	A genome-wide scan for common genetic variants with a large influence on warfarin maintenance dose [My Copy] Blood, Vol. 112, No. 4. (15 August 2008), pp. 1022-1027. by Gregory M. Cooper, Julie A. Johnson, Taimour Y. Langaee, et al.Hua Feng, Ian B. Stanaway, Ute I. Schwarz, Marylyn D. Ritchie, Michael C. Stein, Dan M. Roden, Joshua D. Smith, David L. Veenstra, Allan E. Rettie, Mark J. Rieder posted to cyp drug_x_expression gwas pharmacogenetics vkorc1 by caseybrown on 2009-01-13 17:38:28 as
	Induction of Drug Metabolism: The Role of Nuclear Receptors [My Copy] Pharmacol Rev, Vol. 55, No. 4. (1 December 2003), pp. 649-673. by Christoph Handschin, Urs A. Meyer posted to drug_x_expression review by caseybrown on 2009-01-13 17:31:22 as along with 1 person yhkim
	The phenobarbital response enhancer module in the human bilirubin UDP-glucuronosyltransferase <I>UGT1A1</I> gene and regulation by the nuclear receptor CAR [My Copy] Hepatology, Vol. 33, No. 5. (2001), pp. 1232-1238. by Junko Sugatani, Hiroyuki Kojima, Akiko Ueda, et al.Satoru Kakizaki, Kouichi Yoshinari, Qi-Hui Gong, Ida S. Owens, Masahiko Negishi, Tatsuya Sueyoshi posted to barbiturate drug_x_expression pharmacogenetics ugt by caseybrown on 2009-01-13 17:29:10 as
	Study of the genetic determinants of UGT1A1 inducibility by phenobarbital in cultured human hepatocytes. [My Copy] Pharmacogenetics and genomics, Vol. 16, No. 2. (February 2006), pp. 79-86. by J. Ramírez, B. J. Komoroski, S. Mirkov, et al.A. Y. Graber, D. L. Fackenthal, E. G. Schuetz, S. Das, M. J. Ratain, F. Innocenti, S. C. Strom posted to barbiturate drug_x_expression pharmacogenetics ugt by caseybrown on 2009-01-13 17:22:57 as
	Genetic Variants in the UDP-glucuronosyltransferase 1A1 Gene Predict the Risk of Severe Neutropenia of Irinotecan [My Copy] J Clin Oncol, Vol. 22, No. 8. (15 April 2004), pp. 1382-1388. by Federico Innocenti, Samir D. Undevia, Lalitha Iyer, et al. Xian, Soma Das, Masha Kocherginsky, Theodore Karrison, Linda Janisch, Jacqueline Ramirez, Charles M. Rudin, Everett E. Vokes, Mark J. Ratain posted to irinotecan pharmacogenetics ugt by caseybrown on 2009-01-13 17:02:37 as
	Hepatocyte nuclear factor-1 alpha is associated with UGT1A1, UGT1A9 and UGT2B7 mRNA expression in human liver [My Copy] The Pharmacogenomics Journal, Vol. aop, No. current. by J. Ramírez, S. Mirkov, W. Zhang, et al.P. Chen, S. Das, W. Liu, M. J. Ratain, F. Innocenti posted to pharmacogenetics ugt by caseybrown on 2009-01-13 17:00:40 as
	Effect of VKORC1 Haplotypes on Transcriptional Regulation and Warfarin Dose [My Copy] N Engl J Med, Vol. 352, No. 22. (2 June 2005), pp. 2285-2293. by Mark J. Rieder, Alexander P. Reiner, Brian F. Gage, et al.Deborah A. Nickerson, Charles S. Eby, Howard L. Mcleod, David K. Blough, Kenneth E. Thummel, David L. Veenstra, Allan E. Rettie posted to pharmacogenetics vkorc1 by caseybrown on 2009-01-13 15:57:50 as along with 1 person lhsimmons
	Evolution of Regulatory Sequences in 12 Drosophila Species [My Copy] PLoS Genet, Vol. 5, No. 1. (January 2009), e1000330. by Jaebum Kim, Xin He, Saurabh Sinha posted to alignment cisreg melanogaster molevol by caseybrown on 2009-01-12 15:15:39 as along with 12 people and 3 groups daveGerrard kevinemamy dpollard druvus WanderingAengus JustinCrocker cisevol cajunsushi djkt emptyhb cabbagesofdoom Stew RockmanLab BergmanLab cis-regulatory-evolution
	Distinct Transcription Profiles of Primary and Secondary Glioblastoma Subgroups [My Copy] Cancer Res, Vol. 66, No. 1. (1 January 2006), pp. 159-167. by Cho-Lea Tso, William A. Freije, Allen Day, et al.Zugen Chen, Barry Merriman, Ally Perlina, Yohan Lee, Ederlyn Q. Dia, Koji Yoshimoto, Paul S. Mischel, Linda M. Liau, Timothy F. Cloughesy, Stanley F. Nelson posted to cancer glioblastoma transcription by caseybrown on 2009-01-09 16:51:06 as
	Marked Genomic Differences Characterize Primary and Secondary Glioblastoma Subtypes and Identify Two Distinct Molecular and Clinical Secondary Glioblastoma Entities [My Copy] Cancer Res, Vol. 66, No. 23. (1 December 2006), pp. 11502-11513. by Elizabeth A. Maher, Cameron Brennan, Patrick Y. Wen, et al.Laura Durso, Keith L. Ligon, Aaron Richardson, Deepak Khatry, Bin Feng, Raktim Sinha, David N. Louis, John Quackenbush, Peter M. Black, Lynda Chin, Ronald A. Depinho posted to cancer cnv glioblastoma by caseybrown on 2009-01-09 16:50:25 as along with 1 person chrisamiller
	Molecular determinants of the response of glioblastomas to EGFR kinase inhibitors. [My Copy] N Engl J Med, Vol. 353, No. 19. (10 November 2005), pp. 2012-2024. by I. K. Mellinghoff, M. Y. Wang, I. Vivanco, et al.D. A. Haas-Kogan, S. Zhu, E. Q. Dia, K. V. Lu, K. Yoshimoto, J. H. Huang, D. J. Chute, B. L. Riggs, S. Horvath, L. M. Liau, W. K. Cavenee, P. N. Rao, R. Beroukhim, T. C. Peck, J. C. Lee, W. R. Sellers, D. Stokoe, M. Prados, T. F. Cloughesy, C. L. Sawyers, P. S. Mischel posted to cancer glioblastoma sequencing by caseybrown on 2009-01-09 16:48:38 as along with 3 people and 1 group jackjackjjj giovanni pjasper GeschwindLab
	Genetic pathways to glioblastoma: a population-based study. [My Copy] Cancer research, Vol. 64, No. 19. (1 October 2004), pp. 6892-6899. by Hiroko Ohgaki, Pierre Dessen, Benjamin Jourde, et al.Sonja Horstmann, Tomofumi Nishikawa, Pier-Luigi L. Di Patre, Christoph Burkhard, Danielle Schüler, Nicole M. Probst-Hensch, Paulo César C. Maiorka, Nathalie Baeza, Paola Pisani, Yasuhiro Yonekawa, M. Gazi Yasargil, Urs M. Lütolf, Paul Kleihues posted to cancer glioblastoma sequencing by caseybrown on 2009-01-09 16:47:26 as along with 3 people smuekusc aezrin srp33
	PIK3CA Gene Mutations in Pediatric and Adult Glioblastoma Multiforme [My Copy] Mol Cancer Res, Vol. 4, No. 10. (1 October 2006), pp. 709-714. by Gary L. Gallia, Vikki Rand, I-Mei Siu, et al.Charles G. Eberhart, David C. James, Suely K. Marie, Sueli M. Oba-Shinjo, Carlos G. Carlotti, Otavia L. Caballero, Andrew J. Simpson, Malcolm V. Brock, Pierre P. Massion, Benjamin S. Carson, Gregory J. Riggins posted to cancer glioblastoma sequencing by caseybrown on 2009-01-09 16:43:38 as
	Sequence survey of receptor tyrosine kinases reveals mutations in glioblastomas [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 40. (4 October 2005), pp. 14344-14349. by Vikki Rand, Jiaqi Huang, Tim Stockwell, et al.Steve Ferriera, Oleksandr Buzko, Samuel Levy, Dana Busam, Kelvin Li, Jennifer B. Edwards, Charles Eberhart, Kathleen M. Murphy, Alexia Tsiamouri, Karen Beeson, Andrew J. Simpson, Craig J. Venter, Gregory J. Riggins, Robert L. Strausberg posted to glioblastoma sequencing by caseybrown on 2009-01-09 16:42:50 as
	An integrated genomic analysis of human glioblastoma multiforme. [My Copy] Science (New York, N.Y.), Vol. 321, No. 5897. (26 September 2008), pp. 1807-1812. by D. Williams Parsons, Siân Jones, Xiaosong Zhang, et al.Jimmy Cheng-Ho C. Lin, Rebecca J. Leary, Philipp Angenendt, Parminder Mankoo, Hannah Carter, I-Mei M. Siu, Gary L. Gallia, Alessandro Olivi, Roger McLendon, B. Ahmed Rasheed, Stephen Keir, Tatiana Nikolskaya, Yuri Nikolsky, Dana A. Busam, Hanna Tekleab, Luis A. Diaz, James Hartigan, Doug R. Smith, Robert L. Strausberg, Suely Kazue Nagahashi K. Marie, Sueli Mieko Oba M. Shinjo, Hai Yan, Gregory J. Riggins, Darell D. Bigner, Rachel Karchin, Nick Papadopoulos, Giovanni Parmigiani, Bert Vogelstein, Victor E. Velculescu, Kenneth W. Kinzler posted to cancer glioblastoma sequencing by caseybrown on 2009-01-09 16:41:26 as along with 15 people and 2 groups VGreiff stubrown Zephyrus zufar dolchan frohike wimufi jfr srp33 renatomilani brianb shikin aheilbut songpku giovenko GeneGo Roswell Cancer Crosstalk
	Analysis of mammalian gene batteries reveals both stable ancestral cores and highly dynamic regulatory sequences [My Copy] Genome Biology, Vol. 9 (16 December 2008), R172. by Laurence, Joachim Wittbrodt posted to cisreg coexpression molevol transcription by caseybrown on 2008-12-16 17:18:33 as along with 3 people and 1 group cisstem JeanSteJOLY cisevol cis-regulatory-evolution
	A Null Mutation in Human APOC3 Confers a Favorable Plasma Lipid Profile and Apparent Cardioprotection [My Copy] Science, Vol. 322, No. 5908. (12 December 2008), pp. 1702-1705. by Toni I. Pollin, Coleen M. Damcott, Haiqing Shen, et al.Sandra H. Ott, John Shelton, Richard B. Horenstein, Wendy Post, John C. Mclenithan, Lawrence F. Bielak, Patricia A. Peyser, Braxton D. Mitchell, Michael Miller, Jeffrey R. O'Connell, Alan R. Shuldiner posted to gwas heart_disease metabolism by caseybrown on 2008-12-12 01:03:57 as along with 2 people aung jessopher
	Empirical methods for controlling false positives and estimating confidence in ChIP-Seq peaks [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008), 523. by David Nix, Samir Courdy, Kenneth Boucher posted to chip sequencing short_read_analysis by caseybrown on 2008-12-05 17:20:19 as along with 9 people and 2 groups darian gdb slv23 inesdesantiago ewilban1 floatingpoint WanderingAengus magusina ghattem Bioinformatics - CRUK SIMR bioinformatics
	FitSNPs: highly differentially expressed genes are more likely to have variants associated with disease. [My Copy] Genome biology, Vol. 9, No. 12. (2008) by R. Chen, A. A. Morgan, J. Dudley, et al.T. Deshpande, L. Li, K. Kodama, A. P. Chiang, A. J. Butte posted to qtl transcription by caseybrown on 2008-12-05 13:27:58 as along with 9 people daforerog jfr brdwilde djkt Zephyrus renatomilani druvus natstreet gjoslyn
	Effects of cis and trans Genetic Ancestry on Gene Expression in African Americans [My Copy] PLoS Genet, Vol. 4, No. 12. (5 December 2008), e1000294. by Alkes L. Price, Nick Patterson, Dustin C. Hancks, et al.Simon Myers, David Reich, Vivian G. Cheung, Richard S. Spielman posted to eqtl lcl population_structure by caseybrown on 2008-12-05 13:13:26 as along with 6 people and 1 group JustinCrocker Zephyrus sg45653 xingxu shoshin djkt Roswell Cancer Crosstalk
	Practical issues in imputation-based association mapping. [My Copy] PLoS genetics, Vol. 4, No. 12. (5 December 2008), e1000279. by Yongtao Guan, Matthew Stephens posted to imputation qtl by caseybrown on 2008-12-05 13:10:12 as along with 9 people maren engelhardt guhjy druvus bertrandservin xingxu pkonings djkt jdbowes
	Dynamic Proteomics of Individual Cancer Cells in Response to a Drug [My Copy] Science, Vol. 322, No. 5907. (5 December 2008), pp. 1511-1516. by A. A. Cohen, N. Geva-Zatorsky, E. Eden, et al.M. Frenkel-Morgenstern, I. Issaeva, A. Sigal, R. Milo, C. Cohen-Saidon, Y. Liron, Z. Kam, L. Cohen, T. Danon, N. Perzov, U. Alon posted to cancer chemotherapy proteomics by caseybrown on 2008-12-05 01:53:54 as along with 14 people agonzale VGreiff tjchen myzhang brianb Borelli lflorez jessopher reyez jbhiatt winterschlaefer sjcockell renatomilani pengchy

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cisreg	82
eqtl	74
sequencing	62
gwas	52
transcription	48
cancer	41
molevol	41
method	39
polymorphism	37
metabolism	36
chip	35
expression_array	31
melanogaster	30
short_read_analysis	26
mouse	24
network	24
yeast	21
diabetes	19
cnv	14
liver	14
rna_seq	13
chromatin	12
pharmacogenetics	11
qtl	11
review	10
breast	9
lcl	9
mirna	9
genotyping	8
insulator	8
chromatin_domains	7
genetics	7
glioblastoma	7
multivariate	7
prostate	7
arabidopsis	6
barbiturate	6
colon	6
derm	6
hdac	6
rare_allele	6
simulans	6
cyp	5
genetic_interaction	5
gxe	5
promoter	5
splicing	5
worm	5
4th_floor_jc	4
antisense	4
car	4
ctcf	4
drug_x_expression	4
imputation	4
indel	4
nfkb	4
popgen	4
rat	4
translation	4
ugt	4
capture	3
histone_modification	3
lung	3
maize	3
mass_spec	3
pca	3
population_structure	3
stem_cell	3
454	2
alignment	2
database	2
es_cell	2
gene_duplication	2
h3k27me3	2
h3k56ac	2
heart_disease	2
lamin	2
nucleosome	2
p300	2
phylogeny	2
qtl_replication	2
solid	2
vkorc1	2
xenobiotic	2
allele_specific_expression	1
ancestry	1
ancient_dna	1
assembly	1
background_correction	1
bacteria	1
barley	1
beaf	1
bibliography	1
book	1
brain	1
chemotherapy	1
ciona	1
coexpression	1
confounding_variables	1
crohns	1
dnase_hypersensitivity	1
dog	1
ecoli	1
encode	1
fusion_gene	1
go	1
hapmap	1
hmm	1
hsf	1
irinotecan	1
leukemia	1
malaria	1
manova	1
multiplex	1
mutation	1
non_coding_rna	1
olfaction	1
pac_bio	1
polycomb	1
proteomics	1
pxr	1
recombination	1
regeneration	1
rnai	1
seq_images	1
sex	1
single_molecule	1
stat1	1
synteny	1
trans_splicing	1
visualization	1

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