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	Cis-regulatory variations: A study of SNPs around genes showing cis-linkage in segregating mouse populations [My Copy] BMC Genomics, Vol. 7 (15 September 2006), 235. by Debraj Guhathakurta, Tao Xie, Manish Anand, et al.Stephen W. Edwards, Guoya Li, Susana Wang, Eric E. Schadt posted to eqtl by caseybrown on 2009-05-25 23:33:49 as along with 4 people and 1 group maximilianh dpollard adepace natstreet EisenLab
	A survey of genetic human cortical gene expression. [My Copy] Nature genetics, Vol. 39, No. 12. (4 December 2007), pp. 1494-1499. by Amanda J. Myers, J. Raphael Gibbs, Jennifer A. Webster, et al.Kristen Rohrer, Alice Zhao, Lauren Marlowe, Mona Kaleem, Doris Leung, Leslie Bryden, Priti Nath, Victoria L. Zismann, Keta Joshipura, Matthew J. Huentelman, Diane Hu-Lince, Keith D. Coon, David W. Craig, John V. Pearson, Peter Holmans, Christopher B. Heward, Eric M. Reiman, Dietrich Stephan, John Hardy posted to brain eqtl by caseybrown on 2009-03-10 13:39:47 as along with 6 people daforerog vplagnol jeremymiller klo psique giovanni
	A genome-wide association study of global gene expression. [My Copy] Nature genetics, Vol. 39, No. 10. (16 October 2007), pp. 1202-1207. by Anna L. Dixon, Liming Liang, Miriam F. Moffatt, et al.Wei Chen, Simon Heath, Kenny C. Wong, Jenny Taylor, Edward Burnett, Ivo Gut, Martin Farrall, G. Mark Lathrop, Gonçalo R. Abecasis, William O. Cookson posted to eqtl lcl by caseybrown on 2009-03-10 13:37:12 as along with 13 people songpku daforerog turnersd tg150 xingxu gruberjd balicea rdiaz djkt vplagnol jo_davies mimulus_99 ptrobajo
	Accurate Discovery of Expression Quantitative Trait Loci Under Confounding From Spurious and Genuine Regulatory Hotspots [My Copy] Genetics, Vol. 180, No. 4. (1 December 2008), pp. 1909-1925. by Hyun M. Kang, Chun Ye, Eleazar Eskin posted to confounding_variables eqtl by caseybrown on 2009-02-06 14:00:39 as along with 3 people lp2 guhjy djkt
	Effects of cis and trans Genetic Ancestry on Gene Expression in African Americans [My Copy] PLoS Genet, Vol. 4, No. 12. (5 December 2008), e1000294. by Alkes L. Price, Nick Patterson, Dustin C. Hancks, et al.Simon Myers, David Reich, Vivian G. Cheung, Richard S. Spielman posted to eqtl lcl population_structure by caseybrown on 2008-12-05 13:13:26 as along with 6 people and 1 group JustinCrocker Zephyrus sg45653 xingxu shoshin djkt Roswell Cancer Crosstalk
	Modifier effects between regulatory and protein-coding variation. [My Copy] PLoS genetics, Vol. 4, No. 10. (31 October 2008), e1000244. by Antigone S. Dimas, Barbara E. Stranger, Claude Beazley, et al.Robert D. Finn, Catherine E. Ingle, Matthew S. Forrest, Matthew E. Ritchie, Panos Deloukas, Simon Tavaré, Emmanouil T. Dermitzakis posted to allele_specific_expression eqtl genetic_interaction hapmap lcl by caseybrown on 2008-10-31 16:00:45 as along with 3 people daforerog renewang inesdesantiago
	Genetical genomics: spotlight on QTL hotspots. [My Copy] PLoS genetics, Vol. 4, No. 10. (24 October 2008), e1000232. by R. Breitling, Y. Li, B. M. Tesson, et al.J. Fu, C. Wu, T. Wiltshire, A. Gerrits, L. V. Bystrykh, G. de Haan, A. I. Su, R. C. Jansen posted to eqtl review by caseybrown on 2008-10-24 15:27:18 as along with 6 people guhjy xingxu lp2 natstreet druvus djkt
	High-Resolution Mapping of Expression-QTLs Yields Insight into Human Gene Regulation [My Copy] PLoS Genet, Vol. 4, No. 10. (10 October 2008), e1000214. by Jean-Baptiste Veyrieras, Sridhar Kudaravalli, Su Y. Kim, et al.Emmanouil T. Dermitzakis, Yoav Gilad, Matthew Stephens, Jonathan K. Pritchard posted to eqtl lcl by caseybrown on 2008-10-20 15:13:32 as along with 10 people provero shikin sameersoi athma guhjy bertrandservin xingxu lp2 larbiza djkt
	Regulatory Hotspots in the Malaria Parasite Genome Dictate Transcriptional Variation [My Copy] PLoS Biology, Vol. 6, No. 9. (1 September 2008), e238. by Joseph M. Gonzales, Jigar J. Patel, Napawan Ponmee, et al.Lei Jiang, Asako Tan, Steven P. Maher, Stefan Wuchty, Pradipsinh K. Rathod, Michael T. Ferdig posted to eqtl malaria by caseybrown on 2008-10-08 03:31:40 as along with 3 people arider1 semrich djkt
	Considering dependence among genes and markers for false discovery control in eQTL mapping. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 18. (15 September 2008), pp. 2015-2022. by L. Chen, T. Tong, H. Zhao posted to eqtl by caseybrown on 2008-09-24 02:54:09 as along with 3 people djkt guhjy orzenil
	Discovery of expression QTLs using large-scale transcriptional profiling in human lymphocytes. [My Copy] Nature genetics, Vol. 39, No. 10. (October 2007), pp. 1208-1216. by Harald H. Göring, Joanne E. Curran, Matthew P. Johnson, et al.Thomas D. Dyer, Jac Charlesworth, Shelley A. Cole, Jeremy B. Jowett, Lawrence J. Abraham, David L. Rainwater, Anthony G. Comuzzie, Michael C. Mahaney, Laura Almasy, Jean W. MacCluer, Ahmed H. Kissebah, Gregory R. Collier, Eric K. Moses, John Blangero posted to eqtl by caseybrown on 2008-09-11 03:25:45 as along with 5 people nicholso vplagnol giovanni jo_davies guhjy
	Genetics of gene expression surveyed in maize, mouse and man [My Copy] Nature, Vol. 422, No. 6929. (20 March 2003), pp. 297-302. by Eric E. Schadt, Stephanie A. Monks, Thomas A. Drake, et al.Aldons J. Lusis, Nam Che, Veronica Colinayo, Thomas G. Ruff, Stephen B. Milligan, John R. Lamb, Guy Cavet, Peter S. Linsley, Mao Mao, Roland B. Stoughton, Stephen H. Friend posted to eqtl maize mouse by caseybrown on 2008-08-18 02:24:42 as along with 10 people and 1 group provero ajbattle roys adepace koller lp2 hms jo_davies parkcc mcgannd EisenLab
	Cis-acting expression quantitative trait loci in mice [My Copy] Genome Research, Vol. 15, No. 5. (1 May 2005), pp. 681-691. by Sudheer Doss, Eric E. Schadt, Thomas A. Drake, Aldons J. Lusis posted to eqtl mouse by caseybrown on 2008-08-18 02:19:38 as
	eQTL Viewer: visualizing how sequence variation affects genome-wide transcription [My Copy] BMC Bioinformatics, Vol. 8 (09 January 2007), 7. by Wei Zou, David L. Aylor, Zhao-Bang Zeng posted to eqtl visualization by caseybrown on 2008-08-18 00:07:50 as along with 2 people guhjy Ayest
	SNPs matter: impact on detection of differential expression [My Copy] Nat Meth, Vol. 4, No. 9. (2007), pp. 679-680. by Nicole A. Walter, Shannon K. Mcweeney, Sandra T. Peters, John K. Belknap, Robert Hitzemann, Kari J. Buck posted to eqtl expression_array polymorphism by caseybrown on 2008-08-17 23:49:48 as along with 1 person and 1 group hms Bioinformatics
	Effect of polymorphisms within probe-target sequences on olignonucleotide microarray experiments [My Copy] Nucl. Acids Res., Vol. 36, No. 13. (1 August 2008), pp. 4417-4423. by David Benovoy, Tony Kwan, Jacek Majewski posted to cisreg eqtl expression_array polymorphism transcription by caseybrown on 2008-08-16 15:37:23 as along with 3 people waszak jfr GeeSharpMinor
	High-Resolution Mapping of Gene Expression Using Association in an Outbred Mouse Stock [My Copy] PLoS Genet, Vol. 4, No. 8. (2008), e1000149. by Anatole Ghazalpour, Sudheer Doss, Hyun Kang, et al.Charles Farber, Ping-Zi Wen, Alec Brozell, Ruth Castellanos, Eleazar Eskin, Desmond J. Smith, Thomas A. Drake, Aldons J. Lusis posted to eqtl liver mouse by caseybrown on 2008-08-08 14:12:39 as along with 2 people natstreet ptrobajo
	How replicable are mRNA expression QTL? [My Copy] Mammalian Genome, Vol. 17, No. 6. (1 June 2006), pp. 643-656. by Jeremy Peirce, Hongqiang Li, Jintao Wang, et al.Kenneth Manly, Robert Hitzemann, John Belknap, Glenn Rosen, Shirlean Goodwin, Thomas Sutter, Robert Williams, Lu Lu posted to eqtl qtl_replication by caseybrown on 2008-07-25 23:17:33 as
	Sequence polymorphisms cause many false cis eQTLs. [My Copy] PloS one, Vol. 2, No. 7. (2007) by R. Alberts, P. Terpstra, Y. Li, R. Breitling, J. P. Nap, R. C. Jansen posted to eqtl polymorphism by caseybrown on 2008-07-25 23:14:18 as along with 3 people guhjy qfwills natstreet
	Gene expression quantitative trait locus analysis of 16000 barley genes reveals a complex pattern of genome-wide transcriptional regulation [My Copy] The Plant Journal, Vol. 53, No. 1. (January 2008), pp. 90-101. by Potokina, Elena, Druka, et al. Arnis, Luo, Zewei, Wise, Roger, Waugh, Robbie, Kearsey, Mike posted to barley eqtl by caseybrown on 2008-07-25 23:04:09 as
	Summary of contributions to GAW15 Group 16: Processing/normalization of expression traits [My Copy] Genetic Epidemiology, Vol. 31, No. S1. (2007), pp. S132-S138. by Aurélie Labbe, Jeanette Mcclintick, Maria Martinez, On posted to eqtl expression_array method by caseybrown on 2008-07-25 23:01:44 as
	Rapid and robust association mapping of expression quantitative trait loci. [My Copy] BMC proceedings, Vol. 1 Suppl 1, No. Suppl 1. (2007) by A. C. Lam, M. Schouten, Y. S. Aulchenko, C. S. Haley, D. J. de Koning posted to eqtl by caseybrown on 2008-07-25 23:00:25 as along with 1 person guhjy
	A method dealing with a large number of correlated traits in a linkage genome scan [My Copy] BMC Proceedings, Vol. 1, No. Suppl 1. (2007) by Tao Feng, Shuanglin Zhang, Qiuying Sha posted to eqtl multivariate by caseybrown on 2008-07-25 22:54:33 as
	Linkage analysis using principal components of gene expression data [My Copy] BMC Proceedings, Vol. 1, No. Suppl 1. (2007) by Elizabeth Atkinson, Brooke Fridley, Ellen Goode, et al.Shannon Mcdonnell, Wen L. Mares, Kari Rabe, Zhifu Sun, Susan Slager, Mariza de Andrade posted to eqtl multivariate by caseybrown on 2008-07-25 22:53:31 as
	Linkage and association analyses of principal components in expression data [My Copy] BMC Proceedings, Vol. 1, No. Suppl 1. (2007) by Anthony Hinrichs, Robert Culverhouse, Carol Jin, Brian Suarez posted to eqtl multivariate by caseybrown on 2008-07-25 22:50:47 as
	Impact of gene expression data pre-processing on expression quantitative trait locus mapping. [My Copy] BMC proceedings, Vol. 1 Suppl 1, No. Suppl 1. (2007) by A. Labbe, M. P. Roth, P. H. Carmichael, M. Martinez posted to eqtl expression_array by caseybrown on 2008-07-25 22:44:56 as along with 2 people guhjy sameersoi
	Revealing the architecture of gene regulation: the promise of eQTL studies [My Copy] Trends in Genetics, Vol. 24, No. 8. (August 2008), pp. 408-415. by Y. Gilad, S. Rifkin, J. Pritchard posted to eqtl review by caseybrown on 2008-07-25 22:32:28 as along with 7 people sameersoi athma emptyhb djkt guhjy tmmurali orzenil
	Genetical genomics: use all data [My Copy] BMC Genomics, Vol. 8, No. 1. (12 March 2007), 69. by Miguel P. Enciso, Jose Quevedo, Antonio Bahamonde posted to eqtl by caseybrown on 2008-07-25 21:34:06 as along with 6 people daforerog ccots Ayest qfwills steff83 jo_davies
	Genetic complexity and quantitative trait loci mapping of yeast morphological traits. [My Copy] PLoS Genet, Vol. 3, No. 2. (23 February 2007) by S. Nogami, Y. Ohya, G. Yvert posted to eqtl qtl yeast by caseybrown on 2008-07-25 21:26:56 as along with 4 people and 1 group JoeBanks bpcusack dpollard guhjy EisenLab
	Genetic analysis of genome-wide variation in human gene expression. [My Copy] Nature, Vol. 430, No. 7001. (12 August 2004), pp. 743-747. by Michael Morley, Cliona M. Molony, Teresa M. Weber, et al.James L. Devlin, Kathryn G. Ewens, Richard S. Spielman, Vivian G. Cheung posted to eqtl by caseybrown on 2008-07-25 21:13:41 as along with 13 people and 1 group owenlancaster ajbattle athma provero snuppepuppan kentsis RMGraze adepace qfwills vplagnol nagendraproj jo_davies mimulus_99 EisenLab
	Causal inference of regulator-target pairs by gene mapping of expression phenotypes [My Copy] BMC Genomics, Vol. 7, No. 1. (2006), 125. by David Kulp, Manjunatha Jagalur posted to eqtl by caseybrown on 2008-07-25 21:02:48 as along with 4 people ajbattle roys Borelli dipenps
	Trait-trait dynamic interaction: 2D-trait eQTL mapping for genetic variation study [My Copy] BMC Genomics, Vol. 9, No. 1. (2008) by Wei Sun, Shinsheng Yuan, Ker C. Li posted to eqtl multivariate yeast by caseybrown on 2008-07-25 19:43:49 as along with 4 people and 1 group natstreet ddunbar stajich guhjy Mycology
	Identification of genetic variants contributing to cisplatin-induced cytotoxicity by use of a genomewide approach. [My Copy] Am J Hum Genet, Vol. 81, No. 3. (September 2007), pp. 427-437. by R. S. Huang, S. Duan, S. J. Shukla, et al.E. O. Kistner, T. A. Clark, T. X. Chen, A. C. Schweitzer, J. E. Blume, M. E. Dolan posted to eqtl pharmacogenetics by caseybrown on 2008-07-25 19:39:23 as along with 2 people nicholso guhjy
	A genome-wide association study identifies protein quantitative trait loci (pQTLs). [My Copy] PLoS genetics, Vol. 4, No. 5. (May 2008) by D. Melzer, J. R. Perry, D. Hernandez, et al.A. M. Corsi, K. Stevens, I. Rafferty, F. Lauretani, A. Murray, J. R. Gibbs, G. Paolisso, S. Rafiq, J. Simon-Sanchez, H. Lango, S. Scholz, M. N. Weedon, S. Arepalli, N. Rice, N. Washecka, A. Hurst, A. Britton, W. Henley, J. van de Leemput, R. Li, A. B. Newman, G. Tranah, T. Harris, V. Panicker, C. Dayan, A. Bennett, M. I. McCarthy, A. Ruokonen, M. R. Jarvelin, J. Guralnik, S. Bandinelli, T. M. Frayling, A. Singleton, L. Ferrucci posted to eqtl metabolism by caseybrown on 2008-07-25 19:10:17 as along with 5 people xingxu jo_davies natstreet guhjy srp33
	A statistical framework for expression quantitative trait loci mapping. [My Copy] Genetics, Vol. 177, No. 2. (29 October 2007), pp. 761-771. by M. Chen, C. Kendziorski posted to eqtl by caseybrown on 2008-07-22 16:11:25 as along with 4 people guhjy sameersoi natstreet jo_davies
	Accounting for Non-Genetic Factors Improves the Power of eQTL Studies [My Copy] RECOMB (2008) by Oliver Stegle, Anitha Kanna, Richard Durbin, John Winn posted to eqtl by caseybrown on 2008-07-17 13:40:05 as
	Calibrating the Performance of SNP Arrays for Whole-Genome Association Studies [My Copy] PLoS Genet, Vol. 4, No. 6. (27 June 2008), e1000109. by Ke Hao, Eric E. Schadt, John D. Storey posted to eqtl genotyping gwas by caseybrown on 2008-06-30 01:42:03 as along with 6 people noushin jfr brianb Stew balicea guhjy
	A Genome-Wide Gene Expression Signature of Environmental Geography in Leukocytes of Moroccan Amazighs [My Copy] PLoS Genet, Vol. 4, No. 4. (11 April 2008), e1000052. by Youssef Idaghdour, John D. Storey, Sami J. Jadallah, Greg Gibson posted to eqtl gxe by caseybrown on 2008-06-19 18:44:35 as along with 1 person misonneh
	Gene Set Enrichment in eQTL Data Identifies Novel Annotations and Pathway Regulators [My Copy] PLoS Genet, Vol. 4, No. 5. (9 May 2008), e1000070. by Chunlei Wu, David L. Delano, Nico Mitro, et al.Stephen V. Su, Jeff Janes, Phillip McClurg, Serge Batalov, Genevieve L. Welch, Jie Zhang, Anthony P. Orth, John R. Walker, Richard J. Glynne, Michael P. Cooke, Joseph S. Takahashi, Kazuhiro Shimomura, Akira Kohsaka, Joseph Bass, Enrique Saez, Tim Wiltshire, Andrew I. Su posted to eqtl network by caseybrown on 2008-06-17 21:30:12 as along with 4 people ajbattle icecrown thomaskelder guhjy
	The influence of genetic variation on gene expression. [My Copy] Genome research In Genome Research, Vol. 17, No. 12. (1 December 2007), pp. 1707-1716. by Rohan B. Williams, Eva K. Chan, Mark J. Cowley, Peter F. Little posted to eqtl by caseybrown on 2008-06-12 21:30:04 as along with 8 people buyske engelhardt balicea giovanni ggorjan lp2 xingxu dmachugh
	Mapping the Genetic Architecture of Gene Expression in Human Liver [My Copy] PLoS Biol, Vol. 6, No. 5. (6 May 2008), e107. by Eric E. Schadt, Cliona Molony, Eugene Chudin, et al.Ke Hao, Xia Yang, Pek Y. Lum, Andrew Kasarskis, Bin Zhang, Susanna Wang, Christine Suver, Jun Zhu, Joshua Millstein, Solveig Sieberts, John Lamb, Debraj GuhaThakurta, Jonathan Derry, John D. Storey, Iliana Avila-Campillo, Mark J. Kruger, Jason M. Johnson, Carol A. Rohl, Atila van Nas, Margarete Mehrabian, Thomas A. Drake, Aldons J. Lusis, Ryan C. Smith, F. Peter Guengerich, Stephen C. Strom, Erin Schuetz, Thomas H. Rushmore, Roger Ulrich posted to eqtl liver metabolism by caseybrown on 2008-05-27 16:23:37 as along with 16 people kshameer CameronNeylon nicholso greg roys Borelli athma lawraga semrich ddunbar vplagnol Schmidtc ptrobajo Jonesy guhjy hdopazo
	Mapping gene expression quantitative trait loci by singular value decomposition and independent component analysis [My Copy] BMC Bioinformatics, Vol. 9 (20 May 2008), 244. by Shameek Biswas, John D. Storey, Joshua M. Akey posted to eqtl method by caseybrown on 2008-05-27 15:02:38 as along with 2 people sameersoi guhjy
	Distribution and functional impact of DNA copy number variation in the rat [My Copy] Nat Genet, Vol. 40, No. 5. (May 2008), pp. 538-545. by Victor Guryev, Kathrin Saar, Tatjana Adamovic, et al.Mark Verheul, Sebastiaan A. van Heesch, Stuart Cook, Michal Pravenec, Timothy Aitman, Howard Jacob, James D. Shull, Norbert Hubner, Edwin Cuppen posted to cnv eqtl rat by caseybrown on 2008-04-28 22:53:46 as along with 1 person booker
	Statistical power of expression quantitative trait loci for mapping of complex trait loci in natural populations. [My Copy] Genetics, Vol. 178, No. 4. (1 April 2008), pp. 2201-2216. by P. Schliekelman posted to eqtl by caseybrown on 2008-04-26 14:29:50 as along with 5 people daforerog sameersoi maren guhjy lp2
	Genome-wide scan reveals that genetic variation for transcriptional plasticity in yeast is biased towards multi-copy and dispensable genes. [My Copy] Gene, Vol. 366, No. 2. (1 February 2006), pp. 343-351. by C. R. Landry, J. Oh, D. L. Hartl, D. Cavalieri posted to eqtl gxe yeast by caseybrown on 2008-04-15 20:02:35 as along with 4 people and 1 group jbsaltz dpollard aubinhon klo EisenLab
	The landscape of genetic complexity across 5,700 gene expression traits in yeast [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 5. (1 February 2005), pp. 1572-1577. by Rachel B. Brem, Leonid Kruglyak posted to eqtl genetic_interaction yeast by caseybrown on 2008-04-15 20:01:15 as along with 5 people ajbattle qfwills djkt lp2 jo_davies
	Gene–Environment Interaction in Yeast Gene Expression [My Copy] PLoS Biology, Vol. 6, No. 4. (1 April 2008), e83. by Erin N. Smith, Leonid Kruglyak posted to cisreg eqtl yeast by caseybrown on 2008-04-15 16:17:59 as along with 1 person dbensasson
	An integrative genomics approach to infer causal associations between gene expression and disease. [My Copy] Nature genetics, Vol. 37, No. 7. (19 July 2005), pp. 710-717. by Eric E. Schadt, John Lamb, Xia Yang, et al.Jun Zhu, Steve Edwards, Debraj Guhathakurta, Solveig K. Sieberts, Stephanie Monks, Marc Reitman, Chunsheng Zhang, Pek Yee Y. Lum, Amy Leonardson, Rolf Thieringer, Joseph M. Metzger, Liming Yang, John Castle, Haoyuan Zhu, Shera F. Kash, Thomas A. Drake, Alan Sachs, Aldons J. Lusis posted to eqtl network by caseybrown on 2008-03-30 23:04:55 as along with 18 people and 1 group frohike mnishimu roys nicholso lawraga ocs pcahan1 tuck brant ckehl koller giovanni lp2 dejori natstreet jo_davies chrisamiller mitko GeschwindLab
	Elucidating the murine brain transcriptional network in a segregating mouse population to identify core functional modules for obesity and diabetes [My Copy] Journal of Neurochemistry, Vol. 97, No. s1. (15 March 2006), pp. 50-62. by Pek Y. Lum, Yanqing Chen, Jun Zhu, et al.John Lamb, Shlomo Melmed, Susanna Wang, Tom A. Drake, Aldons J. Lusis, Eric E. Schadt posted to diabetes eqtl metabolism mouse network by caseybrown on 2008-03-30 22:50:22 as along with 2 people biomcgary ccots
	Variations in DNA elucidate molecular networks that cause disease. [My Copy] Nature, Vol. 452, No. 7186. (27 March 2008), pp. 429-435. by Yanqing Chen, Jun Zhu, Pek Yee Y. Lum, et al.Xia Yang, Shirly Pinto, Douglas J. MacNeil, Chunsheng Zhang, John Lamb, Stephen Edwards, Solveig K. Sieberts, Amy Leonardson, Lawrence W. Castellini, Susanna Wang, Marie-France F. Champy, Bin Zhang, Valur Emilsson, Sudheer Doss, Anatole Ghazalpour, Steve Horvath, Thomas A. Drake, Aldons J. Lusis, Eric E. Schadt posted to diabetes eqtl liver metabolism mouse network by caseybrown on 2008-03-30 18:41:47 as along with 22 people and 2 groups mnishimu Zephyrus biomcgary daforerog roys druvus nicklynch semrich brianb jbsaltz djkt raiyar lp2 jo_davies shikin ptrobajo guhjy echinotrix natstreet sanchezbuelna jfr chrisamiller 4th_floor_JC GeneGo

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