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	A Method for High-Throughput Gene Expression Signature Analysis [My Copy] Genome Biology, Vol. 7 (19 July 2006), R61. by David Peck, Emily D. Crawford, Kenneth N. Ross, Kimberly Stegmaier, Todd R. Golub, Justin Lamb posted to expression gene high-throughput ht-gep by ccots on 2009-03-04 00:23:45 as along with 2 people jfr vplagnol
	Genetic basis of individual differences in the response to small-molecule drugs in yeast. [My Copy] Nat Genet (4 March 2007) by Ethan O O. Perlstein, Douglas M M. Ruderfer, David C C. Roberts, Stuart L L. Schreiber, Leonid Kruglyak posted to chembio expression yeast by ccots on 2007-03-06 15:32:16 as along with 2 people lp2 caseybrown
	Robustness can evolve gradually in complex regulatory gene networks with varying topology. [My Copy] PLoS computational biology, Vol. 3, No. 2. (2 February 2007), e15. by S. Ciliberti, O. C. Martin, A. Wagner posted to evolution expression graph network regulatory topology by ccots on 2007-03-06 01:21:57 as along with 17 people and 4 groups chica biomcgary kaarsinogen eldan indigoviolet emilyhare entropy nickluscombe aswin kengg dolhuis timflutre grahamc shigepong kynn carneiro phoenixzxl EisenLab EBI-regulation SNE Plantandetc
	Meta-analysis for microarray studies of the genetics of complex traits. [My Copy] Trends in biotechnology, Vol. 25, No. 2. (February 2007), pp. 45-47. by Michael F. Miles, Robert W. Williams posted to data data-integration eqtl expression metaanalysis mouse review by ccots on 2007-03-06 01:18:04 as along with 1 person daforerog
	Multivariate regression analysis of distance matrices for testing associations between gene expression patterns and related variables [My Copy] Proceedings of the National Academy of Sciences, Vol. 103, No. 51. (19 December 2006), pp. 19430-19435. by Matthew A. Zapala, Nicholas J. Schork posted to analysis clustering data expression methods by ccots on 2007-03-06 01:16:38 as
	DNA variation and brain-region specific expression profiles show different relationships between inbred mouse strains: implications for eQTL mapping studies [My Copy] Genome Biology, Vol. 8 (26 February 2007), R25. by Iiris Hovatta, Matthew A. Zapala, Ron S. Broide, et al.Eric E. Schadt, Ondrej Libiger, Nicholas J. Schork, David J. Lockhart, Carrolee Barlow posted to brain eqtl expression mouse by ccots on 2007-03-06 01:13:01 as along with 1 person jeremymiller
	A DNA methylation–based switch generates bistable gene expression [My Copy] Nature Genetics, Vol. 39, No. 2., pp. 146-147. by Matthew R. Bennett, Jeff Hasty posted to ecoli expression regulation switch by ccots on 2007-02-21 22:43:40 as along with 1 person cambray
	Quantitative trait transcripts for nicotine resistance in Drosophila melanogaster. [My Copy] Nature genetics, Vol. 39, No. 2. (21 February 2007), pp. 264-268. by Gisele Passador-Gurgel, Wen-Ping P. Hsieh, Priscilla Hunt, Nigel Deighton, Greg Gibson posted to data-integration drosophila expression network pharmacogenetics qtl by ccots on 2007-02-21 22:41:41 as along with 1 person daforerog
	Peripheral blood gene expression signature mirrors central nervous system disease: the model of multiple sclerosis. [My Copy] Autoimmun Rev, Vol. 5, No. 8. (October 2006), pp. 517-522. by A. Achiron, M. Gurevich posted to disease expression review specificity tissue by ccots on 2007-02-21 17:43:00 as along with 1 person and 1 group jeremymiller GeschwindLab
	Allele-Specific KRT1 Expression Is a Complex Trait [My Copy] PLoS Genetics, Vol. 2, No. 6. (1 June 2006), e93. by Heng Tao, David R. Cox, Kelly A. Frazer posted to cis-elements expression variation by ccots on 2006-06-30 18:19:35 as along with 4 people and 1 group RMGraze emarker mimulus_99 dpollard RockmanLab
	Inverse gene expression patterns for macrophage activating hepatotoxicants and peroxisome proliferators in rat liver. [My Copy] Biochem Pharmacol, Vol. 67, No. 11. (1 June 2004), pp. 2141-2165. by M. McMillian, A. Y. Nie, J. B. Parker, et al.A. Leone, M. Kemmerer, S. Bryant, J. Herlich, L. Yieh, A. Bittner, X. Liu, J. Wan, M. D. Johnson posted to expression specificity tissue toxicology by ccots on 2006-06-26 23:15:49 as
	Development of a toxicogenomics invitro assay for the efficient characterization of compounds [My Copy] Pharmacogenomics, Vol. 7, No. 2. (March 2006), pp. 177-186. by Yang, Yi, Abel, et al.J. Stephen, Ciurlionis, Rita, Waring, F. Jeffrey posted to assay expression platform toxicogenomics by ccots on 2006-06-26 23:14:45 as along with 1 person jdiggans
	Unique gene expression patterns in liver and kidney associated with exposure to chemical toxicants. [My Copy] J Pharmacol Exp Ther, Vol. 297, No. 3. (June 2001), pp. 895-905. by M. J. Bartosiewicz, D. Jenkins, S. Penn, J. Emery, A. Buckpitt posted to arrays expression homeostasis toxicology by ccots on 2006-06-26 23:10:11 as
	Endophenotypes for psychiatric disorders: ready for primetime? [My Copy] Trends in Genetics, Vol. 22, No. 6. (June 2006), pp. 306-313. by Carrie E. Bearden, Nelson B. Freimer posted to experimental expression homo phenotype by ccots on 2006-06-05 18:07:50 as
	Association Studies: A genome-wide association approach to mapping the genetic determinants of the transcriptome in human populations [My Copy] European Journal of Human Genetics, Vol. aop, No. current. by Eric E. Schadt, posted to eqtl expression mapping transcriptome by ccots on 2006-05-26 18:49:28 as along with 1 person and 1 group giovanni GeschwindLab
	Genetic regulators of large-scale transcriptional signatures in cancer. [My Copy] Nature genetics, Vol. 38, No. 4. (05 April 2006), pp. 421-430. by Adam S. Adler, Meihong Lin, Hugo Horlings, Dimitry S. Nuyten, Marc J. van de Vijver, Howard Y. Chang posted to cancer disease expression by ccots on 2006-04-27 21:19:26 as along with 7 people frohike rdiaz huiminC jfr tuck Ao_Li2007 oelemento
	Stochasticity in gene expression: from theories to phenotypes [My Copy] Nature Reviews Genetics, Vol. 6, No. 6. (10 May 2005), pp. 451-464. by Mads Kaern, Timothy C. Elston, William J. Blake, James J. Collins posted to expression noise stochastic by ccots on 2006-04-27 17:11:20 as along with 9 people dbikard pkm bertelsen boko4ikameto bcondon wnpx tabu balabu timflutre
	Analysis of SNP-Expression Association Matrices. [My Copy] Proc IEEE Comput Syst Bioinform Conf (2005), pp. 135-143. by A. Tsalenko, R. Sharan, H. Edvardsen, et al.V. Kristensen, A. L. Børresen-Dale, A. Ben-Dor, Z. Yakhini posted to expression mapping qtl by ccots on 2006-04-05 16:05:13 as
	Stochastic protein expression in individual cells at the single molecule level [My Copy] Nature, Vol. 440, No. 7082. (16 March 2006), pp. 358-362. by Long Cai, Nir Friedman, X. Sunney Xie posted to detection expression methods noise protein by ccots on 2006-04-05 16:04:30 as along with 18 people and 1 group citemyface pkm dbikard abhishek_tiwari ddcttrl peiell okarsligil bayesian wnpx balabu cottrell jiyu mmt jtaylor margaritis cjeans austin jjray Bioinformatics
	Elucidating the murine brain transcriptional network in a segregating mouse population to identify core functional modules for obesity and diabetes [My Copy] Journal of Neurochemistry, Vol. 97, No. s1. (15 March 2006), pp. 50-62. by Pek Y. Lum, Yanqing Chen, Jun Zhu, et al.John Lamb, Shlomo Melmed, Susanna Wang, Tom A. Drake, Aldons J. Lusis, Eric E. Schadt posted to expression gg mouse phenotype qtl by ccots on 2006-04-05 16:02:06 as along with 2 people biomcgary caseybrown
	Combined Expression Trait Correlations and Expression Quantitative Trait Locus Mapping. [My Copy] PLoS Genet, Vol. 2, No. 1. (20 January 2006) by Hong Lan, Meng Chen, Jessica B B. Flowers, et al.Brian S S. Yandell, Donnie S S. Stapleton, Christine M M. Mata, Eric Ton-Keen T. Mui, Matthew T T. Flowers, Kathryn L L. Schueler, Kenneth F F. Manly, Robert W W. Williams, Christina Kendziorski, Alan D D. Attie posted to expression gg methods qtl by ccots on 2006-04-05 15:59:52 as along with 1 person djkt
	Statistical methods for expression quantitative trait loci (eQTL) mapping. [My Copy] Biometrics, Vol. 62, No. 1. (March 2006), pp. 19-27. by C. M. Kendziorski, M. Chen, M. Yuan, H. Lan, A. D. Attie posted to expression gg mapping methods qtl by ccots on 2006-04-05 15:59:25 as along with 4 people guhjy BrianTomasik natstreet jo_davies
	Clustering gene expression data using a graph-theoretic approach: an application of minimum spanning trees. [My Copy] Bioinformatics, Vol. 18, No. 4. (April 2002), pp. 536-545. by Y. Xu, V. Olman, D. Xu posted to expression graph methods network by ccots on 2006-04-05 15:57:36 as along with 3 people jiny dps giorgiofotia
	Genetic and Genomic Analysis of a Fat Mass Trait with Complex Inheritance Reveals Marked Sex Specificity. [My Copy] PLoS Genet, Vol. 2, No. 2. (3 February 2006) by Susanna Wang, Nadir Yehya, Eric E E. Schadt, Hui Wang, Thomas A A. Drake, Aldons J J. Lusis posted to expression gg mouse phenotype qtl sex by ccots on 2006-04-05 15:56:15 as
	Discovering functional relationships between RNA expression and chemotherapeutic susceptibility using relevance networks. [My Copy] Proc Natl Acad Sci U S A, Vol. 97, No. 22. (24 October 2000), pp. 12182-12186. by A. J. Butte, P. Tamayo, D. Slonim, T. R. Golub, I. S. Kohane posted to expression network pharmacogenetics by ccots on 2006-04-05 15:51:51 as along with 3 people cswinburne nolodie dragonrez
	Tumor classification using phylogenetic methods on expression data. [My Copy] J Theor Biol, Vol. 228, No. 4. (21 June 2004), pp. 477-496. by R. Desper, J. Khan, A. A. Schäffer posted to expression phylogenetics by ccots on 2006-04-05 15:47:40 as along with 1 person archroad
	Expression profiling in primates reveals a rapid evolution of human transcription factors. [My Copy] Nature, Vol. 440, No. 7081. (9 March 2006), pp. 242-245. by Yoav Gilad, Alicia Oshlack, Gordon K. Smyth, Terence P. Speed, Kevin P. White posted to evolution expression homo pan tf by ccots on 2006-04-05 15:46:00 as along with 17 people and 4 groups gderwin athma stevanspringer eckart_bindewald dchughes tabu nirfriedman nickluscombe ranb johncumbers djkt nicg mikaelhuss JeffR100 candypmcg emarker emptyhb FAB-lab G4ID EBI-regulation Genetics-of-Gambling
	An extensive network of coupling among gene expression machines [My Copy] Nature, Vol. 416, No. 6880. (2002), pp. 499-506. by T. Maniatis, R. Reed posted to expression mechanisms transcription by ccots on 2006-02-08 20:40:11 as
	Mapping determinants of variation in energy metabolism, respiration and flight in Drosophila [My Copy] Genetics, Vol. 165, No. 2. (2003), pp. 623-635. by K. L. Montooth, J. H. Marden, A. G. Clark posted to drosophila expression genetic mapping variation by ccots on 2006-02-08 20:40:10 as
	limma: Linear Models for Microarray Data User's Guide [My Copy] (2004) by G. K. Smyth, N. Thorne, J. Wettenhall posted to diffexp expression method rpack by ccots on 2006-02-08 20:40:10 as
	The functional landscape of mouse gene expression [My Copy] J Biol, Vol. 3, No. 5. (2004), pp. 21-21. by W. Zhang, Q. D. Morris, R. Chang, et al.O. Shai, M. A. Bakowski, N. Mitsakakis, N. Mohammad, M. D. Robinson, R. Zirngibl, E. Somogyi, N. Laurin, E. Eftekharpour, E. Sat, J. Grigull, Q. Pan, W. T. Peng, N. Krogan, J. Greenblatt, M. Fehlings, D. van der Kooy, J. Aubin, B. G. Bruneau, J. Rossant, B. J. Blencowe, B. J. Frey, T. R. Hughes posted to expression mouse variation by ccots on 2006-02-08 20:40:10 as
	Trans-acting regulatory variation in Saccharomyces cerevisiae and the role of transcription factors. [My Copy] Nat Genet, Vol. 35, No. 1. (2003), pp. 57-64. by G. Yvert, R. B. Brem, J. Whittle, et al.J. M. Akey, E. Foss, E. N. Smith, R. Mackelprang, L. Kruglyak posted to expression gg profiling yeast by ccots on 2006-02-08 20:40:10 as
	Allelic variations in gene expression [My Copy] Curr Opin Oncol, Vol. 16, No. 1. (2004), pp. 39-43. by H. Yan, W. Zhou posted to expression gg review variation by ccots on 2006-02-08 20:40:10 as
	Small changes in expression affect predisposition to tumorigenesis. [My Copy] Nat Genet, Vol. 30, No. 1. (2002), pp. 25-6. by H. Yan, Z. Dobbie, S. B. Gruber, et al.S. Markowitz, K. Romans, F. M. Giardiello, K. W. Kinzler, B. Vogelstein posted to disease expression susceptibility variation by ccots on 2006-02-08 20:40:10 as
	Allelic variation in human gene expression [My Copy] Science, Vol. 297, No. 5584. (2002), pp. 1143-1143. by H. Yan, W. Yuan, V. E. Velculescu, B. Vogelstein, K. W. Kinzler posted to allelic-discrimination expression homo variation by ccots on 2006-02-08 20:40:10 as
	Genome-wide transcriptome mapping analysis identifies organ-specific gene expression patterns along human chromosomes [My Copy] Genomics, Vol. 84, No. 5. (2004), pp. 867-875. by T. Yamashita, M. Honda, H. Takatori, R. Nishino, N. Hoshino, S. Kaneko posted to expression gg homo profiling specificity tissue transcriptome by ccots on 2006-02-08 20:40:10 as
	The Evolution of transcriptional regulation in eukaryotes. [My Copy] Mol. Biol. Evol., Vol. 20 (2003), pp. 1377-1419. by G. A. Wray, M. W. Hahn, E. Abouheif, et al.J. P. Balhoff, M. Pizer, M. V. Rockman, L. A. Romano posted to evolution expression genetic regulation review variation by ccots on 2006-02-08 20:40:10 as
	Assessing gene expression variation in normal human tissues using GeneTag, a novel, global, sensitive profiling method [My Copy] J Biotechnol, Vol. 101, No. 3. (2003), pp. 199-217. by L. Y. Wong, A. Hafeman, V. L. Boyd, et al.J. Bodeau, K. D. Lazaruk, S. N. Liew, P. Casey, V. Belonogoff, S. Bit, C. Sumner, A. Bredo, N. Ho, E. Chu, S. Olson, S. Rabkin, S. Maltchenko, G. Spier, D. Gilbert, S. Baumhueter posted to expression homo variation by ccots on 2006-02-08 20:40:10 as
	Evolutionary changes in cis and trans gene regulation [My Copy] Nature, Vol. 430, No. 6995. (2004), pp. 85-88. by P. J. Wittkopp, B. K. Haerum, A. G. Clark posted to drosophila evolution expression genetic gg mapping variation by ccots on 2006-02-08 20:40:10 as
	What good is genomic imprinting: the function of parent-specific gene expression [My Copy] Nat Rev Genet, Vol. 4, No. 5. (2003), pp. 359-368. by J. F. Wilkins, D. Haig posted to expression imprinting variation by ccots on 2006-02-08 20:40:10 as
	Variation in tissue-specific gene expression among natural populations [My Copy] Genome Biol, Vol. 6, No. 2. (2005) by A. Whitehead, D. L. Crawford posted to expression fish gg specificity tissue variation by ccots on 2006-02-08 20:40:10 as
	Serial analysis of gene expression [My Copy] Science, Vol. 270, No. 5235. (1995), pp. 484-487. by V. E. Velculescu, L. Zhang, B. Vogelstein, K. W. Kinzler posted to expression methods profiling by ccots on 2006-02-08 20:40:10 as
	Population genetic variation in genome-wide gene expression [My Copy] Mol Biol Evol, Vol. 20, No. 6. (2003), pp. 955-963. by J. P. Townsend, D. Cavalieri, D. L. Hartl posted to expression gg population variation by ccots on 2006-02-08 20:40:10 as
	Transcriptional regulation of Alzheimer's disease genes: implications for susceptibility [My Copy] Hum Mol Genet, Vol. 9, No. 16. (2000), pp. 2383-2394. by J. Theuns, C. Van Broeckhoven posted to disease expression homo regulation transcription by ccots on 2006-02-08 20:40:10 as
	Multiple locus linkage analysis of genomewide expression in yeast [My Copy] PLoS Biology, Vol. 3, No. 8. (2005) by J. D. Storey, J. M. Akey, L. Kruglyak posted to arrays expression gg mapping methods variation yeast by ccots on 2006-02-08 20:40:10 as
	Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization [My Copy] Mol Biol Cell, Vol. 9, No. 12. (1998), pp. 3273-3297. by P. T. Spellman, G. Sherlock, M. Q. Zhang, et al.V. R. Iyer, K. Anders, M. B. Eisen, P. O. Brown, D. Botstein, B. Futcher posted to expression regulation yeast by ccots on 2006-02-08 20:40:10 as
	Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications [My Copy] Proc Natl Acad Sci U S A, Vol. 98, No. 19. (2001), pp. 10869-10874. by T. Sorlie, Cm Perou, R. Tibshirani, et al.T. Aas, S. Geisler, H. Johnsen, T. Hastie, Mb Eisen, M. van de Rijn, Ss Jeffrey, T. Thorsen, H. Quist, Jc Matese, Po Brown, D. Botstein, Eystein P. Lonning, Al Borresen-Dale posted to cancer disease expression profiling by ccots on 2006-02-08 20:40:10 as
	Functional discovery via a compendium of expression profiles [My Copy] Cell, Vol. 102, No. 1. (2000), pp. 109-126. by T. R. Hughes, M. J. Marton, A. R. Jones, et al.C. J. Roberts, R. Stoughton, C. D. Armour, H. A. Bennett, E. Coffey, H. Dai, Y. D. He, M. J. Kidd, A. M. King, M. R. Meyer, D. Slade, P. Y. Lum, S. B. Stepaniants, D. D. Shoemaker, D. Gachotte, K. Chakraburtty, J. Simon, M. Bard, S. H. Friend posted to expression variation yeast by ccots on 2006-02-08 20:40:10 as
	An integrative genomics approach to infer causal associations between gene expression and disease [My Copy] Nat Genet, Vol. 37, No. 7. (2005), pp. 710-717. by E. E. Schadt, J. Lamb, X. Yang, et al.J. Zhu, S. Edwards, D. Guhathakurta, S. K. Sieberts, S. Monks, M. Reitman, C. Zhang, P. Y. Lum, A. Leonardson, R. Thieringer, J. M. Metzger, L. Yang, J. Castle, H. Zhu, S. F. Kash, T. A. Drake, A. Sachs, A. J. Lusis posted to disease expression gg mapping method profiling variant by ccots on 2006-02-08 20:40:10 as
	Genetics of gene expression surveyed in maize, mouse and man [My Copy] Nature, Vol. 422, No. 6929. (2003), pp. 297-302. by E. E. Schadt, S. A. Monks, T. A. Drake, et al.A. J. Lusis, N. Che, V. Colinayo, T. G. Ruff, S. B. Milligan, J. R. Lamb, G. Cavet, P. S. Linsley, M. Mao, R. B. Stoughton, S. H. Friend posted to expression gg mapping mouse variation by ccots on 2006-02-08 20:40:10 as

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expression	110
variation	102
arrays	72
methods	65
mouse	50
genetic	47
regulation	46
homo	37
network	37
tissue	31
gg	30
mapping	28
transcription	27
statistics	27
evolution	27
disease	27
toxicogenomics	26
model	24
vivo	23
vitro	23
review	22
genome	21
qtl	21
normalisation	20
yeast	17
phenotype	17
eqtl	17
commentary	14
method	13
hh	13
diffexp	13
evodevo	13
background	12
cancer	11
ppi	10
profiling	10
artefacts	8
toxicology	8
specificity	8
allelic-discrimination	7
drosophila	7
smooth	7
history	6
genetics	6
pan	6
transcriptome	6
signalling	6
behaviour	6
rat	6
bcc	5
population	5
pca	5
tf	5
resources	5
modifier	5
species	5
pharmacogenetics	4
analysis	4
structure	4
interld	4
graph	4
hapmap	4
snp	4
data	4
svd	3
oss	3
drug	3
polymorphism	3
diversity	3
fish	3
noise	3
proteome	3
proteomics	3
cis-elements	3
binf	3
origins	3
plants	2
complexity	2
morphometrics	2
linguistics	2
crosstalk	2
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indel	1
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intelligence	1
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imprinting	1
comparison	1
function	1
toxgeno	1
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switch	1
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information	1
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hypothesis	1
heritability	1
db	1
literature	1
geno-pheno	1
mpss	1
paleontology	1
uvr	1

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