chad_davis's validation [24 articles] Export

Recent papers added to chad_davis's library classified by the tag validation. You can also see everyone's validation.

	The meaning of alignment: lessons from structural diversity [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Walter Pirovano, Anton K. Feenstra, Jaap Heringa posted to alignment evolution structure validation by chad_davis on 2008-12-27 18:35:07 as along with 13 people pimmy swtimmer dimka mhamada reyez treangen markusd j3xucite nuin kshameer druvus taguchi pansapiens
	Age-Dependent Evolution of the Yeast Protein Interaction Network Suggests a Limited Role of Gene Duplication and Divergence [My Copy] PLoS Comput Biol, Vol. 4, No. 11. (28 November 2008), e1000232. by Wan K. Kim, Edward M. Marcotte posted to complexes evolution networks ppi proj_assembly proj_interprets statistics validation by chad_davis on 2008-12-19 09:35:41 as along with 7 people wangbo dakelley biomcgary cabbagesofdoom grahamc bpcusack tmmurali
	Residue contact-count potentials are as effective as residue-residue contact-type potentials for ranking protein decoys. [My Copy] BMC structural biology, Vol. 8 (08 December 2008), 53. by Dan M. Bolser, Ioannis Filippis, Henning Stehr, Jose Duarte, Michael Lappe posted to algorithm binding feature_selection ppi proj_interprets statistics structure validation by chad_davis on 2008-12-18 20:51:09 as along with 3 people tcschen RamuAnandakrishnan krapnik
	Inferring protein domain interactions from databases of interacting proteins. [My Copy] Genome Biol, Vol. 6, No. 10. (2005) by R. Riley, C. Lee, C. Sabatti, D. Eisenberg posted to algorithm binding ppi proj_assembly proj_interprets statistics structure validation by chad_davis on 2008-10-20 12:49:20 as along with 4 people maryee j3xucite iris_2001 phoenixzxl
	A comparison of MSA tools. [My Copy] Bioinformation, Vol. 2, No. 10. (2008), pp. 452-455. by N. Essoussi, K. Boujenfa, M. Limam posted to algorithm alignment proj_assembly proj_interprets review validation by chad_davis on 2008-10-20 11:14:46 as along with 1 person jwm
	In different organisms, the mode of interaction between two signaling proteins is not necessarily conserved. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 32. (10 August 2004), pp. 11646-11651. by S. Y. Park, B. D. Beel, M. I. Simon, A. M. Bilwes, B. R. Crane posted to binding evolution proj_interprets structure validation by chad_davis on 2008-09-17 16:56:13 as along with 3 people chica bicko RebeccaHamer
	The C1C2: a framework for simultaneous model selection and assessment. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (2008) by Martin Eklund, Ola Spjuth, Jarl Wikberg posted to algorithm classification feature_selection proj_stabperf statistics validation by chad_davis on 2008-09-02 12:38:06 as along with 2 people guhjy nuin
	A comprehensive comparison of random forests and support vector machines for microarray-based cancer classification [My Copy] BMC Bioinformatics, Vol. 9 (22 July 2008), 319. by Alexander Statnikov, Lily Wang, Constantin F. Aliferis posted to classification microarray proj_stabperf review statistics validation by chad_davis on 2008-08-06 15:45:40 as along with 5 people ucbcjbm rdiaz jfr rmk mdharsee
	Inference of macromolecular assemblies from crystalline state. [My Copy] Journal of molecular biology, Vol. 372, No. 3. (21 September 2007), pp. 774-797. by E. Krissinel, K. Henrick posted to algorithm annotation complexes database embl proj_assembly structure validation binding service by chad_davis on 2008-07-13 16:28:44 as along with 3 people marti rico bicko
	Statistical Analysis of Interface Similarity in Crystals of Homologous Proteins. [My Copy] Journal of molecular biology (7 June 2008) by Qifang Xu, Adrian A. A. Canutescu, Guoli Wang, Maxim Shapovalov, Zoran Obradovic, Roland L. L. Dunbrack posted to complexes database data_integration evolution proj_interprets structure validation binding by chad_davis on 2008-07-06 20:22:42 as along with 4 people robfsouza svozil kintoki bicko
	A new protein linear motif benchmark for multiple sequence alignment software. [My Copy] BMC bioinformatics, Vol. 9 (25 April 2008), 213. by Emmanuel Perrodou, Claudia Chica, Olivier Poch, Toby J. Gibson, Julie D. Thompson posted to alignment disorder embl review validation by chad_davis on 2008-05-04 10:10:39 as along with 3 people chica niallhaslam biehl
	Where have all the interactions gone? Estimating the coverage of two-hybrid protein interaction maps. [My Copy] PLoS computational biology, Vol. 3, No. 11. (1 November 2007), e214. by Hailiang Huang, Bruno M. Jedynak, Joel S. Bader posted to review statistics validation yeast binding by chad_davis on 2008-01-08 09:55:53 as along with 4 people guhjy cjeans zwang Ema
	What's wrong with Bonferroni adjustments. [My Copy] BMJ (Clinical research ed.), Vol. 316, No. 7139. (18 April 1998), pp. 1236-1238. by T. V. Perneger posted to proj_credo proj_disocons review statistics validation by chad_davis on 2007-11-20 13:01:43 as along with 5 people and 1 group heliopais VGreiff Zephyrus ucbcjbm StephenWeigand Statistical Methods sans Jargon
	Protein-Protein Docking Benchmark 2.0: an update. [My Copy] Proteins, Vol. 60, No. 2. (1 August 2005), pp. 214-216. by J. Mintseris, K. Wiehe, B. Pierce, et al.R. Anderson, R. Chen, J. Janin, Z. Weng posted to database docking structure validation binding by chad_davis on 2007-09-30 16:30:25 as along with 9 people marti aqeel julianm bicko ima bluvsh1 selrac Iainios boris_aguilar
	Coverage and error models of protein-protein interaction data by directed graph analysis [My Copy] Genome Biology, Vol. 8 (10 September 2007), R186. by Tony Chiang, Denise Scholtens, Deepayan Sarkar, Robert Gentleman, Wolfgang Huber posted to clustering embl networks review statistics validation yeast by chad_davis on 2007-09-27 16:28:59 as along with 5 people Yanno jfr grahamc winterschlaefer Pao-Yang
	Benchmarking of dimeric threading and structure refinement. [My Copy] Proteins, Vol. 63, No. 3. (15 May 2006), pp. 457-465. by V. Grimm, Y. Zhang, J. Skolnick posted to algorithm structure validation binding by chad_davis on 2007-08-30 08:36:39 as
	Protein-Protein Interactions More Conserved within Species than across Species [My Copy] PLoS Comput Biol, Vol. 2, No. 7. (21 July 2006), e79. by Sven Mika, Burkhard Rost posted to algorithm annotation chemistry evolution modelling statistics structure validation yeast binding by chad_davis on 2007-07-24 17:12:50 as along with 8 people and 2 groups karthikraman chica RebeccaHamer robfsouza jeremymiller marcius skhadar dquest BioinfoCIPF SGU-CIPF
	Error bars in experimental biology [My Copy] J. Cell Biol., Vol. 177, No. 1. (9 April 2007), pp. 7-11. by Geoff Cumming, Fiona Fidler, David L. Vaux posted to classic classification gene_regulation microarray statistics validation by chad_davis on 2007-06-06 08:37:34 as along with 56 people and 5 groups Jporci pjmaybank inbetweener tt srmblack abhishek_tiwari druvus bangyuzhou schoeband brianb cambray dbikard rec3141 ajaymalik Gorzomagnificent daforerog sen_cheng yangjustinc maximilianh qwermish bayesian ntakano flips inesdesantiago brian ana batallah manduca kuhn Borelli dayjm kristina tny dullhunk rabu lechristophe nelmor jdelcampo fishtank emmahe lisa1 Daria_G devender bmaust cabbagezs natstreet winterschlaefer krokicki loopback007 wilbur tdmckee renatomilani delenca arindrartow guhjy mjoach structural_bioinformatics Bioinformatics VisionLab FlowCytometry Microbial-Ecology
	Inherent limitations in protein--protein docking procedures [My Copy] Bioinformatics, Vol. 23, No. 4. (15 February 2007), pp. 421-426. by Kowalsman, Noga, Eisenstein, Miriam posted to algorithm modelling review statistics structure validation binding by chad_davis on 2007-03-21 17:23:13 as along with 4 people iantunbridge flbarroso bicko rabio
	Predictions without templates: new folds, secondary structure, and contacts in CASP5. [My Copy] Proteins, Vol. 53 Suppl 6 (2003), pp. 436-456. by P. Aloy, A. Stark, C. Hadley, R. B. Russell posted to validation structure review modelling embl by chad_davis on 2007-02-05 13:48:47 as
	Structure prediction. How good are we? [My Copy] Curr Biol, Vol. 5, No. 5. (1 May 1995), pp. 488-490. by R. B. Russell, M. J. Sternberg posted to validation structure review embl classification by chad_davis on 2007-02-05 13:22:19 as
	Knowledge discovery and knowledge validation in intensive care. [My Copy] Artif Intell Med, Vol. 19, No. 3. (July 2000), pp. 225-249. by K. Morik, M. Imhoff, P. Brockhausen, T. Joachims, U. Gather, M. Imboff posted to validation classification algorithm proj_disocons by chad_davis on 2007-01-25 19:38:46 as
	A modified definition of Sov, a segment-based measure for protein secondary structure prediction assessment. [My Copy] Proteins, Vol. 34, No. 2. (1 February 1999), pp. 220-223. by A. Zemla, C. Venclovas, K. Fidelis, B. Rost posted to classification statistics structure validation by chad_davis on 2006-12-29 14:40:45 as
	Assessing the accuracy of prediction algorithms for classification: an overview [My Copy] Bioinformatics, Vol. 16, No. 5. (1 May 2000), pp. 412-424. by Pierre Baldi, Soren Brunak, Yves Chauvin, Claus A. Andersen, Henrik Nielsen posted to classic classification review statistics validation proj_disocons proj_bachelor proj_stabperf by chad_davis on 2006-11-03 13:46:21 as along with 10 people and 1 group waghsk ucbcjbm MarcoAlvarez ihaque eckart_bindewald skrofej girschick Evangelia wenhan sconlan MuraLab

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structure	236
binding	152
algorithm	136
review	112
embl	98
proj_disocons	82
database	81
complexes	80
classic	79
classification	79
proj_assembly	66
evolution	64
statistics	64
networks	58
disorder	53
modelling	49
service	46
feature_selection	44
ppi	42
proj_credo	40
data_integration	36
download	36
gene_regulation	30
yeast	29
annotation	28
proj_interprets	27
toolkit	25
validation	24
clustering	22
experimental	20
alignment	19
microarray	18
disease	16
chemistry	15
non-redundant	12
proj_stabperf	11
ensemble	10
data_mining	9
mpi	9
docking	8
drug	7
proj_cct	6
proj_bachelor	4
distributed	3

chad_davis's validation [24 articles] Export

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