chad_davis's yeast [29 articles] Export

Recent papers added to chad_davis's library classified by the tag yeast. You can also see everyone's yeast.

	The role of disorder in interaction networks: a structural analysis [My Copy] Molecular Systems Biology, Vol. 4 (25 March 2008) by Philip M. Kim, Andrea Sboner, Yu Xia, Mark Gerstein posted to disorder networks proj_disocons structure yeast binding by chad_davis on 2008-06-30 10:59:42 as along with 7 people mgomes pablocarb zwang bootsy biomcgary maralena phoenixzxl
	Incorporating high-throughput proteomics experiments into structural biology pipelines: Identification of the low-hanging fruits. [My Copy] Proteomics, Vol. 8, No. 10. (19 May 2008), pp. 1959-1964. by Roland A. A. Pache, Patrick Aloy posted to complexes embl proj_assembly structure yeast by chad_davis on 2008-05-25 01:26:08 as
	The elusive yeast interactome. [My Copy] Genome Biol, Vol. 7, No. 6. (2006) by J. Goll, P. Uetz posted to complexes experimental networks proj_assembly review yeast binding by chad_davis on 2008-05-05 09:11:33 as along with 3 people maryee eukfn Evangelia
	Subunit architecture of multimeric complexes isolated directly from cells [My Copy] EMBO Reports, Vol. aop, No. current. (18 August 2006) by Helena Hernandez, Andrzej Dziembowski, Thomas Taverner, Bertrand Seraphin, Carol V. Robinson posted to classic complexes experimental networks proj_assembly structure yeast binding by chad_davis on 2008-04-21 14:01:55 as along with 1 person faion
	Subunit Architecture of Intact Protein Complexes from Mass Spectrometry and Homology Modeling [My Copy] Acc. Chem. Res. (4 March 2008) by Thomas Taverner, Helena Hernandez, Michal Sharon, et al.Brandon T. Ruotolo, Dijana M. Vinkovic, Damien Devos, Robert B. Russell, Carol V. Robinson posted to algorithm complexes embl experimental modelling networks proj_assembly structure yeast binding by chad_davis on 2008-03-10 08:53:48 as along with 1 person faion
	Mapping protein family interactions: intramolecular and intermolecular protein family interaction repertoires in the PDB and yeast. [My Copy] J Mol Biol, Vol. 307, No. 3. (30 March 2001), pp. 929-938. by J. Park, M. Lappe, S. A. Teichmann posted to clustering networks non-redundant structure yeast database binding by chad_davis on 2008-02-19 13:36:37 as along with 5 people and 2 groups medic0747 ronkeliz ana tjimenez cjeans structural_bioinformatics Bioinformatics
	WI-PHI: A weighted yeast interactome enriched for direct physical interactions. [My Copy] Proteomics (6 February 2007) by Lars Kiemer, Stefano Costa, Marius Ueffing, Gianni Cesareni posted to database yeast binding by chad_davis on 2008-01-18 14:57:48 as along with 1 person nicoleq
	Where have all the interactions gone? Estimating the coverage of two-hybrid protein interaction maps. [My Copy] PLoS computational biology, Vol. 3, No. 11. (1 November 2007), e214. by Hailiang Huang, Bruno M. Jedynak, Joel S. Bader posted to review statistics validation yeast binding by chad_davis on 2008-01-08 09:55:53 as along with 4 people guhjy cjeans zwang Ema
	The molecular architecture of the nuclear pore complex [My Copy] Nature, Vol. 450, No. 7170. (29 November 2007), pp. 695-701. by Frank Alber, Svetlana Dokudovskaya, Liesbeth M. Veenhoff, et al.Wenzhu Zhang, Julia Kipper, Damien Devos, Adisetyantari Suprapto, Orit K. Schmidt, Rosemary Williams, Brian T. Chait, Andrej Sali, Michael P. Rout posted to complexes disorder embl structure yeast by chad_davis on 2007-12-03 12:50:44 as along with 9 people kgutwin MatthiasReimann hadesnumb neils cjeans zwang mkikkawa faion phoenixzxl
	SCPD: a promoter database of the yeast Saccharomyces cerevisiae. [My Copy] Bioinformatics, Vol. 15, No. 7-8. (g 1999), pp. 607-611. by J. Zhu, M. Q. Zhang posted to database proj_credo gene_regulation yeast by chad_davis on 2007-11-09 09:10:32 as along with 4 people xiaobeizhao lusk nklee njcitulike
	Divergence of Transcription Factor Binding Sites Across Related Yeast Species [My Copy] Science, Vol. 317, No. 5839. (10 August 2007), pp. 815-819. by Anthony R. Borneman, Tara A. Gianoulis, Zhengdong D. Zhang, et al.Haiyuan Yu, Joel Rozowsky, Michael R. Seringhaus, Lu Y. Wang, Mark Gerstein, Michael Snyder posted to proj_credo evolution gene_regulation networks yeast by chad_davis on 2007-10-27 13:32:42 as along with 22 people and 2 groups pradiptaray gdb fenghezi dbensasson caseybrown bryankr aalibes dpollard djkt mikaelhuss lusk cjeans sujaikumar zwang GustavoLacerda Jporci maximilianh cisevol njcitulike emptyhb nklee anka EisenLab cis-regulatory-evolution
	The unique hetero-oligomeric nature of the subunits in the catalytic cooperativity of the yeast Cct chaperonin complex. [My Copy] Proc Natl Acad Sci U S A, Vol. 94, No. 20. (30 September 1997), pp. 10780-10785. by P. Lin, F. Sherman posted to chemistry complexes experimental structure yeast proj_cct binding by chad_davis on 2007-10-23 10:58:32 as
	Structural disorder promotes assembly of protein complexes [My Copy] BMC Structural Biology, Vol. 7, No. 1. (08 October 2007), 65. by Hedi Hegyi, Eva Schad, Peter Tompa posted to proj_disocons complexes disorder structure yeast binding by chad_davis on 2007-10-15 09:07:57 as
	Coverage and error models of protein-protein interaction data by directed graph analysis [My Copy] Genome Biology, Vol. 8 (10 September 2007), R186. by Tony Chiang, Denise Scholtens, Deepayan Sarkar, Robert Gentleman, Wolfgang Huber posted to clustering embl networks review statistics validation yeast by chad_davis on 2007-09-27 16:28:59 as along with 5 people Yanno jfr grahamc winterschlaefer Pao-Yang
	Protein-Protein Interactions More Conserved within Species than across Species [My Copy] PLoS computational biology, Vol. 2, No. 7. (21 July 2006), e79. by Sven Mika, Burkhard Rost posted to algorithm annotation chemistry evolution modelling statistics structure validation yeast binding by chad_davis on 2007-07-24 17:12:50 as along with 7 people and 2 groups chica RebeccaHamer robfsouza jeremymiller marcius skhadar dquest BioinfoCIPF SGU-CIPF
	Multimeric threading-based prediction of protein-protein interactions on a genomic scale: application to the Saccharomyces cerevisiae proteome. [My Copy] Genome Res, Vol. 13, No. 6A. (June 2003), pp. 1146-1154. by L. Lu, A. K. Arakaki, H. Lu, J. Skolnick posted to modelling structure yeast algorithm binding by chad_davis on 2007-05-15 16:52:47 as along with 5 people and 1 group bicko mdimmic lfriedl ruvido cjeans kdl
	Protein complex compositions predicted by structural similarity [My Copy] Nucl. Acids Res., Vol. 34, No. 10. (31 May 2006), pp. 2943-2952. by Fred P. Davis, Hannes Braberg, Min Y. Shen, Ursula Pieper, Andrej Sali, M. S. Madhusudhan posted to modelling statistics structure yeast algorithm binding by chad_davis on 2007-04-04 20:30:38 as along with 1 person eukfn
	A comprehensive two-hybrid analysis to explore the yeast protein interactome. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 98, No. 8. (10 April 2001), pp. 4569-4574. by T. Ito, T. Chiba, R. Ozawa, M. Yoshida, M. Hattori, Y. Sakaki posted to networks yeast binding by chad_davis on 2007-04-02 19:27:31 as along with 19 people and 2 groups MarcJungbluth chica lawraga semin kristallreiner adiel dragonrez okarsligil lfriedl balajis nuke2005 kengg ruvido gcalda lpfernandes shikin hplatero csanford carlk kdl Bioinformatics
	Potential artefacts in protein-interaction networks. [My Copy] FEBS Lett, Vol. 530, No. 1-3. (23 October 2002), pp. 253-254. by P. Aloy, R. B. Russell posted to yeast statistics review networks modelling embl binding by chad_davis on 2007-02-05 10:46:12 as along with 3 people wnpx gurkanbebek ruvido
	Dynamic complex formation during the yeast cell cycle. [My Copy] Science (New York, N.Y.), Vol. 307, No. 5710. (4 February 2005), pp. 724-727. by U. de Lichtenberg, L. J. Jensen, S. Brunak, P. Bork posted to binding complexes embl networks yeast by chad_davis on 2007-02-05 10:39:28 as along with 12 people and 1 group chica mdimmic balajis wnpx koller massivemayhem cjeans arne phoenixzxl larsjuhljensen carlk gjuggler dIEMoSIRIS
	A complex prediction: three-dimensional model of the yeast exosome. [My Copy] EMBO Rep, Vol. 3, No. 7. (July 2002), pp. 628-635. by P. Aloy, F. D. Ciccarelli, C. Leutwein, et al.A. C. Gavin, Superti G. Furga, P. Bork, B. Boettcher, R. B. Russell posted to yeast structure modelling embl by chad_davis on 2007-01-22 10:13:46 as
	Proteome survey reveals modularity of the yeast cell machinery [My Copy] Nature, Vol. 440, No. 7084. (30 March 2006), pp. 631-636. by Anne C. Gavin, Patrick Aloy, Paola Grandi, et al.Roland Krause, Markus Boesche, Martina Marzioch, Christina Rau, Lars J. Jensen, Sonja Bastuck, Birgit Duempelfeld, Angela Edelmann, Marie A. Heurtier, Verena Hoffman, Christian Hoefert, Karin Klein, Manuela Hudak, Anne M. Michon, Malgorzata Schelder, Markus Schirle, Marita Remor, Tatjana Rudi, Sean Hooper, Andreas Bauer, Tewis Bouwmeester, Georg Casari, Gerard Drewes, Gitte Neubauer, Jens M. Rick, Bernhard Kuster, Peer Bork, Robert B. Russell, Giulio S. Furga posted to embl structure yeast binding by chad_davis on 2006-12-04 17:51:12 as along with 30 people and 10 groups tomhebbron ajbattle mgomes Scis0000002 lawraga bicko saket Yanno ana Borelli lfriedl ccots jmeppley balajis xico shantanu nirfriedman balabu dgront noano koller ruvido nicoleq lpfernandes phoenixzxl larsjuhljensen ellakat frohike carlk ethkim structural_bioinformatics kdl MathBio Biostatistics Bioinformatics microRNA Computational_Systems_Biology EvolutionaryComputation Computational-Neurobiology WetBiology
	Evaluation of clustering algorithms for protein-protein interaction networks [My Copy] BMC Bioinformatics, Vol. 7 (06 November 2006), 488. by Sylvain Brohee, Jacques van Helden posted to algorithm clustering networks ppi review yeast by chad_davis on 2006-11-12 15:10:20 as along with 16 people and 1 group kaarsinogen pdelosri jfr balajis nirfriedman dquest grahamc cjeans hpaces Pao-Yang oktie carlk Borelli AbnerCYH cerca ethkim EPFL_SB_ITP_LBS
	CYGD: the Comprehensive Yeast Genome Database. [My Copy] Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005) by U. Gueldener, M. Muensterkoetter, G. Kastenmueller, et al.N. Strack, J. van Helden, C. Lemer, J. Richelles, S. J. Wodak, Garcia J. Martinez, Perez J. E. Ortin, H. Michael, A. Kaps, E. Talla, B. Dujon, B. Andre, J. L. Souciet, J. De Montigny, E. Bon, C. Gaillardin, H. W. Mewes posted to classic yeast database by chad_davis on 2006-07-11 14:46:09 as along with 2 people irenas iris_2001
	MIPS: a database for genomes and protein sequences. [My Copy] Nucleic acids research, Vol. 30, No. 1. (1 January 2002), pp. 31-34. by H. W. Mewes, D. Frishman, U. Gueldener, et al.G. Mannhaupt, K. Mayer, M. Mokrejs, B. Morgenstern, M. Muensterkoetter, S. Rudd, B. Weil posted to classic yeast database by chad_davis on 2006-07-11 14:25:27 as along with 6 people and 1 group cerca lawraga Borelli irenas dgruiz dylanwalker dbk-lab
	MPact: the MIPS protein interaction resource on yeast. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by U. Gueldener, M. Muensterkoetter, M. Oesterheld, et al.P. Pagel, A. Ruepp, H. W. Mewes, V. Stuempflen posted to database ppi yeast by chad_davis on 2006-07-11 13:51:27 as along with 2 people raiyar carlk
	Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. [My Copy] Nature, Vol. 415, No. 6868. (10 January 2002), pp. 180-183. by Y. Ho, A. Gruhler, A. Heilbut, et al.G. D. Bader, L. Moore, S. L. Adams, A. Millar, P. Taylor, K. Bennett, K. Boutilier, L. Yang, C. Wolting, I. Donaldson, S. Schandorff, J. Shewnarane, M. Vo, J. Taggart, M. Goudreault, B. Muskat, C. Alfarano, D. Dewar, Z. Lin, K. Michalickova, A. R. Willems, H. Sassi, P. A. Nielsen, K. J. Rasmussen, J. R. Andersen, L. E. Johansen, L. H. Hansen, H. Jespersen, A. Podtelejnikov, E. Nielsen, J. Crawford, V. Poulsen, B. D. Sørensen, J. Matthiesen, R. C. Hendrickson, F. Gleeson, T. Pawson, M. F. Moran, D. Durocher, M. Mann, C. W. Hogue, D. Figeys, M. Tyers posted to yeast binding by chad_davis on 2006-07-07 16:48:11 as along with 13 people and 3 groups lpfernandes SarahW lawraga semin okarsligil bicko shivaram lfriedl lyongu gcalda raiyar helenamistry iris_2001 kdl Bioinformatics steinmetzlab
	A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae [My Copy] Nature, Vol. 403, No. 6770. (10 February 2000), pp. 623-627. by Peter Uetz, Loic Giot, Gerard Cagney, et al.Traci A. Mansfield, Richard S. Judson, James R. Knight, Daniel Lockshon, Vaibhav Narayan, Maithreyan Srinivasan, Pascale Pochart, Alia Q. Emili, Ying Li, Brian Godwin, Diana Conover, Theodore Kalbfleisch, Govindan Vijayadamodar, Meijia Yang, Mark Johnston, Stanley Fields, Jonathan M. Rothberg posted to yeast binding by chad_davis on 2006-07-07 16:47:16 as along with 19 people and 1 group mtaschuk nzm mgomes lawraga semin dragonrez bicko shivaram lfriedl j3xucite dyermd timflutre ruvido gcalda grahamc laughcry hplatero csanford carlk kdl
	Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. [My Copy] Nature, Vol. 440, No. 7084. (30 March 2006), pp. 637-643. by Nevan J. Krogan, Gerard Cagney, Haiyuan Yu, et al.Gouqing Zhong, Xinghua Guo, Alexandr Ignatchenko, Joyce Li, Shuye Pu, Nira Datta, Aaron P. Tikuisis, Thanuja Punna, Jos, Michael Shales, Xin Zhang, Michael Davey, Mark D. Robinson, Alberto Paccanaro, James E. Bray, Anthony Sheung, Bryan Beattie, Dawn P. Richards, Veronica Canadien, Atanas Lalev, Frank Mena, Peter Wong, Andrei Starostine, Myra M. Canete, James Vlasblom, Samuel Wu, Chris Orsi, Sean R. Collins, Shamanta Chandran, Robin Haw, Jennifer J. Rilstone, Kiran Gandi, Natalie J. Thompson, Gabe Musso, Peter St Onge, Shaun Ghanny, Mandy H. Y. Lam, Gareth Butland, Amin, Shigehiko Kanaya, Ali Shilatifard, Erin O'Shea, Jonathan S. Weissman, James C. Ingles, Timothy R. Hughes, John Parkinson, Mark Gerstein, Shoshana J. Wodak, Andrew Emili, Jack F. Greenblatt posted to complexes networks ppi structure yeast by chad_davis on 2006-06-23 09:19:04 as along with 28 people and 5 groups paccanarolab ajbattle mgomes jxl bicko cerca jiny Borelli lfriedl balajis marcius tardigrade nirfriedman balabu j3xucite nickluscombe koller raiyar cjeans nicoleq Evangelia csaveanu frohike carlk hplatero chasmand mapplab ethkim Paccanaro Lab kdl EBI-regulation BioinfoCIPF SGU-CIPF

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structure	236
binding	152
algorithm	136
review	112
embl	98
proj_disocons	82
database	81
complexes	80
classic	79
classification	79
proj_assembly	66
evolution	64
statistics	64
networks	58
disorder	53
modelling	49
service	46
feature_selection	44
ppi	42
proj_credo	40
data_integration	36
download	36
gene_regulation	30
yeast	29
annotation	28
proj_interprets	27
toolkit	25
validation	24
clustering	22
experimental	20
alignment	19
microarray	18
disease	16
chemistry	15
non-redundant	12
proj_stabperf	11
ensemble	10
data_mining	9
mpi	9
docking	8
drug	7
proj_cct	6
proj_bachelor	4
distributed	3

chad_davis's yeast [29 articles] Export

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