chasmand's library 55 articles Export

	Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data. [My Copy] Nature genetics, Vol. 34, No. 2. (11 June 2003), pp. 166-176. by Eran Segal, Michael Shapira, Aviv Regev, et al.Dana Pe'er, David Botstein, Daphne Koller, Nir Friedman posted to regulation gene_expression_data by chasmand on 2009-11-19 17:19:09 as along with 26 people and 1 group stharward bertelsen ipark-kaist VGreiff benjaminsb wangbo ajbattle cswinburne ggallone ealloza orzenil tuck bayesian wnpx tabu koller olympos fishtank dimatura karfunkel roys pkm dragonrez tvdbulck chrisamiller aviad_work Jarman Lab
	Current bioinformatics tools in genomic biomedical research (Review) [My Copy] International Journal of Molecular Medicine, Vol. 17, No. 6. (2006) by Andreas Teufel, Markus Krupp, Arndt Weinmann, Peter R. Galle posted to no-tag by chasmand on 2009-11-18 20:55:51 as
	Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists [My Copy] Nucl. Acids Res., Vol. 37, No. 1. (1 January 2009), pp. 1-13. by Da W. Huang, Brad T. Sherman, Richard A. Lempicki posted to tools reviews functional_analysis enrichment by chasmand on 2009-11-18 20:35:09 as along with 44 people and 2 groups darian hzoltan ipark-kaist giovenko lwaldron jcaddy antonkratz Zephyrus shikin yaredo tonamswish ddunbar robfsouza Keywan daforerog ptrobajo rdiaz bertelsen Stew inesdesantiago heliopais AlexanderPico aviad_work ekotelnikova frohike aramesh2 jfr zufar ilyashl dolchan paszkows lptolik thomaskelder AbnerCYH neils tmmurali ealloza barriot druvus renatomilani pengchy phoenixzxl guhjy sjcockell Bioinformatics - CRUK ConklinLab
	A joint model of regulatory and metabolic networks [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (04 July 2006), 332. by Chen H. Yeang, Martin Vingron posted to perturbation network_refinement graphical_model by chasmand on 2009-11-11 18:50:11 as along with 6 people ptrobajo cgaugain schwartzjmc alexg cgaray roys
	Elucidating regulatory mechanisms downstream of a signaling pathway using informative experiments. [My Copy] Molecular systems biology, Vol. 5 (7 July 2009) by Ewa Szczurek, Irit Gat-Viks, Jerzy Tiuryn, Martin Vingron posted to no-tag by chasmand on 2009-10-12 22:03:01 as along with 7 people reyez ptrobajo mluksza MarcelSchulz abhishek_tiwari mstumpf TRHvidsten
	From signatures to models: understanding cancer using microarrays [My Copy] Nature Genetics, Vol. 37 Suppl (01 June 2005), pp. S38-S45. by Eran Segal, Nir Friedman, Naftali Kaminski, Aviv Regev, Daphne Koller posted to reviews pathway-inference microarrays by chasmand on 2009-08-27 23:04:29 as along with 13 people and 1 group bertelsen roys lwaldron cswinburne aalibes textoris troels_marstrand wnpx nirfriedman rdiaz sampath shikin srp33 GeneGo
	The Systems Biology Graphical Notation [My Copy] Nature Biotechnology, Vol. 27, No. 8. (07 August 2009), pp. 735-741. by Nicolas L. Novere, Michael Hucka, Huaiyu Mi, et al.Stuart Moodie, Falk Schreiber, Anatoly Sorokin, Emek Demir, Katja Wegner, Mirit I. Aladjem, Sarala M. Wimalaratne, Frank T. Bergman, Ralph Gauges, Peter Ghazal, Hideya Kawaji, Lu Li, Yukiko Matsuoka, Alice Villeger, Sarah E. Boyd, Laurence Calzone, Melanie Courtot, Ugur Dogrusoz, Tom C. Freeman, Akira Funahashi, Samik Ghosh, Akiya Jouraku, Sohyoung Kim, Fedor Kolpakov, Augustin Luna, Sven Sahle, Esther Schmidt, Steven Watterson, Guanming Wu, Igor Goryanin, Douglas B. Kell, Chris Sander, Herbert Sauro, Jacky L. Snoep, Kurt Kohn, Hiroaki Kitano posted to no-tag by chasmand on 2009-08-17 20:09:22 as along with 38 people and 3 groups singhsh greg tonamswish pablocarb josepe abc623 daforerog abhishek_tiwari robertrentzsch ngehlenborg pekrau thegoose bertelsen fgibson Borelli thomaskelder pmendes dullhunk polivares brianb roys torfinnnome guhjy Zephyrus lenov reyez allysonlister apocapoc renatomilani VGreiff druvus sjcockell jandot megraw leliavski frohike fpattyn jhyang Orengo Group Journal Picks Journal picks Neuroblastoma
	Protein modifications in transcription elongation [My Copy] Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, Vol. 1789, No. 1. (January 2009), pp. 26-36. by S. Fuchs, R. Laribee, B. Strahl posted to transcription yeast by chasmand on 2009-07-31 21:12:10 as along with 1 person and 1 group skoch3 Koch_Lab
	Parameter Learning of Logic Programs for Symbolic-statistical Modeling [My Copy] Journal of Artificial Intelligence Research, Vol. 15 (2001), pp. 391-454. by Taisuke Sato, Yoshitaka Kameya posted to logic by chasmand on 2009-07-22 19:47:10 as
	SOLAR: A Consequence Finding System for Advanced Reasoning [My Copy] Automated Reasoning with Analytic Tableaux and Related Methods (2003), pp. 257-263. by Hidetomo Nabeshima, Koji Iwanuma, Katsumi Inoue posted to abduction logic by chasmand on 2009-07-22 19:44:40 as
	Evaluating Abductive Hypotheses using an EM Algorithm on BDDs [My Copy] In International Joint Conference on Artificial Intelligence (2009), pp. 810-815. by Katsumi Inoue, Taisuke Sato, Masakazu Ishihata, Yoshitaka Kameya, Hidetomo Nabeshima posted to abduction ijcai by chasmand on 2009-07-21 18:59:05 as
	Network Motifs: Simple Building Blocks of Complex Networks [My Copy] Science, Vol. 298, No. 5594. (25 October 2002), pp. 824-827. by R. Milo, S. Shen-Orr, S. Itzkovitz, N. Kashtan, D. Chklovskii, U. Alon posted to graphs by chasmand on 2009-04-30 16:04:41 as along with 72 people and 10 groups antonkratz jaspervoskuilen Sergey_gerbek nurban balabu ocs mjoach makrehchi schwartzjmc poirel tomhebbron arsyed vtraag sergiun fierykylin Akimasa operon dlobo daforerog wei_tang darian orahcio babakap brewbooks phoenixzxl Md_2007 mtagaya heliopais kaarsinogen galyardt cswinburne mullonc camster korakot aalibes ChaTo imouthesmp Borelli lfriedl alexg balicea tny ssb wnpx ddahlem cmm donade neveaire griota gurkanbebek jtaylor josepe iris_2001 michaelmampaey rebeccamancy karfunkel lenov Evangelia roys tfogal zibuyu maralena stefanoallesina pbull cmor renatomilani shikin carlk applesnow subhacom i-stevenson ethkim complex networks GEB Philosophy_of_Information dbk-lab Blog_and_Wiki_Research kdl FAB-lab ColDyn ADMiRes GeneGo
	Efficient Mining of Minimal Distinguishing Subgraph Patterns from Graph Databases [My Copy] Advances in Knowledge Discovery and Data Mining (2008), pp. 1062-1068. by Zhiping Zeng, Jianyong Wang, Lizhu Zhou posted to graph mining by chasmand on 2009-04-07 19:34:24 as
	GO::TermFinder-open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes [My Copy] Bioinformatics, Vol. 20, No. 18., 3710. by Elizabeth I. Boyle, Shuai Weng, Jeremy Gollub, et al.Heng Jin, David Botstein, J. Michael Cherry, Gavin Sherlock posted to databases genes go by chasmand on 2009-04-02 15:35:23 as along with 6 people druvus natstreet cjeans macavity1g kintoki roys
	Developing a Logical Model of Yeast Metabolism [My Copy] by Philip G. K. Reiser, Ross D. King, Douglas B. Kell, Stephen H. Muggleton, Christopher H. Bryant, Et posted to abduction induction yeast by chasmand on 2009-03-31 20:40:50 as along with 1 person reggiani
	Up-to-date catalogues of yeast protein complexes [My Copy] Nucl. Acids Res., Vol. 37, No. 3. (1 February 2009), pp. 825-831. by Shuye Pu, Jessica Wong, Brian Turner, Emerson Cho, Shoshana J. Wodak posted to protein yeast by chasmand on 2009-03-31 20:39:28 as along with 5 people colmryan dakelley phoenixzxl guhjy barriot
	Identifying functional modules in the physical interactome of <B><I>Saccharomyces cerevisiae</I></B> [My Copy] PROTEOMICS, Vol. 7, No. 6. (2007), pp. 944-960. by Shuye Pu, Jim Vlasblom, Andrew Emili, Jack Greenblatt, Shoshana J. Wodak posted to yeast by chasmand on 2009-03-31 20:38:51 as along with 1 person cjeans
	Gene Ontology: tool for the unification of biology [My Copy] Nature Genetics, Vol. 25, No. 1. (01 May 2000), pp. 25-29. by Michael Ashburner, Catherine A. Ball, Judith A. Blake, et al.David Botstein, Heather Butler, J. Michael Cherry, Allan P. Davis, Kara Dolinski, Selina S. Dwight, Janan T. Eppig, Midori A. Harris, David P. Hill, Laurie Issel-Tarver, Andrew Kasarskis, Suzanna Lewis, John C. Matese, Joel E. Richardson, Martin Ringwald, Gerald M. Rubin, Gavin Sherlock posted to no-tag by chasmand on 2009-03-31 20:37:31 as along with 76 people and 8 groups suizan sanchezbuelna Jporci artaban421 mtaschuk niallhaslam Zephyrus nicklynch mauriceccy pmendes jperkins timhubbard ipark-kaist jeremymiller vkwn MarcoAlvarez humburg mqbphcw3 kiekyon karinlag ocs marti robert85 allysonlister daforerog lawraga jorisslob bertelsen mshossain ajbattle paszkows coela fbristow kshameer anthropomorphism nolodie dagmar Robinder verdicchio raistrick vertikalist aalibes miguel dragonrez lfriedl chad_davis yas balajis indigoviolet benny dullhunk nirfriedman fisherp caporaso helliontroy zlu gurkanbebek djkt massivemayhem incovoma leechuck aconesa sgoetz javamint bootsy PunkRock natstreet naegele CitoJam pablomendes carlk marck dgront roys rvosa fongenae 8_01 BTS-PT-AS-CS kdl Bioinformatics EisenLab T_lab biomedical-nlp FAB-lab
	PTM-Switchboard--a database of posttranslational modifications of transcription factors, the mediating enzymes and target genes. [My Copy] Nucleic acids research, Vol. 37, No. Database issue. (January 2009) by L. Everett, A. Vo, S. Hannenhalli posted to yeast by chasmand on 2009-03-31 20:36:56 as along with 1 person guhjy
	A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology [My Copy] Nat Biotech, Vol. 26, No. 10. (09 October 2008), pp. 1155-1160. by Markus J. Herrgard, Neil Swainston, Paul Dobson, et al.Warwick B. Dunn, K. Yalcin Arga, Mikko Arvas, Nils Buthgen, Simon Borger, Roeland Costenoble, Matthias Heinemann, Michael Hucka, Nicolas Le Novere, Peter Li, Wolfram Liebermeister, Monica L. Mo, Ana P. Oliveira, Dina Petranovic, Stephen Pettifer, Evangelos Simeonidis, Kieran Smallbone, Irena Spasie, Dieter Weichart, Roger Brent, David S. Broomhead, Hans V. Westerhoff, Betul Kurdar, Merja Penttila, Edda Klipp, Bernhard O. Palsson, Uwe Sauer, Stephen G. Oliver, Pedro Mendes, Jens Nielsen, Douglas B. Kell posted to yeast by chasmand on 2009-03-29 19:27:36 as along with 22 people and 2 groups m_j pmendes windman83 jfr raiyar neilswainston irenas JeremyZucker schwartzjmc pinney pauldobson alaninmcr allysonlister zwang guhjy dbk michaelbarton ptrobajo neils dullhunk pengchy tmmurali MetabolicModeling BergmanLab
	Systematic, genome-wide identification of host genes affecting replication of a positive-strand RNA virus [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 26. (23 December 2003), pp. 15764-15769. by David B. Kushner, Brett D. Lindenbach, Valery Z. Grdzelishvili, Amine O. Noueiry, Scott M. Paul, Paul Ahlquist posted to ahlquist yeast by chasmand on 2009-03-29 18:32:25 as
	Integrating physical and genetic maps: from genomes to interaction networks [My Copy] Nature Reviews Genetics, Vol. 8, No. 9. (01 September 2007), pp. 699-710. by Andreas Beyer, Sourav Bandyopadhyay, Trey Ideker posted to genetic-interaction interactions physical-interaction yeast by chasmand on 2009-02-26 20:05:43 as along with 20 people and 4 groups Jporci dakelley mtaschuk Zephyrus druvus yyby misonneh giovenko bpcusack guhjy balicea dchughes sebastien_vigneau grahamc joepickrell zwang shikin lh1 cdeane carlk Roswell Cancer Crosstalk Bioinformatics G4ID Genetics-of-Gambling
	Modular epistasis in yeast metabolism [My Copy] Nat Genet, Vol. 37, No. 1. (12 December 2004), pp. 77-83. by Daniel Segre, Alexander DeLuna, George M. Church, Roy Kishony posted to genetic-interaction yeast by chasmand on 2009-02-26 17:24:13 as along with 11 people colmryan dakelley nzm ajbattle tmmurali RMGraze balajis i41m nirfriedman koller edwardmorrissey
	Exploration of the Function and Organization of the Yeast Early Secretory Pathway through an Epistatic Miniarray Profile [My Copy] Cell, Vol. 123, No. 3. (4 November 2005), pp. 507-519. by Maya Schuldiner, Sean R. Collins, Natalie J. Thompson, et al.Vladimir Denic, Arunashree Bhamidipati, Thanuja Punna, Jan Ihmels, Brenda Andrews, Charles Boone, Jack F. Greenblatt posted to genetic-interaction weekly-papers by chasmand on 2009-02-25 20:27:49 as along with 13 people and 2 groups dakelley thegoose2 colmryan nzm ajbattle tharris adiel okarsligil balajis nirfriedman jtaylor cjhall hplatero C. elegans / WormBase Bioinformatics
	Pathway redundancy and protein essentiality revealed in the Saccharomyces cerevisiae interaction networks [My Copy] Molecular Systems Biology, Vol. 3 (17 April 2007) by Igor Ulitsky, Ron Shamir posted to genetic-interaction physical-interaction yeast by chasmand on 2009-02-24 20:09:16 as along with 6 people colmryan dakelley benjaminsb nicoleq zwang carlk
	Systematic interpretation of genetic interactions using protein networks [My Copy] Nat Biotech, Vol. 23, No. 5. (05 May 2005), pp. 561-566. by Ryan Kelley, Trey Ideker posted to genetic-interaction protein-interaction yeast by chasmand on 2009-02-24 20:07:23 as along with 21 people and 2 groups colmryan nzm dakelley ajbattle mtaschuk benjaminsb lptolik nedwards okarsligil tuck balajis wnpx nirfriedman nickluscombe mmt koller massivemayhem patrycjam patrycja_missiuro mingzhi carlk Bioinformatics EBI-regulation
	Abducing Priorities to Derive Intended Conclusions [My Copy] In In Proceedings of the Sixteenth International Joint Conference on Artificial Intelligence (IJCAI’99 (1999), pp. 44-49. by Katsumi Inoue, Chiaki Sakama posted to abduction by chasmand on 2009-02-19 18:53:46 as
	From E-MAPs to module maps: dissecting quantitative genetic interactions using physical interactions [My Copy] Mol Syst Biol, Vol. 4 (15 July 2008) by Igor Ulitsky, Tomer Shlomi, Martin Kupiec, Ron Shamir posted to clustering gene interactions weekly-papers by chasmand on 2009-02-12 17:34:44 as along with 7 people TheresaNiederberger dakelley nzm jwhitney zwang roys ptrobajo
	Land Clearing and the Biofuel Carbon Debt [My Copy] Science, Vol. 319, No. 5867. (29 February 2008), pp. 1235-1238. by Joseph Fargione, Jason Hill, David Tilman, Stephen Polasky, Peter Hawthorne posted to biofuel by chasmand on 2008-08-11 16:47:32 as along with 9 people crogers Flit erika oilpalm skennedy lizmarshallpa sjanusz ruddyconsult AlisonCCB
	The Race for New Biofuels [My Copy] Caltech Engineering & Science, No. 2. (2008) by Frances H. Arnold posted to no-tag by chasmand on 2008-08-11 16:37:40 as
	Abduction and Induction: Essays on their Relation and Integration [My Copy] (1999) by P. Flach, A. Kakas posted to abduction by chasmand on 2008-07-30 21:52:12 as
	Using incomplete quantitative knowledge in qualitative reasoning [My Copy] In In Proc. of the Sixth National Conference on Artificial Intelligence (1988), pp. 324-329. by Benjamin Kuipers, Daniel Berleant posted to qualitative reasoning by chasmand on 2008-07-30 21:51:27 as
	Learning Qualitative Models for Application to Scientific Discovery [My Copy] by Simon M. Garrett, George M. Coghill, Ross D. King posted to abduction by chasmand on 2008-07-30 21:36:08 as
	Abductive Logic Programming [My Copy] Journal of Logic and Computation, Vol. 2, No. 6. (1992), pp. 719-770. by Antonis C. Kakas, Robert A. Kowalski, Francesca Toni posted to abduction by chasmand on 2008-07-30 21:35:05 as along with 1 person bfraser
	96abkl.pdf (application/pdf Object) [My Copy] posted to abduction by chasmand on 2008-07-17 21:23:55 as
	The MiSink Plugin: Cytoscape as a graphical interface to the Database of Interacting Proteins. [My Copy] Bioinformatics (6 June 2007) by Lukasz Salwinski, David Eisenberg posted to ahlquist visualization by chasmand on 2008-07-17 00:12:57 as along with 2 people guhjy grahamc
	AIMag03-BratkoSucwww.pdf (application/pdf Object) [My Copy] by Suc Bratko posted to qualitative reasoning by chasmand on 2008-07-14 15:28:03 as
	A high-resolution map of transcription in the yeast genome [My Copy] PNAS, Vol. 103, No. 14. (4 April 2006), pp. 5320-5325. by Lior David, Wolfgang Huber, Marina Granovskaia, et al.Joern Toedling, Curtis J. Palm, Lee Bofkin, Ted Jones, Ronald W. Davis, Lars M. Steinmetz posted to ahlquist yeast by chasmand on 2008-07-09 16:50:21 as along with 15 people and 2 groups oannes74 bartjacobse ThomasDOtto coela rdowell waszak tuck alexg eckart_bindewald dpollard entropy raiyar xingxu guhjy GeeSharpMinor EisenLab steinmetzlab
	Global analysis of protein expression in yeast [My Copy] Nature, Vol. 425, No. 6959. (16 October 2003), pp. 737-741. by Sina Ghaemmaghami, Won-Ki Huh, Kiowa Bower, et al.Russell W. Howson, Archana Belle, Noah Dephoure, Erin K. O'Shea, Jonathan S. Weissman posted to ahlquist gene yeast by chasmand on 2008-07-09 16:48:02 as along with 14 people viren4388 phebden jporternj nzm MarcJungbluth rebeccahainess nirfriedman nm raiyar nicoleq roys michaelbarton faion dylanwalker
	Mechanisms of Haploinsufficiency Revealed by Genome-Wide Profiling in Yeast [My Copy] Genetics, Vol. 169, No. 4. (1 April 2005), pp. 1915-1925. by Adam M. Deutschbauer, Daniel F. Jaramillo, Michael Proctor, et al.Jochen Kumm, Maureen E. Hillenmeyer, Ronald W. Davis, Corey Nislow, Guri Giaever posted to ahlquist gene yeast by chasmand on 2008-07-09 16:47:43 as along with 3 people yagyav michaelbarton madhadron
	Global landscape of protein complexes in the yeast Saccharomyces cerevisiae [My Copy] Nature, Vol. 440, No. 7084. (22 March 2006), pp. 637-643. by Nevan J. Krogan, Gerard Cagney, Haiyuan Yu, et al.Gouqing Zhong, Xinghua Guo, Alexandr Ignatchenko, Joyce Li, Shuye Pu, Nira Datta, Aaron P. Tikuisis, Thanuja Punna, JosÃ© M. PeregrÃn-Alvarez, Michael Shales, Xin Zhang, Michael Davey, Mark D. Robinson, Alberto Paccanaro, James E. Bray, Anthony Sheung, Bryan Beattie, Dawn P. Richards, Veronica Canadien, Atanas Lalev, Frank Mena, Peter Wong, Andrei Starostine, Myra M. Canete, James Vlasblom, Samuel Wu, Chris Orsi, Sean R. Collins, Shamanta Chandran, Robin Haw, Jennifer J. Rilstone, Kiran Gandi, Natalie J. Thompson, Gabe Musso, Peter St Onge, Shaun Ghanny, Mandy H. Y. Lam, Gareth Butland, Amin M. Altaf-Ul, Shigehiko Kanaya, Ali Shilatifard, Erin O'Shea, Jonathan S. Weissman, C. James Ingles, Timothy R. Hughes, John Parkinson, Mark Gerstein, Shoshana J. Wodak, Andrew Emili, Jack F. Greenblatt posted to ahlquist protein yeast by chasmand on 2008-07-09 16:47:25 as along with 30 people and 5 groups aceol mpotamias paccanarolab ajbattle mgomes jxl bicko cerca jiny Borelli lfriedl chad_davis balajis marcius tardigrade nirfriedman balabu j3xucite nickluscombe koller raiyar cjeans nicoleq Evangelia csaveanu frohike carlk hplatero mapplab ethkim Paccanaro Lab kdl EBI-regulation BioinfoCIPF SGU-CIPF
	The Chemical Genomic Portrait of Yeast: Uncovering a Phenotype for All Genes [My Copy] Science, Vol. 320, No. 5874. (18 April 2008), pp. 362-365. by Maureen E. Hillenmeyer, Eula Fung, Jan Wildenhain, et al.Sarah E. Pierce, Shawn Hoon, William Lee, Michael Proctor, St, Mike Tyers, Daphne Koller, Russ B. Altman, Ronald W. Davis, Corey Nislow, Guri Giaever posted to ahlquist by chasmand on 2008-07-09 16:44:13 as along with 17 people and 1 group daveGerrard bpcusack jdoconnell rdowell lawraga ajbattle sschurer ocs emptyhb tmmurali nfreed bala lp2 roys stajich guhjy raiyar Mycology
	Q3PF.PDF (application/pdf Object) [My Copy] posted to qualitative reasoning by chasmand on 2008-07-07 22:48:59 as
	crc7.pdf (application/pdf Object) [My Copy] posted to qualitative reasoning by chasmand on 2008-07-07 22:48:39 as
	Comprehensive curation and analysis of global interaction networks in Saccharomyces cerevisiae [My Copy] Journal of Biology, Vol. 5, No. 4. (08 June 2006), 11. by Teresa Reguly, Ashton Breitkreutz, Lorrie Boucher, et al.Bobby J. Breitkreutz, Gary Hon, Chad Myers, Ainslie Parsons, Helena Friesen, Rose Oughtred, Amy Tong, Chris Stark, Yuen Ho, David Botstein, Brenda Andrews, Charles Boone, Olga Troyanskya, Trey Ideker, Kara Dolinski, Nizar Batada, Mike Tyers posted to biogrid databases by chasmand on 2008-06-26 19:16:59 as along with 18 people and 3 groups carlk snuppepuppan tmmurali lfriedl balajis wnpx nickluscombe egralla citecat noano koller grahamc iris_2001 sgoetz shikin s041629 pmendes mtruksa kdl EBI-regulation GeneGo
	Exploration of essential gene functions via titratable promoter alleles. [My Copy] Cell, Vol. 118, No. 1. (9 July 2004), pp. 31-44. by S. Mnaimneh, A. P. Davierwala, J. Haynes, et al.J. Moffat, W. T. Peng, W. Zhang, X. Yang, J. Pootoolal, G. Chua, A. Lopez, M. Trochesset, D. Morse, N. J. Krogan, S. L. Hiley, Z. Li, Q. Morris, J. Grigull, N. Mitsakakis, C. J. Roberts, J. F. Greenblatt, C. Boone, C. A. Kaiser, B. J. Andrews, T. R. Hughes posted to ahlquist expression gene hughes by chasmand on 2008-06-19 17:13:00 as along with 4 people and 2 groups michaelbarton raiyar irenas nickluscombe dbk-lab EBI-regulation
	Functional discovery via a compendium of expression profiles. [My Copy] Cell, Vol. 102, No. 1. (7 July 2000), pp. 109-126. by T. R. Hughes, M. J. Marton, A. R. Jones, et al.C. J. Roberts, R. Stoughton, C. D. Armour, H. A. Bennett, E. Coffey, H. Dai, Y. D. He, M. J. Kidd, A. M. King, M. R. Meyer, D. Slade, P. Y. Lum, S. B. Stepaniants, D. D. Shoemaker, D. Gachotte, K. Chakraburtty, J. Simon, M. Bard, S. H. Friend posted to ahlquist dataset expression gene by chasmand on 2008-06-18 20:23:24 as along with 12 people and 3 groups svozil raiyar pengchy camster lfriedl nirfriedman nickluscombe patrycjam patrycja_missiuro naegele roys TheresaNiederberger dbk-lab kdl EBI-regulation
	Exploration of Essential Gene Functions via Titratable Promoter Alleles [My Copy] Cell, Vol. 118 (9 July 2004), pp. 31-44. by Sanie Mnaimneh, Armaity P. Davierwala, Jennifer Haynes, et al.Jason Moffat, Wen-Tao Peng, Wen Zhang, Xueqi Yang, Jeff Pootoolal, Gordon Chua, Andres Lopez, Miles Trochesset, Darcy Morse, Nevan J. Krogan, Shawna L. Hiley, Zhijian Li, Quaid Morris, Jörg Grigull, Nicholas Mitsakakis, Christopher J. Roberts, Jack F. Greenblatt, Charles Boone, Chris A. Kaiser, Brenda J. Andrews, Timothy R. Hughes posted to ahlquist gene by chasmand on 2008-06-18 18:17:36 as
	Global Mapping of the Yeast Genetic Interaction Network [My Copy] Science, Vol. 303, No. 5659. (6 February 2004), pp. 808-813. by Amy H. Tong, Guillaume Lesage, Gary D. Bader, et al.Huiming Ding, Hong Xu, Xiaofeng Xin, James Young, Gabriel F. Berriz, Renee L. Brost, Michael Chang, YiQun Chen, Xin Cheng, Gordon Chua, Helena Friesen, Debra S. Goldberg, Jennifer Haynes, Christine Humphries, Grace He, Shamiza Hussein, Lizhu Ke, Nevan Krogan, Zhijian Li, Joshua N. Levinson, Hong Lu, Patrice Menard, Christella Munyana, Ainslie B. Parsons, Owen Ryan, Raffi Tonikian, Tania Roberts, Anne-Marie Sdicu, Jesse Shapiro, Bilal Sheikh, Bernhard Suter, Sharyl L. Wong, Lan V. Zhang, Hongwei Zhu, Christopher G. Burd, Sean Munro, Chris Sander, Jasper Rine, Jack Greenblatt, Matthias Peter, Anthony Bretscher, Graham Bell, Frederick P. Roth, Grant W. Brown, Brenda Andrews, Howard Bussey, Charles Boone posted to gene interaction weekly-papers by chasmand on 2008-06-18 00:42:56 as along with 30 people and 2 groups kentz colmryan meanerelk rdowell TheresaNiederberger dakelley kinop nzm roys ajbattle czeller ldfu pcahan1 lfriedl lyongu luispedro opheliav tabu Chue nirfriedman nickluscombe koller raiyar patrycjam patrycja_missiuro jiny tresch Takayuki ksiek carlk kdl EBI-regulation
	Functional dissection of protein complexes involved in yeast chromosome biology using a genetic interaction map [My Copy] Nature, Vol. 446, No. 7137. (21 February 2007), pp. 806-810. by Sean R. Collins, Kyle M. Miller, Nancy L. Maas, et al.Assen Roguev, Jeffrey Fillingham, Clement S. Chu, Maya Schuldiner, Marinella Gebbia, Judith Recht, Michael Shales, Huiming Ding, Hong Xu, Junhong Han, Kristin Ingvarsdottir, Benjamin Cheng, Brenda Andrews, Charles Boone, Shelley L. Berger, Phil Hieter, Zhiguo Zhang, Grant W. Brown, C. James Ingles, Andrew Emili, C. David Allis, David P. Toczyski, Jonathan S. Weissman, Jack F. Greenblatt, Nevan J. Krogan posted to gene interaction yeast by chasmand on 2008-06-17 22:46:52 as along with 10 people tonamswish carlk colmryan dakelley nzm roys ajbattle mtaschuk balajis zwang

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yeast	18
ahlquist	10
gene	9
abduction	8
genetic-interaction	5
databases	4
interaction	4
protein	4
qualitative	4
reasoning	4
weekly-papers	3
expression	2
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logic	2
physical-interaction	2
reviews	2
biofuel	1
biogrid	1
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dip	1
enrichment	1
functional_analysis	1
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graphs	1
hughes	1
ijcai	1
induction	1
microarrays	1
mining	1
network_refinement	1
pathway-inference	1
perturbation	1
protein-interaction	1
regulation	1
tools	1
transcription	1
visualization	1

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