chica's library 153 articles Export

	Reactome knowledgebase of human biological pathways and processes. [My Copy] Nucleic acids research, Vol. 37, No. Database issue. (1 January 2009), pp. D619-622. by Lisa Matthews, Gopal Gopinath, Marc Gillespie, et al.Michael Caudy, David Croft, Bernard de Bono, Phani Garapati, Jill Hemish, Henning Hermjakob, Bijay Jassal, Alex Kanapin, Suzanna Lewis, Shahana Mahajan, Bruce May, Esther Schmidt, Imre Vastrik, Guanming Wu, Ewan Birney, Lincoln Stein, Peter D'Eustachio posted to interaction_network database by chica on 2009-10-11 17:08:23 as along with 7 people agomez Scis0000002 jfr shikin fgibson birney guhjy
	Targeting cell signalling pathways to fight the flu: towards a paradigm change in anti-influenza therapy. [My Copy] The Journal of antimicrobial chemotherapy, Vol. 64, No. 1. (July 2009), pp. 1-4. by Stephan Ludwig posted to signalling_network raf influenza by chica on 2009-10-06 13:07:16 as
	The Wnt signaling pathway effector TCF7L2 and type 2 diabetes mellitus. [My Copy] Molecular endocrinology (Baltimore, Md.), Vol. 22, No. 11. (November 2008), pp. 2383-2392. by Tianru Jin, Ling Liu posted to wnt signalling_network diabetes by chica on 2009-10-06 12:48:34 as along with 3 people guhjy ajaymalik booker
	Signal integration by JNK and p38 MAPK pathways in cancer development. [My Copy] Nature reviews. Cancer, Vol. 9, No. 8. (August 2009), pp. 537-549. by Erwin F. Wagner, Angel R. Nebreda posted to signalling_network mapk jnk cancer by chica on 2009-10-06 12:44:39 as along with 2 people tonamswish renatomilani
	An evolutionary and structural characterization of mammalian protein complex organization. [My Copy] BMC genomics, Vol. 9, No. 1. (23 December 2008) by Philip Wong, Sonja Althammer, Andrea Hildebrand, et al.Andreas Kirschner, Philipp Pagel, Bernd Geissler, Pawel Smialowski, Florian Blöchl, Matthias Oesterheld, Thorsten Schmidt, Normann Strack, Fabian J. Theis, Andreas Ruepp, Dmitrij Frishman posted to network_evolution mammalian complex_organization by chica on 2009-10-06 11:35:04 as along with 3 people zwang phoenixzxl chad_davis
	Intrinsically unstructured proteins and their functions. [My Copy] Nature reviews. Molecular cell biology, Vol. 6, No. 3. (01 March 2005), pp. 197-208. by H. Jane Dyson, Peter E. Wright posted to thermodynamics protein_function interaction_mechanism disorder by chica on 2009-10-05 20:04:31 as along with 4 people and 1 group yxue chad_davis penka cactus Nie
	Sniffers, buzzers, toggles and blinkers: dynamics of regulatory and signaling pathways in the cell. [My Copy] Current opinion in cell biology, Vol. 15, No. 2. (April 2003), pp. 221-231. by John J. Tyson, Katherine C. Chen, Bela Novak posted to signalling_network models feedback by chica on 2009-10-05 14:15:03 as along with 8 people and 5 groups nurban TobiasAbenius camster rklancer monod rhem1224 bayesian carmaus dbk-lab TCR_Signaling SysbioMPI-TCells dIEMoSIRIS MoSi-Rostock
	Cell regulation: determined to signal discrete cooperation. [My Copy] Trends in biochemical sciences, Vol. 34, No. 10. (08 October 2009), pp. 471-482. by Toby J. Gibson posted to signalling_network linear_motif cooperativity by chica on 2009-10-05 11:22:34 as
	Modelling the dynamics of signalling pathways. [My Copy] Essays in biochemistry, Vol. 45 (2008), pp. 1-28. by Sree N. Sreenath, Kwang-Hyun H. Cho, Peter Wellstead posted to signalling_network dynamics_modelling by chica on 2009-10-02 14:10:12 as along with 2 people peterli cannin
	2D-DIGE: comparative proteomics of cellular signalling pathways. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 517 (2009), pp. 105-132. by Nadia Ben B. Larbi, Caroline Jefferies posted to signalling_network experimental_method comparative_proteomics by chica on 2009-10-02 13:52:26 as
	Signalling to translation: how signal transduction pathways control the protein synthetic machinery. [My Copy] The Biochemical journal, Vol. 403, No. 2. (15 April 2007), pp. 217-234. by Christopher G. Proud posted to signalling_network protein_synthesis homeostasis cell_growth by chica on 2009-10-02 13:44:52 as along with 1 person guhjy
	MAP kinase signalling pathways in cancer. [My Copy] Oncogene, Vol. 26, No. 22. (14 May 2007), pp. 3279-3290. by A. S. Dhillon, S. Hagan, O. Rath, W. Kolch posted to signalling_network mapk_signalling_network cancer by chica on 2009-10-02 13:02:11 as along with 1 person guhjy
	Proteomes and transcriptomes of the Apicomplexa--where's the message? [My Copy] International journal for parasitology, Vol. 39, No. 2. (31 January 2009), pp. 135-143. by J. M. Wastling, D. Xia, A. Sohal, M. Chaussepied, A. Pain, G. Langsley posted to proteome apicomplexa by chica on 2009-08-16 23:45:05 as along with 1 person GeeSharpMinor
	Structural systems biology: modelling protein interactions. [My Copy] Nature reviews. Molecular cell biology, Vol. 7, No. 3. (March 2006), pp. 188-197. by Patrick Aloy, Robert B. Russell posted to structural_homology_modelling interaction_prediction by chica on 2009-08-16 22:49:02 as along with 23 people and 3 groups timg Scis0000002 ubcg08l ana aalibes bicko xico dgront drastic choonpeng henschel ruvido massivemayhem cat_worth fishtank iris_2001 gvuister lpfernandes Evangelia andreas_foersch higueruelo chad_davis jteyra structural_bioinformatics Bioinformatics WetBiology
	Local structural disorder imparts plasticity on linear motifs. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 8. (15 April 2007), pp. 950-956. by Monika Fuxreiter, Peter Tompa, István Simon posted to linear_motif disorder by chica on 2009-08-16 22:23:48 as along with 1 person zdai
	An empirical framework for binary interactome mapping. [My Copy] Nature methods, Vol. 6, No. 1. (07 January 2009), pp. 83-90. by Kavitha Venkatesan, Jean-François F. Rual, Alexei Vazquez, et al.Ulrich Stelzl, Irma Lemmens, Tomoko Hirozane-Kishikawa, Tong Hao, Martina Zenkner, Xiaofeng Xin, Kwang-Il I. Goh, Muhammed A. Yildirim, Nicolas Simonis, Kathrin Heinzmann, Fana Gebreab, Julie M. Sahalie, Sebiha Cevik, Christophe Simon, Anne-Sophie S. de Smet, Elizabeth Dann, Alex Smolyar, Arunachalam Vinayagam, Haiyuan Yu, David Szeto, Heather Borick, Amélie Dricot, Niels Klitgord, Ryan R. Murray, Chenwei Lin, Maciej Lalowski, Jan Timm, Kirstin Rau, Charles Boone, Pascal Braun, Michael E. Cusick, Frederick P. Roth, David E. Hill, Jan Tavernier, Erich E. Wanker, Albert-László L. Barabási, Marc Vidal posted to interactome human data_quality by chica on 2009-08-13 13:58:40 as along with 4 people lawraga jfr lp2 guhjy
	Protein interactions: two methods for assessment of the reliability of high throughput observations. [My Copy] Molecular & cellular proteomics : MCP, Vol. 1, No. 5. (May 2002), pp. 349-356. by Charlotte M. Deane, Łukasz Salwiński, Ioannis Xenarios, David Eisenberg posted to interactome high_throughput gene_expression data_quality by chica on 2009-08-13 13:50:22 as along with 16 people and 1 group anf lawraga jimineep lptolik zdai tmmurali lfriedl bluto henschel ruvido iris_2001 shikin cdeane Pao-Yang ras chasmand kdl
	Prediction of protein-protein interactions: a study of the co-evolution model. [My Copy] Methods in molecular biology (Clifton, N.J.), Vol. 541 (2009), pp. 61-88. by Itai Sharon, Jason V. Davis, Golan Yona posted to interaction_prediction coevolution benchmark by chica on 2009-08-11 17:09:43 as along with 3 people kgutwin zwang phoenixzxl
	Evolution in protein interaction networks: co-evolution, rewiring and the role of duplication. [My Copy] Biochemical Society transactions, Vol. 37, No. Pt 4. (August 2009), pp. 768-771. by David L. Robertson, Simon C. Lovell posted to network_evolution coevolution by chica on 2009-08-11 17:07:23 as along with 1 person biomcgary
	Predicting protein domain interactions from coevolution of conserved regions. [My Copy] Proteins, Vol. 67, No. 4. (1 June 2007), pp. 811-820. by Maricel G. Kann, Raja Jothi, Praveen F. Cherukuri, Teresa M. Przytycka posted to interaction_evolution domain_domain_interaction coevolution by chica on 2009-08-11 17:04:35 as along with 2 people roys cjeans
	Specificity in protein interactions and its relationship with sequence diversity and coevolution [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 19. (8 May 2007), pp. 7999-8004. by Luke Hakes, Simon C. Lovell, Stephen G. Oliver, David L. Robertson posted to specificity interaction_evolution coevolution by chica on 2009-08-11 17:02:48 as along with 14 people and 2 groups mgomes diamantis dullhunk marti stevanspringer bjorns cjeans zwang Garamonfok cursonivel1 tale winterschlaefer phoenixzxl chrys FAB-lab cursonivel1
	ADVICE: Automated Detection and Validation of Interaction by Co-Evolution. [My Copy] Nucleic acids research, Vol. 32, No. Web Server issue. (1 July 2004) by Soon-Heng H. Tan, Zhuo Zhang, See-Kiong K. Ng posted to interaction_prediction computational_method coevolution by chica on 2009-08-11 17:00:51 as
	Evidence for the concerted evolution between short linear protein motifs and their flanking regions. [My Copy] PloS One, Vol. 4, No. 7. (2009) by Claudia Chica, Francesca Diella, Toby J. Gibson posted to coevolution linear_motif_context linear_motif_evolution by chica on 2009-08-10 13:54:46 as along with 1 person niallhaslam
	A new protein linear motif benchmark for multiple sequence alignment software. [My Copy] BMC bioinformatics, Vol. 9 (25 April 2008), 213. by Emmanuel Perrodou, Claudia Chica, Olivier Poch, Toby J. Gibson, Julie D. Thompson posted to benchmark linear_motif_alignment by chica on 2009-08-10 13:53:55 as along with 3 people niallhaslam biehl chad_davis
	A tree-based conservation scoring method for short linear motifs in multiple alignments of protein sequences. [My Copy] BMC bioinformatics, Vol. 9 (06 May 2008), 229. by Claudia Chica, Alberto Labarga, Cathryn M. Gould, Rodrigo López, Toby J. Gibson posted to computational_method conservation_score linear_motif by chica on 2009-08-10 13:53:13 as along with 6 people niallhaslam chad_davis Evangelia cabbagesofdoom biehl alanrw
	Discovery of candidate KEN-box motifs using cell cycle keyword enrichment combined with native disorder prediction and motif conservation. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 4. (15 February 2008), pp. 453-457. by Sushama Michael, Gilles Travé, Chenna Ramu, Claudia Chica, Toby J. Gibson posted to cell_cycle discovery_pipeline linear_motif by chica on 2009-08-10 13:52:20 as along with 3 people niallhaslam kluck janasont
	KEPE--a motif frequently superimposed on sumoylation sites in metazoan chromatin proteins and transcription factors. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 1. (1 January 2009), pp. 1-5. by Francesca Diella, Sophie Chabanis, Katja Luck, et al.Claudia Chica, Chenna Ramu, Claus Nerlov, Toby J. Gibson posted to discovery_pipeline linear_motif sumoylation by chica on 2009-08-10 13:50:58 as along with 1 person reyez
	Scansite 2.0: Proteome-wide prediction of cell signaling interactions using short sequence motifs. [My Copy] Nucleic acids research, Vol. 31, No. 13. (1 July 2003), pp. 3635-3641. by John C. Obenauer, Lewis C. Cantley, Michael B. Yaffe posted to database linear_motif profile by chica on 2009-08-10 13:49:34 as along with 3 people mloewer neils Evangelia
	ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins. [My Copy] Nucleic acids research, Vol. 31, No. 13. (1 July 2003), pp. 3625-3630. by Pål Puntervoll, Rune Linding, Christine Gemünd, et al.Sophie Chabanis-Davidson, Morten Mattingsdal, Scott Cameron, David M. Martin, Gabriele Ausiello, Barbara Brannetti, Anna Costantini, Fabrizio Ferrè, Vincenza Maselli, Allegra Via, Gianni Cesareni, Francesca Diella, Giulio Superti-Furga, Lucjan Wyrwicz, Chenna Ramu, Caroline Mcguigan, Rambabu Gudavalli, Ivica Letunic, Peer Bork, Leszek Rychlewski, Bernhard Küster, Manuela Helmer-Citterich, William N. Hunter, Rein Aasland, Toby J. Gibson posted to database linear_motif by chica on 2009-08-10 13:47:50 as along with 3 people phoenixzxl chad_davis Evangelia
	KEGG Atlas mapping for global analysis of metabolic pathways. [My Copy] Nucleic acids research, Vol. 36, No. Web Server issue. (1 July 2008), gkn282. by Shujiro Okuda, Takuji Yamada, Masami Hamajima, et al.Masumi Itoh, Toshiaki Katayama, Peer Bork, Susumu Goto, Minoru Kanehisa posted to database by chica on 2009-08-10 13:25:24 as along with 5 people epigenetics michaelbarton reyez renatomilani guhjy
	Mitogen-Activated Protein Kinase: Conservation of a Three-Kinase Module From Yeast to Human [My Copy] Physiol. Rev., Vol. 79, No. 1. (1 January 1999), pp. 143-180. by C. Widmann, S. Gibson, M. B. Jarpe, G. L. Johnson posted to mapk network_evolution network_module signalling_network by chica on 2009-08-10 11:51:17 as along with 2 people eudominguezmartin baikanamako
	Functions of MAP kinases: insights from gene-targeting studies. [My Copy] Journal of biochemistry, Vol. 135, No. 6. (June 2004), pp. 653-656. by Keisuke Kuida, Diane M. Boucher posted to lethality signalling_network by chica on 2009-08-10 11:46:42 as
	Clues to the evolution of complex signaling machinery. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 28. (15 July 2008), pp. 9453-9454. by Bruce J. Mayer posted to choanoflagellate network_evolution tyrosine_phosphorylation by chica on 2009-08-10 11:38:46 as
	Unequal evolutionary conservation of human protein interactions in interologous networks. [My Copy] Genome biology, Vol. 8, No. 5. (29 May 2007), R95. by Kevin R. Brown, Igor Jurisica posted to interaction_evolution interolog network_evolution by chica on 2009-08-10 10:29:47 as along with 6 people saket cerca diamantis grahamc zwang winterschlaefer
	Gaining confidence in high-throughput protein interaction networks. [My Copy] Nature biotechnology, Vol. 22, No. 1. (January 2004), pp. 78-85. by Joel S. Bader, Amitabha Chaudhuri, Jonathan M. Rothberg, John Chant posted to computational_method data_quality protein_interaction by chica on 2009-08-10 10:11:15 as along with 16 people and 1 group carlk anf dakelley lawraga wenhui ocs dragonrez lfriedl gurkanbebek raiyar cjeans iris_2001 patrycjam patrycja_missiuro Evangelia ellakat kdl
	A complex-centric view of protein network evolution. [My Copy] Nucleic acids research, Vol. 37, No. 12. (1 July 2009), e88. by Nir Yosef, Martin Kupiec, Eytan Ruppin, Roded Sharan posted to network_comparison network_evolution protein_complex by chica on 2009-08-10 10:07:58 as along with 11 people and 1 group carlk saket dakelley tomhebbron davidalee leemond31 druvus kiekyon neils tmmurali grahamc Orengo Group Journal Picks
	Fast and accurate alignment of multiple protein networks. [My Copy] Journal of computational biology : a journal of computational molecular cell biology, Vol. 16, No. 8. (22 August 2009), pp. 989-999. by Maxim Kalaev, Vineet Bafna, Roded Sharan posted to computational_method multiple_alignment network_alignment by chica on 2009-08-10 10:06:23 as along with 3 people Balou brianb nuin
	Conserved patterns of protein interaction in multiple species. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 6. (8 February 2005), pp. 1974-1979. by Roded Sharan, Silpa Suthram, Ryan M. Kelley, et al.Tanja Kuhn, Scott McCuine, Peter Uetz, Taylor Sittler, Richard M. Karp, Trey Ideker posted to clusters computational_method linear_pathways multiple_alignment network_alignment by chica on 2009-08-10 10:02:21 as along with 18 people and 2 groups kiekyon thegoose2 robfsouza carlk tharris jiny sza dragonrez okarsligil balajis nuke2005 maryee gurkanbebek koller cjeans iris_2001 maralena mdstobbe C. elegans / WormBase Bioinformatics
	Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data. [My Copy] Journal of computational biology : a journal of computational molecular cell biology, Vol. 12, No. 6. (g 2005), pp. 835-846. by Roded Sharan, Trey Ideker, Brian Kelley, Ron Shamir, Richard M. Karp posted to computational_method network_comparison protein_complex by chica on 2009-08-10 09:53:53 as along with 3 people and 1 group carlk okarsligil nuke2005 Bioinformatics
	PathBLAST: a tool for alignment of protein interaction networks. [My Copy] Nucleic acids research, Vol. 32, No. Web Server issue. (1 July 2004) by Brian P. Kelley, Bingbing Yuan, Fran Lewitter, Roded Sharan, Brent R. Stockwell, Trey Ideker posted to computational_method network_alignment by chica on 2009-08-10 09:49:34 as along with 7 people sergiun sza dragonrez nuke2005 AbnerCYH koller carlk
	Conserved pathways within bacteria and yeast as revealed by global protein network alignment [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 20. (30 September 2003), pp. 11394-11399. by Brian P. Kelley, Roded Sharan, Richard M. Karp, et al.Taylor Sittler, David E. Root, Brent R. Stockwell, Trey Ideker posted to linear_pathways network_alignment pairwise_alignment by chica on 2009-08-10 09:46:54 as along with 10 people and 1 group emmackinnon okarsligil balajis nuke2005 gurkanbebek mirzazadeh denilw shu mdstobbe carlk Bioinformatics
	IntAct--open source resource for molecular interaction data. [My Copy] Nucleic acids research, Vol. 35, No. Database issue. (12 January 2007), pp. D561-565. by S. Kerrien, Y. Alam-Faruque, B. Aranda, et al.I. Bancarz, A. Bridge, C. Derow, E. Dimmer, M. Feuermann, A. Friedrichsen, R. Huntley, C. Kohler, J. Khadake, C. Leroy, A. Liban, C. Lieftink, L. Montecchi-Palazzi, S. Orchard, J. Risse, K. Robbe, B. Roechert, D. Thorneycroft, Y. Zhang, R. Apweiler, H. Hermjakob posted to database protein_interaction by chica on 2009-08-10 09:43:12 as along with 11 people and 3 groups dullhunk jperkins robert85 mbehbah1 diamantis guhjy chad_davis joergkurtwegner lpfernandes carlk bicko Molecular-Modelling Drug-Design Cheminformatics
	DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions. [My Copy] Nucleic acids research, Vol. 30, No. 1. (1 January 2002), pp. 303-305. by Ioannis Xenarios, Lukasz Salwínski, Xiaoqun Joyce, Patrick Higney, Sul-Min M. Kim, David Eisenberg posted to database protein_interaction by chica on 2009-08-10 09:42:16 as along with 6 people mgomes balajis nuke2005 wnpx gurkanbebek carlk
	A human protein-protein interaction network: a resource for annotating the proteome. [My Copy] Cell, Vol. 122, No. 6. (23 September 2005), pp. 957-968. by Ulrich Stelzl, Uwe Worm, Maciej Lalowski, et al.Christian Haenig, Felix H. Brembeck, Heike Goehler, Martin Stroedicke, Martina Zenkner, Anke Schoenherr, Susanne Koeppen, Jan Timm, Sascha Mintzlaff, Claudia Abraham, Nicole Bock, Silvia Kietzmann, Astrid Goedde, Engin Toksöz, Anja Droege, Sylvia Krobitsch, Bernhard Korn, Walter Birchmeier, Hans Lehrach, Erich E. Wanker posted to human interactome yeast_to_hybrid by chica on 2009-08-10 09:41:11 as along with 11 people aelef biozhang2001 dragonrez kuhn textoris Schmidtc maryee eukfn pattisyang antonkratz Evangelia
	Functional organization of the yeast proteome by systematic analysis of protein complexes [My Copy] Nature, Vol. 415, No. 6868. (10 January 2002), pp. 141-147. by Anne-Claude Gavin, Markus Bosche, Roland Krause, et al.Paola Grandi, Martina Marzioch, Andreas Bauer, Jorg Schultz, Jens M. Rick, Anne-Marie Michon, Cristina-Maria Cruciat, Marita Remor, Christian Hofert, Malgorzata Schelder, Miro Brajenovic, Heinz Ruffner, Alejandro Merino, Karin Klein, Manuela Hudak, David Dickson, Tatjana Rudi, Volker Gnau, Angela Bauch, Sonja Bastuck, Bettina Huhse, Christina Leutwein, Marie-Anne Heurtier, Richard R. Copley, Angela Edelmann, Erich Querfurth, Vladimir Rybin, Gerard Drewes, Manfred Raida, Tewis Bouwmeester, Peer Bork, Bertrand Seraphin, Bernhard Kuster, Gitte Neubauer, Giulio Superti-Furga posted to interactome tap_purification yeast by chica on 2009-08-10 09:39:45 as along with 23 people and 2 groups carlk lawraga semin cerca taenneken adiel baaden dragonrez shivaram helenc lfriedl chad_davis balajis opheliav wnpx becarmson raiyar grahamc nicoleq iris_2001 csanford frohike ethkim kdl steinmetzlab
	A comprehensive two-hybrid analysis to explore the yeast protein interactome. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 98, No. 8. (10 April 2001), pp. 4569-4574. by T. Ito, T. Chiba, R. Ozawa, M. Yoshida, M. Hattori, Y. Sakaki posted to interactome yeast yeast_to_hybrid by chica on 2009-08-10 09:38:56 as along with 19 people and 2 groups MarcJungbluth lawraga semin kristallreiner adiel dragonrez okarsligil lfriedl chad_davis balajis nuke2005 kengg ruvido gcalda lpfernandes shikin hplatero csanford carlk kdl Bioinformatics
	Requirement for Src family protein tyrosine kinases in G2 for fibroblast cell division. [My Copy] Science (New York, N.Y.), Vol. 269, No. 5230. (15 September 1995), pp. 1567-1569. by S. Roche, S. Fumagalli, S. A. Courtneidge posted to functional_overlap_paralogous src_famiy by chica on 2009-08-10 09:31:36 as
	NetworkBLAST: comparative analysis of protein networks. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 4. (15 February 2008), pp. 594-596. by Maxim Kalaev, Mike Smoot, Trey Ideker, Roded Sharan posted to computational_method network_comparison by chica on 2009-08-04 09:29:47 as along with 7 people and 1 group megraw giovenko guhjy grahamc laughcry barriot smgomez GomezLab
	Organization of cell-regulatory systems through modular-protein-interaction domains. [My Copy] Philosophical transactions. Series A, Mathematical, physical, and engineering sciences, Vol. 361, No. 1807. (15 June 2003), pp. 1251-1262. by Tony Pawson posted to modular_interaction network_evolution network_linkage by chica on 2009-08-03 22:27:08 as along with 1 person Evangelia
	Regulatory evolution across the protein interaction network. [My Copy] Nature genetics, Vol. 36, No. 10. (October 2004), pp. 1059-1060. by Bernardo Lemos, Colin D. Meiklejohn, Daniel L. Hartl posted to expression_pattern interaction_evolution network_evolution by chica on 2009-08-02 12:30:55 as along with 1 person and 1 group penka Nie

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coevolution	24
network_evolution	23
interaction_evolution	16
computational_method	15
signalling_network	15
interaction_network	10
interactome	10
pfalciparum	10
protein_interaction	9
interaction_prediction	8
linear_motif	8
database	7
protein_complex	7
protein_evolutionary_rate	7
evolvability	6
network_module	6
phylogenetics	6
yeast	6
interaction_interface	5
protein_evolution	5
protein_function_prediction	5
disorder	4
interolog	4
malaria	4
network_alignment	4
robustness	4
cooperativity	3
data_quality	3
duplication	3
essenciality	3
experimental_method	3
human	3
network_comparison	3
selection	3
transcriptional_network	3
yeast_to_hybrid	3
apicomplexa	2
application	2
benchmark	2
cancer	2
cell_cycle	2
comparative_method	2
discovery_pipeline	2
domain_domain_interaction	2
drosophila	2
evolutionary_model	2
gene_expression	2
linear_motif_evolution	2
linear_pathways	2
mammalian	2
mapk	2
maximum_likelihood	2
multiple_alignment	2
network_reconstruction	2
network_topology	2
neutral_evolution	2
phylogenetic_profile	2
sequence-based_method	2
sorting	2
specificity	2
synthetic_biology	2
within_gene_coevo	2
archaea	1
bacteria	1
cell_growth	1
cell_regulation	1
cellular_machine	1
centrality	1
choanoflagellate	1
clusters	1
codon_substitution_models	1
comparative_proteomics	1
complex_organization	1
connectivity	1
conservation_score	1
contrast_method	1
cooption_host_proteins	1
cytochrome	1
diabetes	1
disease	1
distance_matrix	1
drosophila_phylogeny	1
drug_resistance	1
dynamics_modelling	1
enzyme_evolution	1
evolutionary_noise	1
evolutionary_rate	1
expression_pattern	1
feedback	1
folding	1
functional_overlap_paralogous	1
gene_network	1
genome	1
genome_database	1
geographic_distribution	1
go_annotation	1
high_throughput	1
homeostasis	1
homomer	1
influenza	1
interaction_mechanism	1
interdomain_interaction	1
jnk	1
lethality	1
linear_motif_alignment	1
linear_motif_context	1
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mapk_signalling_network	1
mirror__tree	1
models	1
modular_interaction	1
molecular_evolution	1
multidomain_protein	1
network_linkage	1
network_theory	1
non-homogeneus_models	1
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parsimony	1
phosphorylation	1
physiological_states	1
plasmodium	1
prediction_tool	1
probabilistic_model	1
profile	1
protein_function	1
protein_synthesis	1
proteome	1
proteomic_study	1
quaternary_structure	1
raf	1
receptor_ligand_coevolution	1
significance	1
socio_economical_study	1
src_famiy	1
structural_homology_modelling	1
structural_study	1
sumoylation	1
surface_proteins	1
systems_biology	1
tap_purification	1
thermodynamics	1
transcriptome	1
transient_interactions	1
tree_comparison	1
tyrosine_phosphorylation	1
wnt	1

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