chica's Ideker:T [7 articles] Export

Recent papers posted to chica's library by the author Ideker:T. You can also see everyone's Ideker:T.

	Conserved patterns of protein interaction in multiple species. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 6. (8 February 2005), pp. 1974-1979. by Roded Sharan, Silpa Suthram, Ryan M. Kelley, et al.Tanja Kuhn, Scott McCuine, Peter Uetz, Taylor Sittler, Richard M. Karp, Trey Ideker posted to clusters computational_method linear_pathways multiple_alignment network_alignment by chica on 2009-08-10 10:02:21 as along with 18 people and 2 groups kiekyon thegoose2 robfsouza carlk tharris jiny sza dragonrez okarsligil balajis nuke2005 maryee gurkanbebek koller cjeans iris_2001 maralena mdstobbe C. elegans / WormBase Bioinformatics
	Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data. [My Copy] Journal of computational biology : a journal of computational molecular cell biology, Vol. 12, No. 6. (g 2005), pp. 835-846. by Roded Sharan, Trey Ideker, Brian Kelley, Ron Shamir, Richard M. Karp posted to computational_method network_comparison protein_complex by chica on 2009-08-10 09:53:53 as along with 3 people and 1 group carlk okarsligil nuke2005 Bioinformatics
	PathBLAST: a tool for alignment of protein interaction networks. [My Copy] Nucleic acids research, Vol. 32, No. Web Server issue. (1 July 2004) by Brian P. Kelley, Bingbing Yuan, Fran Lewitter, Roded Sharan, Brent R. Stockwell, Trey Ideker posted to computational_method network_alignment by chica on 2009-08-10 09:49:34 as along with 7 people sergiun sza dragonrez nuke2005 AbnerCYH koller carlk
	Conserved pathways within bacteria and yeast as revealed by global protein network alignment [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 20. (30 September 2003), pp. 11394-11399. by Brian P. Kelley, Roded Sharan, Richard M. Karp, et al.Taylor Sittler, David E. Root, Brent R. Stockwell, Trey Ideker posted to linear_pathways network_alignment pairwise_alignment by chica on 2009-08-10 09:46:54 as along with 10 people and 1 group emmackinnon okarsligil balajis nuke2005 gurkanbebek mirzazadeh denilw shu mdstobbe carlk Bioinformatics
	NetworkBLAST: comparative analysis of protein networks. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 4. (15 February 2008), pp. 594-596. by Maxim Kalaev, Mike Smoot, Trey Ideker, Roded Sharan posted to computational_method network_comparison by chica on 2009-08-04 09:29:47 as along with 7 people and 1 group megraw giovenko guhjy grahamc laughcry barriot smgomez GomezLab
	Modeling cellular machinery through biological network comparison. [My Copy] Nature biotechnology, Vol. 24, No. 4. (06 April 2006), pp. 427-433. by Roded Sharan, Trey Ideker posted to interaction_network interaction_prediction network_evolution protein_function_prediction by chica on 2009-07-15 20:59:13 as along with 22 people and 1 group akshayk sergiun cswinburne kaarsinogen isimpson tmmurali kuhn tuck yas balajis wnpx ma_ko gurkanbebek koller gcalda grahamc massivemayhem karfunkel mingzhi vietanh0 cdeane carlk T_lab
	Protein networks in disease. [My Copy] Genome research, Vol. 18, No. 4. (1 April 2008), pp. 644-652. by Trey Ideker, Roded Sharan posted to disease interaction_network by chica on 2009-07-01 14:28:55 as along with 27 people frohike shikin carlk isimpson saket zufar kaarsinogen giovenko guhjy balicea tmmurali Borelli jwdietrich bootsy nedwards roys mclarenv phoenixzxl brianb schuylrp jfr paolomarcatili gracio thomaskelder ptrobajo raiyar zwang

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coevolution	24
network_evolution	23
interaction_evolution	16
signalling_network	15
computational_method	15
interactome	10
interaction_network	10
pfalciparum	10
protein_interaction	9
interaction_prediction	8
linear_motif	8
protein_evolutionary_rate	7
protein_complex	7
database	7
phylogenetics	6
network_module	6
evolvability	6
yeast	6
interaction_interface	5
protein_function_prediction	5
protein_evolution	5
robustness	4
interolog	4
network_alignment	4
malaria	4
disorder	4
transcriptional_network	3
yeast_to_hybrid	3
data_quality	3
duplication	3
network_comparison	3
human	3
cooperativity	3
essenciality	3
experimental_method	3
selection	3
phylogenetic_profile	2
evolutionary_model	2
sequence-based_method	2
network_reconstruction	2
discovery_pipeline	2
synthetic_biology	2
benchmark	2
linear_motif_evolution	2
multiple_alignment	2
linear_pathways	2
specificity	2
network_topology	2
within_gene_coevo	2
neutral_evolution	2
mammalian	2
comparative_method	2
cell_cycle	2
drosophila	2
apicomplexa	2
mapk	2
maximum_likelihood	2
cancer	2
domain_domain_interaction	2
application	2
sorting	2
gene_expression	2
tap_purification	1
molecular_evolution	1
choanoflagellate	1
diabetes	1
cellular_machine	1
proteome	1
evolutionary_noise	1
proteomic_study	1
structural_study	1
sumoylation	1
thermodynamics	1
cell_growth	1
wnt	1
geographic_distribution	1
significance	1
influenza	1
protein_function	1
enzyme_evolution	1
clusters	1
structural_homology_modelling	1
probabilistic_model	1
disease	1
archaea	1
homomer	1
interdomain_interaction	1
socio_economical_study	1
homeostasis	1
gene_network	1
evolutionary_rate	1
drosophila_phylogeny	1
mapk_signalling_network	1
profile	1
parsimony	1
dynamics_modelling	1
mirror__tree	1
bacteria	1
non-homogeneus_models	1
genome_database	1
pairwise_alignment	1
plasmodium	1
jnk	1
protein_synthesis	1
raf	1
transcriptome	1
cell_regulation	1
cytochrome	1
lethality	1
src_famiy	1
comparative_proteomics	1
linear_motif_alignment	1
tree_comparison	1
receptor_ligand_coevolution	1
functional_overlap_paralogous	1
network_linkage	1
tyrosine_phosphorylation	1
conservation_score	1
models	1
transient_interactions	1
multidomain_protein	1
modular_interaction	1
codon_substitution_models	1
surface_proteins	1
folding	1
complex_organization	1
contrast_method	1
centrality	1
systems_biology	1
low_complexity	1
linear_motif_context	1
go_annotation	1
physiological_states	1
prediction_tool	1
feedback	1
high_throughput	1
genome	1
interaction_mechanism	1
distance_matrix	1
connectivity	1
drug_resistance	1
cooption_host_proteins	1
phosphorylation	1
quaternary_structure	1
expression_pattern	1
network_theory	1

chica's Ideker:T [7 articles] Export

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