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choonpeng's bioinformatics [13 articles]

Recent papers added to choonpeng's library classified by the tag bioinformatics. You can also see everyone's bioinformatics.
  • What determines protein folding type? An investigation of intrinsic structural properties and its implications for understanding folding mechanisms.
    J Mol Biol, Vol. 370, No. 3. (13 July 2007), pp. 439-448.
    by BG Ma, LL Chen, HY Zhang
    posted to bioinformatics protein-folding by choonpeng on 2007-12-22 06:35:29 as read
  • Predicting Allosteric Communication in Myosin via a Pathway ofConserved Residues
    Journal of Molecular Biology, Vol. In Press, Accepted Manuscript
    by Susan Tang, Jung-Chi Liao, Alexander R Dunn, Russ B Altman, James A Spudich, Jeanette P Schmidt
  • Search for folding nuclei in native protein structures.
    Bioinformatics, Vol. 21 Suppl 1 (June 2005)
    posted to bioinformatics protein-folding by choonpeng on 2007-05-10 06:12:18 as ***
  • Local complexity of amino acid interactions in a protein core.
    Proc Natl Acad Sci U S A, Vol. 101, No. 1. (6 January 2004), pp. 111-116.
    by RK Jain, R Ranganathan
  • iPfam: visualization of protein-protein interactions in PDB at domain and amino acid resolutions
    Bioinformatics, Vol. 21, No. 3. (01 February 2005), 410.
    by Robert D Finn, Mhairi Marshall, Alex Bateman
  • Rapid protein domain assignment from amino acid sequence using predicted secondary structure.
    Protein Sci, Vol. 11, No. 12. (December 2002), pp. 2814-2824.
    by RL Marsden, LJ McGuffin, DT Jones
    posted to bioinformatics by choonpeng on 2007-04-04 01:56:49 as ***
  • LFM-Pro: A Tool for Detecting Significant Local Structural Sites in Proteins.
    Bioinformatics (19 January 2007)
    by Ahmet Sacan, Ozgur Ozturk, Hakan Ferhatosmanoglu, Yusu Wang
    posted to bioinformatics protein-organization by choonpeng on 2007-04-03 10:11:45 as ***
  • Evolutionarily Conserved Pathways of Energetic Connectivity in Protein Families
    Science, Vol. 286, No. 5438. (08 October 1999), pp. 295-299.
    by Steve W Lockless, Rama Ranganathan
  • Determination of network of residues that regulate allostery in protein families using sequence analysis.
    Protein Sci, Vol. 15, No. 2. (February 2006), pp. 258-268.
    by RI Dima, D Thirumalai
  • Modeling the Evolution of Protein Domain Architectures Using Maximum Parsimony
    Journal of Molecular Biology, Vol. 366, No. 1. (9 February 2007), pp. 307-315.
    by Jessica H Fong, Lewis Y Geer, Anna R Panchenko, Stephen H Bryant
  • Prediction of protein-protein interactions using random decision forest framework.
    Bioinformatics, Vol. 21, No. 24. (15 December 2005), pp. 4394-4400.
    by XW Chen, M Liu
  • An integrated approach to the prediction of domain-domain interactions
    BMC Bioinformatics, Vol. 7, No. 1. (2006)
    by Hyunju Lee, Minghua Deng, Fengzhu Sun, Ting Chen
  • Co-evolutionary Analysis of Domains in Interacting Proteins Reveals Insights into Domain-Domain Interactions Mediating Protein-Protein Interactions
    Journal of Molecular Biology, Vol. 362, No. 4. (29 September 2006), pp. 861-875.
    by Raja Jothi, Praveen F Cherukuri, Asba Tasneem, Teresa M Przytycka
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