choonpeng's protein-interaction [87 articles] Export

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	Coupled Stochastic Spatial and Non-Spatial Simulations of ErbB1 Signaling Pathways Demonstrate the Importance of Spatial Organization in Signal Transduction [My Copy] PLoS ONE, Vol. 4, No. 7. (23 July 2009), e6316. by Michelle N. Costa, Krishnan Radhakrishnan, Bridget S. Wilson, Dionisios G. Vlachos, Jeremy S. Edwards posted to signaling protein-interaction kinetics diffusion by choonpeng on 2009-08-13 06:08:02 as
	Calculating enzyme kinetic parameters from protein structures. [My Copy] Biochemical Society transactions, Vol. 36, No. Pt 1. (February 2008), pp. 51-54. by M. Stein, R. R. Gabdoulline, R. C. Wade posted to kinetics protein-interaction by choonpeng on 2009-05-04 07:05:02 as
	Simulation of the diffusional association of barnase and barstar [My Copy] Vol. 72, No. 5. (1 May 1997), pp. 1917-1929. by R. R. Gabdoulline, R. C. Wade posted to kinetics methodology protein-interaction by choonpeng on 2009-05-04 06:48:27 as along with 1 person Martin8223
	Bridging from molecular simulation to biochemical networks. [My Copy] Curr Opin Struct Biol, Vol. 17, No. 2. (April 2007), pp. 166-172. by M. Stein, R. R. Gabdoulline, R. C. Wade posted to kinetics protein-interaction review by choonpeng on 2009-04-30 01:55:49 as along with 9 people and 1 group anuragsethi oteri ocs aqeel Borelli cmmorel julius ras higueruelo Structural Biology Group TorVergata
	Dynamic strength of molecularly bonded surfaces. [My Copy] The Journal of chemical physics, Vol. 125, No. 19. (21 November 2006) by F. Li, D. Leckband posted to methodology protein-interaction by choonpeng on 2009-04-16 09:51:05 as
	Is cell rheology governed by nonequilibrium-to-equilibrium transition of noncovalent bonds? [My Copy] Biophysical journal, Vol. 95, No. 12. (15 December 2008), pp. 5719-5727. by F. Chowdhury, S. Na, O. Collin, et al.B. Tay, F. Li, T. Tanaka, D. E. Leckband, N. Wang posted to protein-interaction by choonpeng on 2009-04-16 09:46:15 as along with 1 group Reunions Biblio Spectro-IAB
	Molecular simulations of lipid mediated protein-protein interactions [My Copy] Biophys. J. (16 May 2008), biophysj.107.124164. by Frederick J. de Meyer, Maddalena Venturoli, Berend Smit posted to coarse-grained protein-interaction transmembrane by choonpeng on 2008-12-18 05:31:57 as along with 3 people and 1 group oteri paulschlesinger agrossfield Structural Biology Group TorVergata
	Solution Structure and Sugar-Binding Mechanism of Mouse Latrophilin-1 RBL: a 7TM Receptor-Attached Lectin-Like Domain [My Copy] Structure, Vol. 16, No. 6. (11 June 2008), pp. 944-953. by Ioannis Vakonakis, Tobias Langenhan, Simone Prömel, Andreas Russ, Iain D. Campbell posted to protein-interaction by choonpeng on 2008-06-11 10:02:32 as
	DisProt: the Database of Disordered Proteins. [My Copy] Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007) by M. Sickmeier, J. A. Hamilton, T. LeGall, et al.V. Vacic, M. S. Cortese, A. Tantos, B. Szabo, P. Tompa, J. Chen, V. N. Uversky, Z. Obradovic, A. K. Dunker posted to protein-folding protein-interaction web-server by choonpeng on 2008-05-30 06:37:27 as along with 4 people carlosjavierna chad_davis higueruelo allmensch
	Protein-Protein Interaction Regulates Proteins' Mechanical Stability. [My Copy] Journal of molecular biology (28 March 2008) by Yi Cao, Teri Yoo, Shulin Zhuang, Hongbin Li posted to cell-adhesion protein-interaction protein-mechanics single-molecule-methods by choonpeng on 2008-04-27 12:28:26 as along with 2 people devinli imtechnology
	Dynamic property is a key determinant for protein-protein interactions [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 70, No. 4. (2008), pp. 1323-1331. by Hongjun Bai, Wenzhe Ma, Shiyong Liu, Luhua Lai posted to protein-interaction by choonpeng on 2008-02-19 06:49:30 as
	Comprehensive statistical analysis of residues interaction specificity at protein-protein interfaces. [My Copy] Proteins, Vol. 67, No. 4. (1 June 2007), pp. 1060-1077. by A. Anashkina, E. Kuznetsov, N. Esipova, V. Tumanyan posted to protein-interaction by choonpeng on 2008-01-13 12:37:17 as along with 2 people higueruelo bicko
	Role of linkers in communication between protein modules [My Copy] Current Opinion in Chemical Biology, Vol. 4, No. 1. (1 February 2000), pp. 22-27. by Rajesh S. Gokhale, Chaitan Khosla posted to modular protein-interaction review signaling by choonpeng on 2008-01-13 12:02:26 as
	Structural and mechanistic analysis of protein interactions in module 3 of the 6-deoxyerythronolide B synthase. [My Copy] Chem Biol, Vol. 14, No. 8. (August 2007), pp. 931-943. by Y. Tang, A. Y. Chen, C. Y. Kim, D. E. Cane, C. Khosla posted to modular protein-interaction by choonpeng on 2008-01-13 11:52:09 as
	Dynamic personalities of proteins [My Copy] Nature, Vol. 450, No. 7172. (12 December 2007), pp. 964-972. by Katherine Henzler-Wildman, Dorothee Kern posted to protein-interaction review by choonpeng on 2007-12-18 08:05:47 as along with 17 people and 1 group Diego_Prada xdeupi viktor21614 ruvido barry pavanghatty chad_davis allmensch rsantana cjeans sobolevnrm wilbur mijam kjell phoenixzxl higueruelo GeeSharpMinor baker-group
	Molecular Crowding Inhibits Intramolecular Breathing Motions in Proteins [My Copy] Journal of Molecular Biology, Vol. 375, No. 2. (11 January 2008), pp. 529-546. by Lee Makowski, Diane J. Rodi, Suneeta Mandava, David D. Minh, David B. Gore, Robert F. Fischetti posted to protein-interaction protein-stability by choonpeng on 2007-12-08 14:11:05 as along with 1 person operon
	Signaling complexes: biophysical constraints on intracellular communication. [My Copy] Annu Rev Biophys Biomol Struct, Vol. 27 (1998), pp. 59-75. by D. Bray posted to protein-interaction review by choonpeng on 2007-10-05 09:34:59 as
	Conformational spread: the propagation of allosteric states in large multiprotein complexes. [My Copy] Annu Rev Biophys Biomol Struct, Vol. 33 (2004), pp. 53-73. by D. Bray, T. Duke posted to protein-interaction review by choonpeng on 2007-10-05 09:32:59 as along with 3 people leemary4 cactus evanse
	A more complete, complexed and structured interactome. [My Copy] Curr Opin Struct Biol (14 June 2007) by Damien Devos, Robert B B. Russell posted to protein-interaction review by choonpeng on 2007-10-05 05:09:47 as along with 4 people chad_davis balicea skhadar ruvido
	Optimization of electrostatic interactions in protein-protein complexes. [My Copy] Biophysical journal, Vol. 93, No. 10. (15 November 2007), pp. 3340-3352. by K. Brock, K. Talley, K. Coley, P. Kundrotas, E. Alexov posted to protein-interaction by choonpeng on 2007-09-04 13:18:24 as along with 4 people and 1 group flbarroso timg dfgreen sobolevnrm baker-group
	Forced detachment of the CD2-CD58 complex. [My Copy] Biophys J, Vol. 84, No. 4. (April 2003), pp. 2223-2233. by M. V. Bayas, K. Schulten, D. Leckband posted to force-probe-md protein-folding protein-interaction salt-bridge by choonpeng on 2007-09-04 11:11:08 as
	WATGEN: An algorithm for modeling water networks at protein-protein interfaces [My Copy] Journal of Computational Chemistry, Vol. 28, No. 14. (2007), pp. 2241-2251. by Huynh-Hoa Bui, Alexandra J. Schiewe, Ian S. Haworth posted to protein-interaction by choonpeng on 2007-08-21 01:57:45 as along with 2 people oceanwind Lombardo_7
	Hot spots-A review of the protein-protein interface determinant amino-acid residues. [My Copy] Proteins, Vol. 68, No. 4. (1 June 2007), pp. 803-812. by Irina S S. Moreira, Pedro A A. Fernandes, Maria J J. Ramos posted to protein-interaction by choonpeng on 2007-08-09 08:07:17 as along with 4 people bicko IrinaMoreira higueruelo timg
	How Different are Structurally Flexible and Rigid Binding Sites? Sequence and Structural Features Discriminating Proteins that Do and Do not Undergo Conformational Change upon Ligand Binding. [My Copy] J Mol Biol (29 September 2006) by Kannan Gunasekaran, Ruth Nussinov posted to protein-interaction by choonpeng on 2007-08-07 05:13:35 as along with 10 people and 1 group aqeel reyez BragilMassoud dgruiz radestock lna yongzhao weisblum higueruelo nickolay TSRI_MGL
	Folding funnels, binding funnels, and protein function. [My Copy] Protein Sci, Vol. 8, No. 6. (June 1999), pp. 1181-1190. by C. J. Tsai, S. Kumar, B. Ma, R. Nussinov posted to protein-folding protein-interaction review by choonpeng on 2007-07-17 06:52:07 as along with 2 people lna robert
	How similar are protein folding and protein binding nuclei? Examination of vibrational motions of energy hot spots and conserved residues. [My Copy] Biophys J, Vol. 88, No. 3. (March 2005), pp. 1552-1559. by T. Haliloglu, O. Keskin, B. Ma, R. Nussinov posted to protein-folding protein-interaction by choonpeng on 2007-07-15 05:38:04 as along with 4 people and 2 groups barry baaden aqeel eweaver structural_bioinformatics Bioinformatics
	Structures in systems biology. [My Copy] Current opinion in structural biology, Vol. 17, No. 3. (14 June 2007), pp. 378-384. by Pedro Beltrao, Christina Kiel, Luis Serrano posted to protein-interaction by choonpeng on 2007-07-10 01:23:58 as along with 5 people pekrau agomez pauldobson dullhunk bicko
	Organization and functions of interacting domains for signaling by protein-protein interactions. [My Copy] Sci STKE, Vol. 2003, No. 209. (18 November 2003) by E. Buck, R. Iyengar posted to protein-interaction signaling by choonpeng on 2007-06-29 05:53:59 as along with 1 person boris_aguilar
	Network analysis of protein dynamics [My Copy] FEBS Letters, Vol. 581, No. 15. (19 June 2007), pp. 2776-2782. by C. Bode, I. Kovacs, M. Szalay, R. Palotai, T. Korcsmaros, P. Csermely posted to protein-interaction review by choonpeng on 2007-06-12 09:56:20 as along with 4 people mjbradle george_g jlh64 Diego_Prada
	SCOPPI: a structural classification of protein-protein interfaces. [My Copy] Nucleic acids research, Vol. 34, No. Database issue. (1 January 2006) by Christof Winter, Andreas Henschel, Wan Kyu K. Kim, Michael Schroeder posted to protein-interaction web-server by choonpeng on 2007-06-05 04:02:24 as along with 10 people and 4 groups winterschlaefer higueruelo sjcockell ana kuhn bicko chad_davis marcius Evangelia kintoki structural_bioinformatics Bioinformatics BioinfoCIPF SGU-CIPF
	Interaction preferences across protein-protein interfaces of obligatory and non-obligatory components are different. [My Copy] BMC Struct Biol, Vol. 5 (16 August 2005) by S. De, O. Krishnadev, N. Srinivasan, N. Rekha posted to protein-interaction by choonpeng on 2007-06-05 04:00:35 as along with 4 people bicko medic0747 higueruelo marti
	Stereospecific interactions of proline residues in protein structures and complexes. [My Copy] J Mol Biol, Vol. 331, No. 4. (22 August 2003), pp. 925-940. by R. Bhattacharyya, P. Chakrabarti posted to protein-interaction by choonpeng on 2007-06-04 05:20:29 as
	Interaction geometry involving planar groups in protein-protein interfaces [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 67, No. 1. (2007), pp. 84-97. by Rudra P. Saha, Rajasri Bhattacharyya, Pinak Chakrabarti posted to protein-interaction by choonpeng on 2007-06-03 08:59:07 as along with 2 people bicko higueruelo
	Reading protein modifications with interaction domains [My Copy] Nature Reviews Molecular Cell Biology, Vol. 7, No. 7., pp. 473-483. by Bruce T. Seet, Ivan Dikic, Ming-Ming Zhou, Tony Pawson posted to modular protein-interaction by choonpeng on 2007-06-01 14:15:00 as along with 4 people Yoko laurabailey cjeans mingzhi
	Analysis of homodimeric protein interfaces by graph-spectral methods. [My Copy] Protein Eng, Vol. 15, No. 4. (April 2002), pp. 265-277. by K. V. Brinda, N. Kannan, S. Vishveshwara posted to protein-interaction by choonpeng on 2007-05-29 02:13:03 as along with 2 people bicko mz2
	Insights into the quaternary association of proteins through structure graphs: a case study of lectins. [My Copy] Biochem J, Vol. 391, No. Pt 1. (1 October 2005), pp. 1-15. by K. V. Brinda, A. Surolia, S. Vishveshwara posted to protein-interaction by choonpeng on 2007-05-29 02:01:09 as along with 1 person bicko
	Uncovering Network Systems Within Protein Structures [My Copy] Journal of Molecular Biology, Vol. 334, No. 4. (05 December 2003), pp. 781-791. by Lesley H. Greene, Victoria A. Higman posted to protein-interaction by choonpeng on 2007-05-28 14:03:46 as
	Protein-protein interactions: structurally conserved residues distinguish between binding sites and exposed protein surfaces. [My Copy] Proc Natl Acad Sci U S A, Vol. 100, No. 10. (13 May 2003), pp. 5772-5777. by B. Ma, T. Elkayam, H. Wolfson, R. Nussinov posted to protein-interaction by choonpeng on 2007-05-28 13:58:29 as along with 10 people and 2 groups tbinbal dkoveal mdimmic barry bicko lyongu nickolay cjeans carlescorbi ladab structural_bioinformatics Bioinformatics
	Structure networks of <I>E. coli</I> glutaminyl-tRNA synthetase: Effects of ligand binding [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2007), NA. by R. Sathyapriya, Saraswathi Vishveshwara posted to protein-interaction protein-stability by choonpeng on 2007-05-21 07:33:06 as along with 1 person naitsabes
	Characterization of interfacial solvent in protein complexes and contribution of <I>wet spots</I> to the interface description [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 67, No. 4. (2007), pp. 1087-1095. by Joan Teyra, M. T. Pisabarro posted to protein-interaction solvent-effects by choonpeng on 2007-05-21 07:20:20 as along with 4 people bicko marti jteyra Lombardo_7
	Topology of small-world networks of protein-protein complex structures. [My Copy] Bioinformatics, Vol. 21, No. 8. (15 April 2005), pp. 1311-1315. by A. Del-Sol, H. Fujihashi, P. O'Meara posted to protein-interaction by choonpeng on 2007-05-13 10:11:14 as along with 2 people bicko higueruelo
	On Itinerant Water Molecules and Detectability of Protein-Protein Interfaces through Comparative Analysis of Homologues [My Copy] Journal of Molecular Biology, Vol. 369, No. 2. (1 June 2007), pp. 584-595. by I. Mihalek, I. Res, O. Lichtarge posted to protein-interaction by choonpeng on 2007-05-08 16:02:17 as
	Small-world network approach to identify key residues in protein-protein interaction. [My Copy] Proteins, Vol. 58, No. 3. (15 February 2005), pp. 672-682. by A. Del-Sol, P. O'Meara posted to protein-interaction by choonpeng on 2007-04-19 03:11:41 as along with 2 people bicko higueruelo
	Survey of the geometric association of domain-domain interfaces [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 61, No. 4. (2005), pp. 1075-1088. by Wan K. Kim, Jon C. Ison posted to protein-interaction protein-domains by choonpeng on 2007-04-12 11:40:48 as along with 1 person j3xucite
	A dissection of specific and non-specific protein-protein interfaces. [My Copy] J Mol Biol, Vol. 336, No. 4. (27 February 2004), pp. 943-955. by R. P. Bahadur, P. Chakrabarti, F. Rodier, J. Janin posted to protein-interaction by choonpeng on 2007-04-11 11:11:43 as along with 5 people bicko drastic marti higueruelo kintoki
	The effect of protein complexation on the mechanical stability of im9. [My Copy] Biophys J, Vol. 92, No. 9. (1 May 2007) by E. Hann, N. Kirkpatrick, C. Kleanthous, D. A. Smith, S. E. Radford, D. J. Brockwell posted to protein-interaction protein-mechanics single-molecule-methods by choonpeng on 2007-04-11 08:20:09 as
	Disruption of Interdomain Interactions via Partial Calcium Occupancy of Calmodulin [My Copy] Biochemistry, Vol. 46, No. 15. (17 April 2007), pp. 4580-4588. by C. B. Boschek, T. C. Squier, D. J. Bigelow posted to protein-interaction protein-domains by choonpeng on 2007-04-10 16:25:55 as
	iPfam: visualization of protein-protein interactions in PDB at domain and amino acid resolutions. [My Copy] Bioinformatics (Oxford, England), Vol. 21, No. 3. (1 February 2005), pp. 410-412. by Robert D. Finn, Mhairi Marshall, Alex Bateman posted to bioinformatics protein-interaction web-server protein-domains by choonpeng on 2007-04-07 05:28:00 as along with 8 people and 2 groups kiekyon kshameer mdimmic barry chad_davis massivemayhem antonkratz kintoki structural_bioinformatics Bioinformatics
	SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces. [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (2 March 2006) by Joan Teyra, Andreas Doms, Michael Schroeder, M Teresa T. Pisabarro posted to protein-interaction web-server by choonpeng on 2007-03-27 07:57:22 as along with 9 people and 2 groups timg flbarroso HawkinsJohnC higueruelo jwm bicko chad_davis jteyra Lombardo_7 Radiation_Damage Stressosome
	The many faces of protein-protein interactions: A compendium of interface geometry. [My Copy] PLoS computational biology, Vol. 2, No. 9. (29 September 2006), e124. by Wan Kyu K. Kim, Andreas Henschel, Christof Winter, Michael Schroeder posted to protein-interaction by choonpeng on 2007-03-27 07:55:43 as along with 10 people and 2 groups winterschlaefer zdai raik bicko chad_davis marcius Evangelia wilbur allmensch marck BioinfoCIPF SGU-CIPF

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protein-folding	177
modular	117
coarse-grained	111
review	90
protein-interaction	87
protein-domains	83
force-probe-md	64
mechanotransduction	63
flagellar	61
methodology	52
protein-translocation	48
single-molecule-methods	48
allostery	44
cell-adhesion	41
signaling	41
high-t-md	40
ttss	29
nma	28
mechanical-unfolding	26
transmembrane	26
integrin	25
solvent-effects	24
protein-mechanics	22
books	21
protein-stability	19
pca	18
chaperone	16
cytoskeletal-dynamics	16
folding-nucleus	16
cooperativity	15
folding-intermediate	15
web-server	15
go-model	14
bioinformatics	13
ensemble	12
implicit-solvent	12
theoretical	11
software	10
self-assembly	9
denatured-state	8
crowding	7
diffusion	7
multi-scale	7
protein-degradation	7
ig-like	6
kinetics	6
computer-programming	5
protein-secretion	5
salt-bridge	5
protein-dynamics	4
structure-validation	3
science-presentation	1
science-writing	1

choonpeng's protein-interaction [87 articles] Export

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