choonpeng's protein-domains [83 articles] Export

Recent papers added to choonpeng's library classified by the tag protein-domains. You can also see everyone's protein-domains.

Hide details

	Control of protein functional dynamics by peptide linkers. [My Copy] Biopolymers, Vol. 80, No. 6. (2005), pp. 736-746. by Willy Wriggers, Sugoto Chakravarty, Patricia A. Jennings posted to protein-domains protein-dynamics by choonpeng on 2009-07-31 09:01:01 as
	Design of protein function leaps by directed domain interface evolution [My Copy] Proceedings of the National Academy of Sciences (29 April 2008), 0801097105. by Jin Huang, Akiko Koide, Koki Makabe, Shohei Koide posted to protein-domains by choonpeng on 2008-05-07 02:56:16 as along with 5 people GeeSharpMinor cmzmasek zwang marck phoenixzxl
	Structure Prediction of Domain Insertion Proteins from Structures of Individual Domains [My Copy] Structure, Vol. 16, No. 4. (8 April 2008), pp. 513-527. by Monica Berrondo, Marc Ostermeier, Jeffrey J. Gray posted to methodology protein-domains by choonpeng on 2008-04-10 14:33:38 as along with 2 people zwang raik
	A multidomain outer membrane protein from Pasteurella multocida: Modelling and simulation studies of PmOmpA. [My Copy] Biochim Biophys Acta (16 August 2007) by Timothy Carpenter, Syma Khalid, Mark S P S. Sansom posted to protein-domains transmembrane by choonpeng on 2008-04-07 02:21:34 as along with 1 person IrinaMoreira
	The Modular Organization of Domain Structures: Insights into Protein–Protein Binding [My Copy] PLoS Computational Biology, Vol. 3, No. 12. (1 December 2007), e239. by Del, Pablo Carbonell posted to protein-domains by choonpeng on 2008-01-13 01:24:41 as along with 9 people bicko chad_davis grahamc cjeans zwang niallhaslam biehl marti carlk
	Interpretation of NMR relaxation properties of Pin1, a two-domain protein, based on Brownian dynamic simulations. [My Copy] J Biomol NMR, Vol. 29, No. 1. (May 2004), pp. 21-35. by P. Bernadó, M. X. Fernandes, D. M. Jacobs, K. Fiebig, J. García de la Torre, M. Pons posted to coarse-grained protein-domains by choonpeng on 2007-12-18 04:50:36 as
	Peptide binding induces large scale changes in inter-domain mobility in human Pin1. [My Copy] J Biol Chem, Vol. 278, No. 28. (11 July 2003), pp. 26174-26182. by D. M. Jacobs, K. Saxena, M. Vogtherr, P. Bernado, M. Pons, K. M. Fiebig posted to protein-domains by choonpeng on 2007-12-18 04:36:12 as
	Structural assembly of multidomain proteins and protein complexes guided by the overall rotational diffusion tensor. [My Copy] J Am Chem Soc, Vol. 129, No. 25. (27 June 2007), pp. 7894-7902. by Y. Ryabov, D. Fushman posted to modular protein-domains by choonpeng on 2007-12-18 04:27:27 as along with 1 person IrinaMoreira
	Structural characterization of flexible proteins using small-angle X-ray scattering. [My Copy] J Am Chem Soc, Vol. 129, No. 17. (2 May 2007), pp. 5656-5664. by P. Bernadó, E. Mylonas, M. V. Petoukhov, M. Blackledge, D. I. Svergun posted to methodology protein-domains by choonpeng on 2007-11-06 07:13:29 as along with 1 person higueruelo
	Analysis of X-ray and neutron scattering from biomacromolecular solutions [My Copy] Current Opinion in Structural Biology In Carbohydrates and glycoconjugates / Biophysical methods, Vol. 17, No. 5. (October 2007), pp. 562-571. by Maxim V. Petoukhov, Dmitri I. Svergun posted to modular protein-folding review protein-domains by choonpeng on 2007-11-06 07:10:43 as along with 3 people and 1 group dgront sobolevnrm CameronNeylon baker-group
	The LDL receptor: how acid pulls the trigger. [My Copy] Trends Biochem Sci, Vol. 30, No. 6. (June 2005), pp. 309-317. by N. Beglova, S. C. Blacklow posted to modular review protein-domains by choonpeng on 2007-08-21 03:52:20 as along with 1 person baaden
	STRUCTURE AND PHYSIOLOGIC FUNCTION OF THE LOW-DENSITY LIPOPROTEIN RECEPTOR. [My Copy] Annu Rev Biochem, Vol. 74 (7 July 2005), pp. 535-562. by Hyesung Jeon, Stephen C C. Blacklow posted to modular review protein-domains by choonpeng on 2007-08-21 03:48:34 as along with 1 person baaden
	Ligand-Induced Structural Transitions in ErbB Receptor Extracellular Domains [My Copy] Structure, Vol. 15, No. 8. (14 August 2007), pp. 942-954. by Jessica P. Dawson, Zimei Bu, Mark A. Lemmon posted to modular protein-domains by choonpeng on 2007-08-15 09:36:34 as
	The solution and crystal structures of a module pair from the Staphylococcus aureus-binding site of human fibronectin--a tale with a twist. [My Copy] J Mol Biol, Vol. 368, No. 3. (4 May 2007), pp. 833-844. by E. Rudiño-Piñera, R. B. Ravelli, G. M. Sheldrick, et al.M. H. Nanao, V. V. Korostelev, J. M. Werner, U. Schwarz-Linek, J. R. Potts, E. F. Garman posted to modular protein-domains by choonpeng on 2007-08-03 04:19:15 as along with 1 person and 2 groups jwm Radiation_Damage Stressosome
	An unusual cytokine:Ig-domain interaction revealed in the crystal structure of leukemia inhibitory factor (LIF) in complex with the LIF receptor. [My Copy] Proc Natl Acad Sci U S A (24 July 2007) by Trevor Huyton, Jian-Guo G. Zhang, Cindy S S. Luo, et al.Mei-Zhen Z. Lou, Douglas J J. Hilton, Nicos A A. Nicola, Thomas P J P. Garrett posted to modular protein-domains by choonpeng on 2007-07-31 18:57:25 as
	Interdomain tilt angle determines integrin-dependent function of the ninth and tenth FIII domains of human fibronectin. [My Copy] J Biol Chem, Vol. 279, No. 53. (31 December 2004), pp. 55995-56003. by H. Altroff, R. Schlinkert, C. F. van der Walle, et al.A. Bernini, I. D. Campbell, J. M. Werner, H. J. Mardon posted to modular protein-domains by choonpeng on 2007-07-31 14:49:21 as
	Characterization of the folding landscape of monomeric lactose repressor: quantitative comparison of theory and experiment. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 41. (11 October 2005), pp. 14569-14574. by P. Das, C. J. Wilson, G. Fossati, P. Wittung-Stafshede, K. S. Matthews, C. Clementi posted to coarse-grained go-model protein-folding protein-domains by choonpeng on 2007-07-30 05:16:11 as
	Structural and Functional Properties of the Human Notch-1 Ligand Binding Region [My Copy] Structure, Vol. 12, No. 12. (December 2004), pp. 2173-2183. by Sophie Hambleton, Najl V. Valeyev, Andreas Muranyi, et al.Vroni Knott, Jorn M. Werner, Andrew J. Mcmichael, Penny A. Handford, Kristina A. Downing posted to modular protein-domains by choonpeng on 2007-07-28 08:48:36 as
	Rigid Conformation of an Immunoglobulin Domain Tandem Repeat in the A-band of the Elastic Muscle Protein Titin [My Copy] Journal of Molecular Biology, Vol. 371, No. 2. (10 August 2007), pp. 469-480. by Simone Muller, Stephan Lange, Mathias Gautel, Matthias Wilmanns posted to mechanotransduction modular protein-domains by choonpeng on 2007-07-18 00:41:37 as
	Modular architecture of protein structures and allosteric communications: potential implications for signaling proteins and regulatory linkages [My Copy] Genome biology, Vol. 8, No. 5. (25 May 2007), R92. by Antonio Del-Sol, Marcos J. Arauzo-Bravo, Dolors A. Moya, Ruth Nussinov posted to protein-domains signaling by choonpeng on 2007-06-14 02:55:48 as along with 3 people and 2 groups barry bicko echcram structural_bioinformatics Bioinformatics
	The open state of human topoisomerase I as probed by molecular dynamics simulation. [My Copy] Nucleic Acids Res, Vol. 35, No. 9. (2007), pp. 3032-3038. by G. Chillemi, A. Bruselles, P. Fiorani, S. Bueno, A. Desideri posted to protein-domains by choonpeng on 2007-05-16 05:24:47 as along with 2 people and 1 group A_Coletta_Thesis oteri Structural Biology Group TorVergata
	Similar binding sites and different partners: implications to shared proteins in cellular pathways. [My Copy] Structure, Vol. 15, No. 3. (March 2007), pp. 341-354. by O. Keskin, R. Nussinov posted to protein-domains signaling by choonpeng on 2007-05-04 17:42:03 as along with 3 people bicko higueruelo marti
	The Linker between SH2 and Kinase Domains Positively Regulates Catalysis of the Tec Family Kinases. [My Copy] Biochemistry (11 April 2007) by Raji E. Joseph, Lie Min, Amy H. Andreotti posted to allostery protein-domains by choonpeng on 2007-05-01 10:41:03 as
	The influence of interdomain interactions on the intradomain motions in yeast phosphoglycerate kinase: a molecular dynamics study. [My Copy] Biophys J, Vol. 92, No. 5. (1 March 2007), pp. 1709-1716. by E. Balog, M. Laberge, J. Fidy posted to cooperativity protein-domains by choonpeng on 2007-04-30 08:05:06 as
	Survey of the geometric association of domain-domain interfaces [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 61, No. 4. (2005), pp. 1075-1088. by Wan K. Kim, Jon C. Ison posted to protein-interaction protein-domains by choonpeng on 2007-04-12 11:40:48 as along with 1 person j3xucite
	Divergence of interdomain geometry in two-domain proteins. [My Copy] Structure (London, England : 1993), Vol. 14, No. 5. (May 2006), pp. 935-945. by J. H. Han, N. Kerrison, C. Chothia, S. A. Teichmann posted to protein-domains by choonpeng on 2007-04-12 11:34:49 as along with 4 people chica cjeans higueruelo gulkur
	Supra-domains: evolutionary units larger than single protein domains. [My Copy] J Mol Biol, Vol. 336, No. 3. (20 February 2004), pp. 809-823. by C. Vogel, C. Berzuini, M. Bashton, J. Gough, S. A. Teichmann posted to protein-domains by choonpeng on 2007-04-11 10:43:57 as along with 4 people martainn tjimenez Schmidtc tny
	Disruption of Interdomain Interactions via Partial Calcium Occupancy of Calmodulin [My Copy] Biochemistry, Vol. 46, No. 15. (17 April 2007), pp. 4580-4588. by C. B. Boschek, T. C. Squier, D. J. Bigelow posted to protein-interaction protein-domains by choonpeng on 2007-04-10 16:25:55 as
	iPfam: visualization of protein-protein interactions in PDB at domain and amino acid resolutions. [My Copy] Bioinformatics (Oxford, England), Vol. 21, No. 3. (1 February 2005), pp. 410-412. by Robert D. Finn, Mhairi Marshall, Alex Bateman posted to bioinformatics protein-interaction web-server protein-domains by choonpeng on 2007-04-07 05:28:00 as along with 8 people and 2 groups kiekyon kshameer mdimmic barry chad_davis massivemayhem antonkratz kintoki structural_bioinformatics Bioinformatics
	Folding of tandem-linked domains. [My Copy] Proteins (22 March 2007) by E Prabhu P. Raman, Valeri Barsegov, Dmitri K K. Klimov posted to coarse-grained protein-domains by choonpeng on 2007-03-29 02:48:04 as
	Global phylogeny determined by the combination of protein domains in proteomes. [My Copy] Mol Biol Evol, Vol. 23, No. 12. (December 2006), pp. 2444-2454. by M. Wang, G. Caetano-Anollés posted to protein-domains by choonpeng on 2007-03-27 07:46:46 as
	A model of interdomain mobility in a multidomain protein. [My Copy] J Am Chem Soc, Vol. 129, No. 11. (21 March 2007), pp. 3315-3327. by Y. E. Ryabov, D. Fushman posted to protein-domains by choonpeng on 2007-03-27 05:30:05 as along with 2 people rph IrinaMoreira
	Docking protein domains in contact space [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (21 June 2006), 310. by Stefano Lise, Alice Walker-Taylor, David T. Jones posted to protein-interaction protein-domains by choonpeng on 2007-03-27 05:17:47 as along with 4 people vavi bicko chad_davis martainn
	Chemical synthesis and spontaneous folding of a multidomain protein: anticoagulant microprotein S. [My Copy] Proc Natl Acad Sci U S A, Vol. 97, No. 26. (19 December 2000), pp. 14074-14078. by T. M. Hackeng, J. A. Fernandez, P. E. Dawson, S. B. Kent, J. H. Griffin posted to protein-folding protein-domains by choonpeng on 2007-03-27 05:15:57 as
	The folding and evolution of multidomain proteins. [My Copy] Nature reviews. Molecular cell biology, Vol. 8, No. 4. (April 2007), pp. 319-330. by J. H. Han, S. Batey, A. A. Nickson, S. A. Teichmann, J. Clarke posted to protein-folding protein-domains by choonpeng on 2007-03-27 05:14:32 as along with 8 people and 2 groups chica wiedenhoeft aalibes dchughes cjeans Jporci IrinaMoreira cmzmasek G4ID Genetics-of-Gambling
	Probing Protein Mechanics: Residue-Level Properties and Their Use in Defining Domains [My Copy] Biophys. J., Vol. 87, No. 3. (1 September 2004), pp. 1426-1435. by Isabelle Navizet, Fabien Cailliez, Richard Lavery posted to coarse-grained protein-domains by choonpeng on 2007-03-12 08:31:17 as along with 1 person aqeel
	Automatic domain decomposition of proteins by a Gaussian Network Model. [My Copy] Proteins, Vol. 57, No. 4. (1 December 2004), pp. 725-733. by S. Kundu, D. C. Sorensen, G. N. Phillips posted to protein-domains nma by choonpeng on 2007-03-09 00:10:02 as along with 1 person aqeel
	Fast Folding of the Two-domain Semliki Forest Virus Capsid Protein Explains Co-translational Proteolytic Activity, [My Copy] Journal of Molecular Biology, Vol. 338, No. 1. (16 April 2004), pp. 159-167. by Ignacio E. Sanchez, Manuel Morillas, Eva Zobeley, Thomas Kiefhaber, Rudi Glockshuber posted to protein-folding protein-domains by choonpeng on 2007-03-04 15:51:00 as along with 1 person saunders
	Multi-domain Proteins in the Three Kingdoms of Life: Orphan Domains and Other Unassigned Regions [My Copy] Journal of Molecular Biology, Vol. 348, No. 1. (22 April 2005), pp. 231-243. by Diana Ekman, Asa K. Bjorklund, Johannes Frey-Skott, Arne Elofsson posted to protein-domains by choonpeng on 2007-02-12 13:01:35 as along with 3 people and 2 groups wiedenhoeft ana tny structural_bioinformatics Bioinformatics
	Conformational Transitions of Adenylate Kinase: Switching by Cracking [My Copy] Journal of Molecular Biology, Vol. 366, No. 5. (9 March 2007), pp. 1661-1671. by Paul C. Whitford, Osamu Miyashita, Yaakov Levy, Jose N. Onuchic posted to coarse-grained allostery protein-domains by choonpeng on 2007-02-12 03:21:55 as along with 1 person operon
	Biophysical investigations of engineered polyproteins: implications for force data. [My Copy] Biophys J, Vol. 88, No. 3. (March 2005), pp. 2022-2029. by R. W. Rounsevell, A. Steward, J. Clarke posted to protein-folding single-molecule-methods protein-domains by choonpeng on 2007-01-29 02:40:00 as
	Allosteric Regulation of Hsp70 Chaperones Involves a Conserved Interdomain Linker [My Copy] J. Biol. Chem., Vol. 281, No. 50. (15 December 2006), pp. 38705-38711. by Markus Vogel, Matthias P. Mayer, Bernd Bukau posted to chaperone allostery protein-domains by choonpeng on 2007-01-27 07:54:38 as
	Two-way Interdomain Signal Transduction in Tetracycline Repressor [My Copy] Journal of Molecular Biology, Vol. 361, No. 2. (11 August 2006), pp. 382-389. by Sean E. Reichheld, Alan R. Davidson posted to allostery protein-domains by choonpeng on 2007-01-27 07:46:22 as
	Cooperative Folding in a Multi-domain Protein [My Copy] Journal of Molecular Biology, Vol. 349, No. 5. (24 June 2005), pp. 1045-1059. by Sarah Batey, Lucy G. Randles, Annette Steward, Jane Clarke posted to protein-folding cooperativity protein-domains by choonpeng on 2007-01-27 07:26:52 as
	Modeling the evolution of protein domain architectures using maximum parsimony. [My Copy] Journal of molecular biology, Vol. 366, No. 1. (9 February 2007), pp. 307-315. by Jessica H. Fong, Lewis Y. Geer, Anna R. Panchenko, Stephen H. Bryant posted to modular bioinformatics protein-domains by choonpeng on 2007-01-25 03:25:34 as along with 9 people and 3 groups martainn calderonv wiedenhoeft jameswasmuth icases marcius tny redelings zwang BioinfoCIPF SGU-CIPF TNT
	The modular logic of signaling proteins: building allosteric switches from simple binding domains [My Copy] Current Opinion in Structural Biology, Vol. 12, No. 1. (1 February 2002), pp. 61-68. by Wendell A. Lim posted to modular allostery protein-domains by choonpeng on 2007-01-24 10:36:51 as
	A topologically related singularity suggests a maximum preferred size for protein domains [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 66, No. 3. (2007), pp. 621-629. by Joseph P. Zbilut, Gek H. Chua, Arun Krishnan, et al.Cecilia Bossa, Kristian Rother, Charles L. Webber, Alessandro Giuliani posted to protein-domains by choonpeng on 2007-01-23 09:24:36 as along with 2 people cdeane Pao-Yang
	Prediction of structures of multidomain proteins from structures of the individual domains. [My Copy] Protein Sci (22 December 2006) by Andrew M M. Wollacott, Alexandre Zanghellini, Paul Murphy, David Baker posted to protein-interaction protein-domains by choonpeng on 2007-01-23 03:09:08 as along with 5 people dgront wouterboomsma zwang IrinaMoreira rph
	The evolution of domain arrangements in proteins and interaction networks. [My Copy] Cell Mol Life Sci, Vol. 62, No. 4. (February 2005), pp. 435-445. by E. Bornberg-Bauer, F. Beaussart, S. K. Kummerfeld, S. A. Teichmann, J. Weiner posted to protein-interaction modular protein-domains by choonpeng on 2007-01-19 07:39:24 as along with 4 people agustinarce cjeans cmzmasek gulkur
	The geometry of domain combination in proteins. [My Copy] J Mol Biol, Vol. 315, No. 4. (25 January 2002), pp. 927-939. by M. Bashton, C. Chothia posted to modular protein-domains by choonpeng on 2007-01-19 07:34:40 as along with 4 people martainn jameswasmuth Schmidtc tny

Note: You may cite this page as: http://www.citeulike.org/user/choonpeng/tag/protein-domains

Result page: 1 2 Next

protein-folding	177
modular	117
coarse-grained	111
review	90
protein-interaction	87
protein-domains	83
force-probe-md	64
mechanotransduction	63
flagellar	61
methodology	52
protein-translocation	48
single-molecule-methods	48
allostery	45
cell-adhesion	43
signaling	43
high-t-md	40
ttss	29
nma	28
transmembrane	27
integrin	26
mechanical-unfolding	26
solvent-effects	24
protein-mechanics	22
books	21
protein-stability	19
pca	18
chaperone	16
cytoskeletal-dynamics	16
folding-nucleus	16
cooperativity	15
folding-intermediate	15
web-server	15
go-model	14
bioinformatics	13
ensemble	12
implicit-solvent	12
theoretical	11
software	10
self-assembly	9
denatured-state	8
crowding	7
diffusion	7
multi-scale	7
protein-degradation	7
ig-like	6
kinetics	6
computer-programming	5
protein-secretion	5
salt-bridge	5
protein-dynamics	4
structure-validation	3
science-presentation	1
science-writing	1

choonpeng's protein-domains [83 articles] Export

choonpeng's tags