choonpeng's signaling [42 articles] Export

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	Adhesion signaling - crosstalk between integrins, Src and Rho. [My Copy] Journal of cell science, Vol. 122, No. Pt 8. (15 April 2009), pp. 1059-1069. by Stephan Huveneers, Erik H. Danen posted to signaling integrin by choonpeng on 2009-11-12 01:55:14 as along with 1 person guhjy
	Coupled Stochastic Spatial and Non-Spatial Simulations of ErbB1 Signaling Pathways Demonstrate the Importance of Spatial Organization in Signal Transduction [My Copy] PLoS ONE, Vol. 4, No. 7. (23 July 2009), e6316. by Michelle N. Costa, Krishnan Radhakrishnan, Bridget S. Wilson, Dionisios G. Vlachos, Jeremy S. Edwards posted to signaling protein-interaction kinetics diffusion by choonpeng on 2009-08-13 06:08:02 as
	Interactions of the Pleckstrin Homology Domain with Phosphatidylinositol Phosphate and Membranes: Characterization via Molecular Dynamics Simulations [My Copy] Biochemistry (15 March 2008) by Emi Psachoulia, Mark S. Sansom posted to coarse-grained signaling by choonpeng on 2008-04-01 09:23:21 as along with 2 people dimka paulschlesinger
	Gating Motions in Voltage-Gated Potassium Channels Revealed by Coarse-Grained Molecular Dynamics Simulations [My Copy] J. Phys. Chem. B, Vol. 112, No. 11. (20 March 2008), pp. 3277-3282. by W. Treptow, S. J. Marrink, M. Tarek posted to coarse-grained signaling by choonpeng on 2008-03-13 05:54:54 as
	Single-molecule detection of structural changes during Per-Arnt-Sim (PAS) domain activation. [My Copy] Proc Natl Acad Sci U S A, Vol. 103, No. 31. (1 August 2006), pp. 11561-11566. by J. M. Zhao, H. Lee, R. A. Nome, S. Majid, N. F. Scherer, W. D. Hoff posted to signaling single-molecule-methods by choonpeng on 2008-02-24 06:19:54 as
	Role of linkers in communication between protein modules [My Copy] Current Opinion in Chemical Biology, Vol. 4, No. 1. (1 February 2000), pp. 22-27. by Rajesh S. Gokhale, Chaitan Khosla posted to modular protein-interaction review signaling by choonpeng on 2008-01-13 12:02:26 as
	Predicting Allosteric Communication in Myosin via a Pathway ofConserved Residues [My Copy] Journal of Molecular Biology, Vol. In Press, Accepted Manuscript by Susan Tang, Jung-Chi Liao, Alexander R. Dunn, Russ B. Altman, James A. Spudich, Jeanette P. Schmidt posted to allostery bioinformatics signaling by choonpeng on 2007-10-30 11:40:13 as along with 5 people and 2 groups barry cactus sobolevnrm jlh64 melting structural_bioinformatics baker-group
	Organization and functions of interacting domains for signaling by protein-protein interactions. [My Copy] Sci STKE, Vol. 2003, No. 209. (18 November 2003) by E. Buck, R. Iyengar posted to protein-interaction signaling by choonpeng on 2007-06-29 05:53:59 as along with 1 person boris_aguilar
	Modular architecture of protein structures and allosteric communications: potential implications for signaling proteins and regulatory linkages [My Copy] Genome biology, Vol. 8, No. 5. (25 May 2007), R92. by Antonio Del-Sol, Marcos J. Arauzo-Bravo, Dolors A. Moya, Ruth Nussinov posted to protein-domains signaling by choonpeng on 2007-06-14 02:55:48 as along with 3 people and 2 groups barry bicko echcram structural_bioinformatics Bioinformatics
	Anatomy of a structural pathway for activation of the catalytic domain of Src kinase Hck [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 67, No. 4. (1 June 2007), pp. 1096-1112. by Nilesh K. Banavali, Benoît Roux posted to allostery signaling by choonpeng on 2007-05-21 07:26:42 as along with 3 people bmduggan allmensch ruvido
	The Signaling Pathway of Rhodopsin [My Copy] Structure, Vol. 15, No. 5. (16 May 2007), pp. 611-623. by Yifei Kong, Martin Karplus posted to signaling by choonpeng on 2007-05-16 09:54:09 as
	Intrinsic disorder as a mechanism to optimize allosteric coupling in proteins [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 20. (15 May 2007), pp. 8311-8315. by Vincent J. Hilser, E. Brad Thompson posted to allostery signaling by choonpeng on 2007-05-16 00:55:20 as along with 6 people and 3 groups guhjy apaydin barry cursonivel1 cactus allmensch structural_bioinformatics Bioinformatics cursonivel1
	Similar binding sites and different partners: implications to shared proteins in cellular pathways. [My Copy] Structure, Vol. 15, No. 3. (March 2007), pp. 341-354. by O. Keskin, R. Nussinov posted to protein-domains signaling by choonpeng on 2007-05-04 17:42:03 as along with 3 people bicko higueruelo marti
	An anti-EGF monoclonal antibody that detects intramolecular communication in factor IX. [My Copy] Biochem Biophys Res Commun, Vol. 286, No. 5. (7 September 2001), pp. 1039-1044. by K. E. Persson, K. E. Knobe, J. Stenflo posted to signaling by choonpeng on 2007-05-04 14:41:57 as
	Transmembrane signalling by a hybrid protein: communication from the domain of chemoreceptor Trg that recognizes sugar-binding proteins to the kinase/phosphatase domain of osmosensor EnvZ. [My Copy] J Bacteriol, Vol. 176, No. 4. (February 1994), pp. 1157-1163. by J. W. Baumgartner, C. Kim, R. E. Brissette, M. Inouye, C. Park, G. L. Hazelbauer posted to signaling by choonpeng on 2007-05-04 13:38:20 as
	The gatekeeper residue controls autoactivation of ERK2 via a pathway of intramolecular connectivity [My Copy] PNAS, Vol. 103, No. 48. (28 November 2006), pp. 18101-18106. by Michelle A. Emrick, Thomas Lee, Paul J. Starkey, Marc C. Mumby, Katheryn A. Resing, Natalie G. Ahn posted to signaling by choonpeng on 2007-05-04 08:49:30 as
	Multivariate Analysis of Conserved Sequence-Structure Relationships in Kinesins: Coupling of the Active Site and a Tubulin-binding Sub-domain [My Copy] Journal of Molecular Biology, Vol. 368, No. 5. (18 May 2007), pp. 1231-1248. by Barry J. Grant, Andrew J. Mccammon, Leo S. Caves, Robert A. Cross posted to signaling by choonpeng on 2007-05-01 13:28:55 as along with 3 people and 2 groups barry cactus insectopalo structural_bioinformatics Bioinformatics
	Collective dynamics of 'small-world' networks. [My Copy] Nature, Vol. 393, No. 6684. (4 June 1998), pp. 440-442. by D. J. Watts, S. H. Strogatz posted to signaling by choonpeng on 2007-04-30 08:24:25 as along with 108 people and 14 groups halukbingol rrbarb dannya222 jsaramak christianholz kentz ptony82 TomHubbard fastjoe23 soramame_0518 jaia normaali leonglester makrehchi makukha fierykylin briordan vtraag dexter_shen AJCann jobadge thegoose2 tomasha apeyrache acrmartins sergiun Kovanen orahcio theus Adso mattjb dpf kaarsinogen cswinburne jmenche chrisdubois tharris MehdiMoussaid jobriath camster G_RAM kewms KAllendoerfer AdrianMiles mague alexisgallagher zqshen shivaram cmmorel Shirakawa tolosoft nithya nygaard balicea dumpa matteodellamico yoh dullhunk voiklis eldaly ianturton merazzle maqbes muraken zono zeroknowledge cerkut xinian mmartin king amac adriandefroment RafG radale jaspervoskuilen timflutre pbrandao sugaya ruvido rsantana cjeans fbaroni michaelmampaey rcrane ransombriggs suizan lpfernandes sbianco kb kaks stefanoallesina beete teferet ladamic iris_2001 livingthingdan jsanpedro jotwin ulmer takeha-e dylanwalker mpotamias jpbarrette Borelli jago ddahlem ilkert tomhebbron eLearning in Leicester Network Data Repository C. elegans / WormBase dbk-lab GraphVis Semantic-Social-Networks microRNA Web2 Soslab CooperationStudies ColDyn contact-id ADMiRes 8_01
	Versatile retargeting of SH3 domain binding by modification of non-conserved loop residues [My Copy] FEBS Letters, Vol. 581, No. 9. (1 May 2007), pp. 1735-1741. by Marita Hiipakka, Kalle Saksela posted to allostery signaling by choonpeng on 2007-04-22 12:17:18 as
	Elucidation of conserved long-range interaction networks in proteins and their significance in determining protein topology [My Copy] Physica A: Statistical Mechanics and its Applications, Vol. 368, No. 2. (15 August 2006), pp. 595-606. by Victoria A. Higman, Lesley H. Greene posted to protein-folding signaling by choonpeng on 2007-04-21 12:47:29 as
	Small-world communication of residues and significance for protein dynamics. [My Copy] Biophys J, Vol. 86, No. 1 Pt 1. (January 2004), pp. 85-91. by A. R. Atilgan, P. Akan, C. Baysal posted to protein-folding signaling by choonpeng on 2007-04-19 03:05:10 as
	Biophysical Characterization of Structural Properties and Folding of Interleukin-1 Receptor Antagonist [My Copy] Journal of Molecular Biology, Vol. 368, No. 4. (11 May 2007), pp. 1187-1201. by Ramil F. Latypov, Timothy S. Harvey, Dingjiang Liu, et al.Pavel V. Bondarenko, Tadahiko Kohno, Fachini, Robert D. Rosenfeld, Randal R. Ketchem, David N. Brems, Andrei A. Raibekas posted to protein-folding signaling by choonpeng on 2007-04-19 02:32:47 as
	The Dynamics of Signal Triggering in a gp130-Receptor Complex [My Copy] Structure, Vol. 15, No. 4. (April 2007), pp. 441-448. by Rishi Matadeen, Wai-Ching Hon, John K. Heath, Yvonne E. Jones, Stephen Fuller posted to nma signaling by choonpeng on 2007-04-19 02:31:54 as
	A new cytokine-receptor binding mode revealed by the crystal structure of the IL-1 receptor with an antagonist. [My Copy] Nature, Vol. 386, No. 6621. (13 March 1997), pp. 194-200. by H. Schreuder, C. Tardif, S. Trump-Kallmeyer, et al.A. Soffientini, E. Sarubbi, A. Akeson, T. Bowlin, S. Yanofsky, R. W. Barrett posted to signaling by choonpeng on 2007-04-12 12:58:24 as along with 2 people timg higueruelo
	Inter-helical Hydrogen Bonds Are Essential Elements for Intra-protein Signal Transduction: The Role of Asp115 in Bacteriorhodopsin Transport Function [My Copy] Journal of Molecular Biology, Vol. 368, No. 3. (4 May 2007), pp. 666-676. by Alex Peralvarez-Marin, Victor A. Lorenz-Fonfria, Jose-Luis Bourdelande, Enric Querol, Hideki Kandori, Esteve Padros posted to signaling by choonpeng on 2007-04-12 11:59:50 as
	Screened non-bonded interactions in native proteins manipulate optimal paths for robust residue communication. [My Copy] Biophys J (9 February 2007) by Ali Rana R. Atilgan, Deniz Turgut, Canan Atilgan posted to signaling by choonpeng on 2007-04-08 13:41:38 as along with 1 person apaydin
	Long-range coupling between separate docking sites in interleukin-1beta. [My Copy] J Mol Biol, Vol. 353, No. 5. (11 November 2005), pp. 1187-1198. by D. K. Heidary, M. Roy, G. O. Daumy, Y. Cong, P. A. Jennings posted to signaling by choonpeng on 2007-04-07 07:35:11 as along with 1 person lna
	Simulating energy flow in biomolecules: application to tuna cytochrome c. [My Copy] Biophys J, Vol. 75, No. 1. (July 1998), pp. 60-69. by Q. Wang, C. F. Wong, H. Rabitz posted to signaling by choonpeng on 2007-04-07 06:03:40 as along with 2 people mkrishna saravan
	The signaling helix: a common functional theme in diverse signaling proteins [My Copy] Biology Direct, Vol. 1, No. 1. (05 September 2006), 25. by Vivek Anantharaman, S. Balaji, L. Aravind posted to modular signaling by choonpeng on 2007-03-27 05:22:45 as along with 1 person robfsouza
	FimX, a multidomain protein connecting environmental signals to twitching motility in Pseudomonas aeruginosa. [My Copy] J Bacteriol, Vol. 185, No. 24. (December 2003), pp. 7068-7076. by B. Huang, C. B. Whitchurch, J. S. Mattick posted to modular signaling by choonpeng on 2007-03-27 04:49:48 as
	Structure of the Redox Sensor Domain of Azotobacter vinelandii NifL at Atomic Resolution: Signaling, Dimerization, and Mechanism, [My Copy] Biochemistry, Vol. 46, No. 12. (27 March 2007), pp. 3614-3623. by J. Key, M. Hefti, E. B. Purcell, K. Moffat posted to allostery signaling by choonpeng on 2007-03-24 07:20:56 as along with 1 person and 2 groups jwm Radiation_Damage Stressosome
	Energy transfer pathways relevant for long-range intramolecular signaling of photosensory protein revealed by microscopic energy conductivity analysis [My Copy] Chemical Physics Letters, Vol. 432, No. 4-6. (11 December 2006), pp. 533-537. by T. Ishikura, T. Yamato posted to signaling by choonpeng on 2007-03-24 06:28:34 as
	Pump-probe molecular dynamics as a tool for studying protein motion and long range coupling [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 65, No. 2. (2006), pp. 347-361. by Kim Sharp, John J. Skinner posted to force-probe-md signaling by choonpeng on 2007-03-24 06:22:37 as along with 3 people and 3 groups barry lna sobolevnrm structural_bioinformatics Bioinformatics baker-group
	Residue centrality, functionally important residues, and active site shape: analysis of enzyme and non-enzyme families. [My Copy] Protein Sci, Vol. 15, No. 9. (September 2006), pp. 2120-2128. by A. Del-Sol, H. Fujihashi, D. Amoros, R. Nussinov posted to signaling by choonpeng on 2007-03-24 06:18:36 as along with 4 people neils bicko drastic massivemayhem
	Ligand-dependent dynamics and intramolecular signaling in a PDZ domain. [My Copy] J Mol Biol, Vol. 335, No. 4. (23 January 2004), pp. 1105-1115. by E. J. Fuentes, C. J. Der, A. L. Lee posted to allostery signaling by choonpeng on 2007-03-19 07:14:56 as along with 2 people and 1 group lna pdelosri EPFL_SB_ITP_LBS
	Intramolecular Signaling Pathways Revealed by Modeling Anisotropic Thermal Diffusion [My Copy] Journal of Molecular Biology, Vol. 351, No. 2. (12 August 2005), pp. 345-354. by Nobuyuki Ota, David A. Agard posted to signaling by choonpeng on 2007-03-19 05:05:49 as along with 3 people and 2 groups barry pansapiens lna structural_bioinformatics Bioinformatics
	Insights into Correlated Motions and Long-Range Interactions in CheY Derived from Molecular Dynamics Simulations. [My Copy] Biophys J, Vol. 92, No. 6. (15 March 2007), pp. 2062-2079. by M. H. Knaggs, F. R. Salsbury, M. H. Edgell, J. S. Fetrow posted to signaling by choonpeng on 2007-03-12 08:27:20 as along with 1 person barry
	Residues crucial for maintaining short paths in network communication mediate signaling in proteins [My Copy] Mol Syst Biol, Vol. 2, No. 1. (2 May 2006), pp. msb4100063-E1-msb4100063-E12. by A. Del-Sol, H. Fujihashi, A. Amoros, R. Nussinov posted to signaling by choonpeng on 2007-02-26 06:32:49 as along with 1 person Retchless
	A study of collective atomic fluctuations and cooperativity in the U1A-RNA complex based on molecular dynamics simulations [My Copy] Journal of Structural Biology, Vol. 157, No. 3. (March 2007), pp. 500-513. by Bethany L. Kormos, Anne M. Baranger, David L. Beveridge posted to cooperativity signaling by choonpeng on 2007-02-12 11:38:22 as
	Dynamic switching mechanisms in LOV1 and LOV2 domains of plant phototropins. [My Copy] Biophys J, Vol. 91, No. 10. (15 November 2006), pp. 3630-3639. by P. L. Freddolino, M. Dittrich, K. Schulten posted to pca protein-interaction signaling by choonpeng on 2006-12-27 11:39:18 as
	The C-Terminal SH3 Domain of CRKL as a Dynamic Dimerization Module Transiently Exposing a Nuclear Export Signal [My Copy] Structure, Vol. 14, No. 12. (December 2006), pp. 1741-1753. by Maria Harkiolaki, Robert J. Gilbert, Jones, Stephan M. Feller posted to signaling protein-domains by choonpeng on 2006-12-20 00:55:10 as
	Ensemble-based signatures of energy propagation in proteins: A new view of an old phenomenon [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 62, No. 3. (2006), pp. 728-738. by Tong Liu, Steven T. Whitten, Vincent J. Hilser posted to signaling by choonpeng on 2006-08-29 07:22:45 as

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protein-folding	177
modular	117
coarse-grained	111
review	90
protein-interaction	87
protein-domains	83
force-probe-md	64
mechanotransduction	63
flagellar	61
methodology	52
protein-translocation	48
single-molecule-methods	48
allostery	45
signaling	42
cell-adhesion	41
high-t-md	40
ttss	29
nma	28
integrin	26
mechanical-unfolding	26
transmembrane	26
solvent-effects	24
protein-mechanics	22
books	21
protein-stability	19
pca	18
chaperone	16
cytoskeletal-dynamics	16
folding-nucleus	16
cooperativity	15
folding-intermediate	15
web-server	15
go-model	14
bioinformatics	13
ensemble	12
implicit-solvent	12
theoretical	11
software	10
self-assembly	9
denatured-state	8
crowding	7
diffusion	7
multi-scale	7
protein-degradation	7
ig-like	6
kinetics	6
computer-programming	5
protein-secretion	5
salt-bridge	5
protein-dynamics	4
structure-validation	3
science-presentation	1
science-writing	1

choonpeng's signaling [42 articles] Export

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