chrisamiller's networks [12 articles] Export

Recent papers added to chrisamiller's library classified by the tag networks. You can also see everyone's networks.

	Why Do Hubs in the Yeast Protein Interaction Network Tend To Be Essential: Reexamining the Connection between the Network Topology and Essentiality [My Copy] PLoS Comput Biol, Vol. 4, No. 8. (1 August 2008), e1000140. by Elena Zotenko, Julian Mestre, Dianne P. O'Leary, Teresa M. Przytycka posted to networks by chrisamiller on 2008-12-20 20:39:15 as along with 12 people and 1 group lawraga marti kaarsinogen jfr aramata jmjimenez srp33 maralena cabbagesofdoom shikin cerca tmmurali GeneGo
	Genome-wide functional synergy between amplified and mutated genes in human breast cancer. [My Copy] Cancer research, Vol. 68, No. 22. (15 November 2008), pp. 9532-9540. by Y. Nikolsky, E. Sviridov, J. Yao, et al.D. Dosymbekov, V. Ustyansky, V. Kaznacheev, Z. Dezso, L. Mulvey, L. E. Macconaill, W. Winckler, T. Serebryiskaya, T. Nikolskaya, K. Polyak posted to acgh breast gaps mutations networks snp by chrisamiller on 2008-12-10 18:14:56 as along with 4 people and 2 groups shikin jfr ipark-kaist Zephyrus GeneGo Breast Cancer Reading Club
	A multidimensional analysis of genes mutated in breast and colorectal cancers [My Copy] Genome Res. (10 August 2007), gr.6431107. by Jimmy Lin, Christine M. Gan, Xiaosong Zhang, et al.Sian Jones, Tobias Sjoblom, Laura D. Wood, Williams D. Parsons, Nickolas Papadopoulos, Kenneth W. Kinzler, Bert Vogelstein, Giovanni Parmigiani, Victor E. Velculescu posted to cancer expression mutations networks by chrisamiller on 2008-09-25 04:45:07 as along with 3 people jfr cerami xingxu
	Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 43. (25 October 2005), pp. 15545-15550. by Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha, et al.Sayan Mukherjee, Benjamin L. Ebert, Michael A. Gillette, Amanda Paulovich, Scott L. Pomeroy, Todd R. Golub, Eric S. Lander, Jill P. Mesirov posted to algorithm expression networks by chrisamiller on 2008-09-25 04:37:30 as along with 46 people and 4 groups Jporci gbloeb miskar giovenko greg dolchan pattersonee mhamidi jperkins zufar ptrobajo antonkratz yaredo tmmurali VGreiff daforerog paszkows ipark-kaist bertelsen ajbattle jessopher askrajiv idonaldson ihpark dragonrez jfr balajis maryee xwbcn hpiwowar aviad_work ealloza jdiggans jeremymiller frohike hawkeyehammer schuylrp natstreet heliopais shikin waghsk roys ellakat srp33 sgoetz AbnerCYH Bioinformatics BioinfoCIPF GeschwindLab Indigene
	GO PaD: the Gene Ontology Partition Database. [My Copy] Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007) by G. Alterovitz, M. Xiang, M. Mohan, M. F. Ramoni posted to go networks by chrisamiller on 2008-08-30 00:53:09 as along with 3 people hollandorange jfr macavity1g
	Microarray data mining: A novel optimization-based approach to uncover biologically coherent structures [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Meng Tan, Erin Smith, James Broach, Christodoulos Floudas posted to algorithm clustering expression go networks by chrisamiller on 2008-06-26 22:43:55 as along with 5 people carlk cswinburne jfr GeeSharpMinor guhjy
	Network-Based Analysis of Affected Biological Processes in Type 2 Diabetes Models [My Copy] PLoS Genet, Vol. 3, No. 6. (15 June 2007), e96. by Manway Liu, Arthur Liberzon, Sek W. Kong, et al.Weil R. Lai, Peter J. Park, Isaac S. Kohane, Simon Kasif posted to algorithm expression networks by chrisamiller on 2008-06-26 21:50:59 as along with 6 people ptrobajo roys tmmurali zwang ajgentles cabbagezs
	Revealing targeted therapy for human cancer by gene module maps. [My Copy] Cancer research, Vol. 68, No. 2. (15 January 2008), pp. 369-378. by D. J. Wong, D. S. Nuyten, A. Regev, et al.M. Lin, A. S. Adler, E. Segal, M. J. van de Vijver, H. Y. Chang posted to cancer expression go networks by chrisamiller on 2008-06-26 21:43:01 as along with 2 people frohike ptrobajo
	Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data. [My Copy] Nature genetics, Vol. 34, No. 2. (11 June 2003), pp. 166-176. by Eran Segal, Michael Shapira, Aviv Regev, et al.Dana Pe'er, David Botstein, Daphne Koller, Nir Friedman posted to expression networks yeast by chrisamiller on 2008-06-26 21:41:00 as along with 26 people and 1 group chasmand stharward bertelsen ipark-kaist VGreiff benjaminsb wangbo ajbattle cswinburne ggallone ealloza orzenil tuck bayesian wnpx tabu koller olympos fishtank dimatura karfunkel roys pkm dragonrez tvdbulck aviad_work Jarman Lab
	Network modeling links breast cancer susceptibility and centrosome dysfunction [My Copy] Nature Genetics, Vol. 39, No. 11. (07 October 2007), pp. 1338-1349. by Miguel A. Pujana, Jing-Dong J. Han, Lea M. Starita, et al.Kristen N. Stevens, Muneesh Tewari, Jin S. Ahn, Gad Rennert, Victor Moreno, Tomas Kirchhoff, Bert Gold, Volker Assmann, Wael M. ElShamy, Jean-Francois Rual, Douglas Levine, Laura S. Rozek, Rebecca S. Gelman, Kristin C. Gunsalus, Roger A. Greenberg, Bijan Sobhian, Nicolas Bertin, Kavitha Venkatesan, Nono Ayivi-Guedehoussou, Xavier Sole, Pilar Hernandez, Conxi Lazaro, Katherine L. Nathanson, Barbara L. Weber, Michael E. Cusick, David E. Hill, Kenneth Offit, David M. Livingston, Stephen B. Gruber, Jeffrey D. Parvin, Marc Vidal posted to algorithm breast cancer expression networks by chrisamiller on 2008-06-26 21:38:59 as along with 11 people and 1 group tonamswish ajbattle jaimie koller jmuhlich jfr ealloza cjeans nedwards jdiezperezj phoenixzxl BioinfoCIPF
	An integrative genomics approach to infer causal associations between gene expression and disease. [My Copy] Nature genetics, Vol. 37, No. 7. (19 July 2005), pp. 710-717. by Eric E. Schadt, John Lamb, Xia Yang, et al.Jun Zhu, Steve Edwards, Debraj Guhathakurta, Solveig K. Sieberts, Stephanie Monks, Marc Reitman, Chunsheng Zhang, Pek Yee Y. Lum, Amy Leonardson, Rolf Thieringer, Joseph M. Metzger, Liming Yang, John Castle, Haoyuan Zhu, Shera F. Kash, Thomas A. Drake, Alan Sachs, Aldons J. Lusis posted to expression networks by chrisamiller on 2008-06-26 21:29:16 as along with 17 people and 1 group mnishimu roys nicholso lawraga ocs pcahan1 tuck brant ckehl koller giovanni lp2 dejori natstreet jo_davies caseybrown mitko GeschwindLab
	Variations in DNA elucidate molecular networks that cause disease. [My Copy] Nature, Vol. 452, No. 7186. (27 March 2008), pp. 429-435. by Yanqing Chen, Jun Zhu, Pek Yee Y. Lum, et al.Xia Yang, Shirly Pinto, Douglas J. MacNeil, Chunsheng Zhang, John Lamb, Stephen Edwards, Solveig K. Sieberts, Amy Leonardson, Lawrence W. Castellini, Susanna Wang, Marie-France F. Champy, Bin Zhang, Valur Emilsson, Sudheer Doss, Anatole Ghazalpour, Steve Horvath, Thomas A. Drake, Aldons J. Lusis, Eric E. Schadt posted to expression networks obesity by chrisamiller on 2008-06-26 21:22:53 as along with 22 people and 2 groups mnishimu Zephyrus biomcgary daforerog roys druvus nicklynch semrich brianb jbsaltz djkt raiyar lp2 jo_davies shikin caseybrown ptrobajo guhjy echinotrix natstreet sanchezbuelna jfr 4th_floor_JC GeneGo

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cancer	34
expression	25
algorithm	18
acgh	16
breast	14
networks	12
clustering	7
r	7
bioinformatics	6
gbm	6
mutations	6
tumors	6
genomics	5
go	5
sequencing	5
snp	5
subtypes	5
bioconductor	4
celllines	4
network	4
structural	4
academia	3
breakpoints	3
career	3
copynumber	3
esp	3
genomic	3
integration	3
assembly	2
browser	2
fusion	2
gaps	2
genome	2
microarray	2
opticalmapping	2
review	2
visualization	2
alignment	1
annotation	1
applications	1
archae	1
arrayexpress	1
bacteria	1
biclusters	1
bioninformatics	1
colorectal	1
database	1
design	1
dwd	1
firestorm	1
function	1
geneset	1
genesignature	1
hapmap	1
industry	1
informationtheory	1
instability	1
interface	1
kegg	1
library	1
linux	1
list	1
mapping	1
meta	1
metagenomic	1
metastasis	1
mirna	1
model	1
mutation	1
nextgen	1
obesity	1
online	1
optimization	1
package	1
paired-end	1
pathway	1
pca	1
platform	1
prediction	1
privacy	1
rae	1
recurrence	1
sequence	1
significance	1
software	1
solid	1
somatic	1
splicing	1
tcga	1
tool	1
tools	1
usability	1
utility	1
variation	1
yeast	1

chrisamiller's networks [12 articles] Export

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