chrn's ch3 [57 articles] Export

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	MetaModel: a program for modelling and control analysis of metabolic pathways on the IBM PC and compatibles. [My Copy] Comput Appl Biosci, Vol. 7, No. 1. (January 1991), pp. 89-93. by A. Cornish-Bowden, J. H. Hofmeyr posted to ch3 refs_ox by chrn on 2007-04-25 09:01:27 as
	Particle-based multidimensional multispecies biofilm model. [My Copy] Appl Environ Microbiol, Vol. 70, No. 5. (May 2004), pp. 3024-3040. by C. Picioreanu, J. U. Kreft, M. C. Van Loosdrecht posted to biofilms ch3 model multispecies refs_ox by chrn on 2007-04-24 22:26:31 as
	Mathematical Biology I [My Copy] (01 January 2002) by J. D. Murray posted to ch3 refs_ox by chrn on 2007-04-19 19:30:22 as along with 5 people Scis0000002 maburkitt vtraag lrsantos Borelli
	Cellular-automata supercomputers for fluid-dynamics modeling. [My Copy] PHYSICAL REVIEW LETTERS, Vol. 56, No. 16. (21 April 1986), pp. 1694-1696. by N. Margolus, T. Toffoli, G. Vichniac posted to automata cellular ch3 dynamics fluid refs_ox by chrn on 2007-04-18 15:05:42 as
	CompuCell, a multi-model framework for simulation of morphogenesis [My Copy] Bioinformatics, Vol. 20, No. 7. (1 May 2004), pp. 1129-1137. by J. A. Izaguirre, R. Chaturvedi, C. Huang, et al.T. Cickovski, J. Coffland, G. Thomas, G. Forgacs, M. Alber, G. Hentschel, S. A. Newman, J. A. Glazier posted to ch3 compucell morphogenesis refs_ox simulation software by chrn on 2007-04-09 22:12:57 as along with 6 people wei singhsh danlea balicea Doug nicholasflann
	A multi-algorithm, multi-timescale method for cell simulation [My Copy] Bioinformatics, Vol. 20, No. 4. (1 March 2004), pp. 538-546. by K. Takahashi, K. Kaizu, B. Hu, M. Tomita posted to cell cellular ch3 refs_ox simulation by chrn on 2007-04-09 19:25:18 as along with 7 people and 3 groups arjunan fierykylin m_j carmaus dagmar lenov csanford dIEMoSIRIS MoSi-Rostock compneur
	Mathematical simulation and analysis of cellular metabolism and regulation. [My Copy] Bioinformatics, Vol. 15, No. 9. (September 1999), pp. 749-758. by I. Goryanin, T. C. Hodgman, E. Selkov posted to cellular ch3 dbsolve metabolism refs_ox regulation simulation software by chrn on 2007-04-09 19:21:12 as along with 1 person and 1 group dagmar compneur
	GEPASI: a software package for modelling the dynamics, steady states and control of biochemical and other systems. [My Copy] Comput Appl Biosci, Vol. 9, No. 5. (October 1993), pp. 563-571. by P. Mendes posted to biochemical ch3 modelling network reactions refs_ox software state steady by chrn on 2007-04-09 19:16:45 as along with 4 people and 4 groups tlse65 beapen cfornari pmendes smac Atopic_and_Seborrhoeic_Dermatitis Skin_Deep Applied_Bimatics
	Multiscale dynamics of biological cells with chemotactic interactions: from a discrete stochastic model to a continuous description. [My Copy] Phys Rev E Stat Nonlin Soft Matter Phys, Vol. 73, No. 5 Pt 1. (May 2006) by M. Alber, N. Chen, T. Glimm, P. M. Lushnikov posted to ch3 chemotaxis fokker-planck interactions refs_ox by chrn on 2007-04-09 12:51:40 as
	STOCHSIM: modelling of stochastic biomolecular processes [My Copy] Bioinformatics, Vol. 17, No. 6. (1 June 2001), pp. 575-576. by Nicolas Le Novere, Thomas S. Shimizu posted to bacterial ch3 chemotaxis intracellular refs_ox by chrn on 2007-04-07 21:18:42 as along with 5 people and 2 groups csanford carmaus mattis23 dagmar lenov dIEMoSIRIS MoSi-Rostock
	Cellular automaton for bacterial towers [My Copy] Physica A: Statistical and Theoretical Physics In Proceedings of the XVIII Max Born Symposium @'Statistical Physics outside Physics@', Vol. 336, No. 1-2. (1 May 2004), pp. 14-26. by J. O. Indekeu, C. V. Giuraniuc posted to automata bacterial biofilms cellular ch3 chemotaxis refs_ox tower by chrn on 2007-04-07 21:16:36 as
	AgentCell: a digital single-cell assay for bacterial chemotaxis [My Copy] Bioinformatics, Vol. 21, No. 11. (1 June 2005), pp. 2714-2721. by Thierry Emonet, Charles M. Macal, Michael J. North, Charles E. Wickersham, Philippe Cluzel posted to automata bacterial cellular ch3 chemotaxis refs_ox by chrn on 2007-04-07 21:15:27 as
	Real-time imaging of fluorescent flagellar filaments. [My Copy] J Bacteriol, Vol. 182, No. 10. (May 2000), pp. 2793-2801. by L. Turner, W. S. Ryu, H. C. Berg posted to ch2 ch3 flagellar refs_ox by chrn on 2007-04-07 20:22:52 as along with 1 person vladimirov
	Design principles of a bacterial signalling network [My Copy] Nature, Vol. 438, No. 7067. (2005), pp. 504-507. by Markus Kollmann, Linda Løvdok, Kilian Bartholomé, Jens Timmer, Victor Sourjik posted to bacterial ch3 network refs_ox signalling by chrn on 2007-04-07 10:58:52 as along with 13 people rklancer abhik monod jmeppley bayesian alexg ryang balicea wnpx balabu entropy comb jjray
	Spatial organization of the bacterial chemotaxis system. [My Copy] Curr Opin Microbiol, Vol. 9, No. 6. (December 2006), pp. 619-624. by D. Kentner, V. Sourjik posted to bacterial ch3 chemotaxis chermoreceptor cluster localisation organisation receptor refs_ox spatial by chrn on 2007-04-07 10:31:48 as along with 2 people vladimirov RebeccaHamer
	Receptor clustering and signal processing in chemotaxis [My Copy] Trends in Microbiology, Vol. 12, No. 12. (December 2004), pp. 569-576. by V. Sourjik posted to ch3 chemoreceptor cluster localisation processing receptor refs_ox signal by chrn on 2007-04-07 10:29:05 as along with 2 people RebeccaHamer nsamways
	Polar location of the chemoreceptor complex in the Escherichia coli cell. [My Copy] Science, Vol. 259, No. 5102. (19 March 1993), pp. 1717-1723. by J. R. Maddock, L. Shapiro posted to ch3 chemoreceptor cluster localisation refs_ox by chrn on 2007-04-07 10:25:24 as
	A model of excitation and adaptation in bacterialâchemotaxis [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 94, No. 14. (8 July 1997), pp. 7263-7268. by P. A. Spiro, J. S. Parkinson, H. G. Othmer posted to ch3 chemotaxis refs_ox by chrn on 2006-01-13 13:53:16 as along with 1 person Dangerfc
	Langevin equation, Fokker-Planck equation and cell migration. [My Copy] Bull Math Biol, Vol. 55, No. 3. (May 1993), pp. 585-608. by M. Schienbein, H. Gruler posted to ch3 fokker-plank langevin refs_ox by chrn on 2006-01-13 12:46:03 as
	The Diffusion Limit of Transport Equations II: Chemotaxis Equations [My Copy] SIAM J. Appl. Math., Vol. 62 (2002), pp. 1222-1250. by H. G. Othmer, T. Hillen posted to ch3 refs_ox by chrn on 2006-01-13 12:43:02 as
	Diffusion and ecological problems: Mathematical models (Biomathematics ; v. 10) [My Copy] (1980) by A. Okubo posted to ch3 diffusion mathbio_textbook refs_ox by chrn on 2006-01-13 12:38:00 as
	Hydrodynamics of bacterial colonies: phase diagrams. [My Copy] Chaos, Vol. 14, No. 3. (September 2004), pp. 562-570. by J. Lega, T. Passot posted to bacterial ch3 colony hydrodynamics refs_ox by chrn on 2006-01-13 12:16:25 as along with 1 person perpetuale
	Hydrodynamics of bacterial colonies: a model. [My Copy] Phys Rev E Stat Nonlin Soft Matter Phys, Vol. 67, No. 3 Pt 1. (March 2003) by J. Lega, T. Passot posted to bacterial ch3 colony hydrodynamics refs_ox by chrn on 2006-01-13 12:16:05 as along with 1 person sergiun
	BacSim, a simulator for individual-based modelling of bacterial colony growth. [My Copy] Microbiology, Vol. 144 ( Pt 12) (December 1998), pp. 3275-3287. by J. U. Kreft, G. Booth, J. W. Wimpenny posted to bacterial ch3 colony individual-based refs_ox by chrn on 2006-01-13 12:13:57 as along with 2 people nsamways perpetuale
	Mathematical aspects of bacterial chemotaxis. [My Copy] Antibiot Chemother, Vol. 19 (1974), pp. 79-93. by E. F. Keller posted to ch3 chemotaxis refs_ox by chrn on 2006-01-13 11:43:08 as
	Computational model for cell migration in three-dimensional matrices. [My Copy] Biophys J, Vol. 89, No. 2. (August 2005), pp. 1389-1397. by M. H. Zaman, R. D. Kamm, P. Matsudaira, D. A. Lauffenburger posted to 3d ch3 refs_ox by chrn on 2006-01-13 01:47:43 as along with 1 person mathen
	Temporal comparisons in bacterial chemotaxis. [My Copy] Proc Natl Acad Sci U S A, Vol. 83, No. 23. (December 1986), pp. 8987-8991. by J. E. Segall, S. M. Block, H. C. Berg posted to ch3 chemotaxis refs_ox by chrn on 2006-01-12 00:33:13 as
	Experimental Investigation on the Validity of Population Dynamics Approach to Bacterial Colony Formation [My Copy] J. Phys. Soc. Jpn., Vol. 63 (1994), pp. 1205-1211. by J. Wakita, K. Komatsu, A. Nakahara, T. Matsuyama, M. Matsushita posted to ch3 colony refs_ox by chrn on 2005-12-31 13:47:55 as
	Random Walks in Biology [My Copy] (07 September 1993) by Howard C. Berg posted to ch3 random refs_ox walk by chrn on 2005-12-31 03:05:09 as along with 1 person gabe_rosser
	Levy flight search patterns of wandering albatrosses [My Copy] Nature, Vol. 381, No. 6581. (30 May 1996), pp. 413-415. by G. M. Viswanathan, V. Afanasyev, S. V. Buldyrev, E. J. Murphy, P. A. Prince, H. E. Stanley posted to ch3 levy_walk refs_ox by chrn on 2005-12-31 02:57:02 as along with 3 people wentang skumagai david_parsons
	Swimming behavior and chemosensory responses in the protistan microzooplankton as a function of the hydrodynamic regime [My Copy] Bull. Mar. Sci., Vol. 43 (1988), pp. 768-773. by M. Levandowsky, J. Klafter, B. S. White posted to ch3 levy_walk refs_ox by chrn on 2005-12-31 02:52:49 as
	Bacterial self-organization: co-enhancement of complexification and adaptability in a dynamic environment. [My Copy] Philos Transact A Math Phys Eng Sci, Vol. 361, No. 1807. (15 June 2003), pp. 1283-1312. by E. Ben-Jacob posted to ch3 cooperative refs_ox by chrn on 2005-12-30 23:44:51 as along with 1 person and 2 groups mattjb ComplexAdaptiveSystems DSTO-CAS
	Generic modelling of cooperative growth patterns in bacterial colonies. [My Copy] Nature. , Vol. 368, No. 6466. (3 March 1994), pp. 46-49. by E. Ben-Jacob, O. Schochet, A. Tenenbaum, I. Cohen, A. Czirók, T. Vicsek posted to ch3 cooperative refs_ox by chrn on 2005-12-30 23:44:19 as along with 2 people sergiun MehdiMoussaid
	Individual based simulations of bacterial growth on agar plates [My Copy] Physica A, Vol. 305, No. 3. (15 March 2002), pp. 604-618. by M. Ginovart, D. Lopez, J. Valls, M. Silbert posted to ch3 ibm refs_ox by chrn on 2005-12-30 22:13:31 as
	An integrodifferential model for orientational distributions of F-actin in cells [My Copy] SIAM J. Appl. Math., Vol. 59, No. 3. (June 1999), pp. 787-809. by Edith Geigant, Karina Ladizhansky, Alexander Mogilner posted to ch3 refs_ox by chrn on 2005-12-30 22:10:36 as
	Cellular automata approaches to biological modeling. [My Copy] J Theor Biol, Vol. 160, No. 1. (7 January 1993), pp. 97-133. by G. B. Ermentrout, L. Edelstein-Keshet posted to ca ch3 refs_ox by chrn on 2005-12-29 14:14:35 as along with 1 person ozzy11111
	Selecting a common direction. II. Peak-like solutions representing total alignment of cell clusters. [My Copy] J Math Biol, Vol. 34, No. 8. (1996), pp. 811-842. by A. Mogilner, L. Edelstein-Keshet, G. B. Ermentrout posted to ch3 refs_ox by chrn on 2005-12-29 13:20:30 as
	Modelling run-and-tumble chemotaxis in a shear flow. [My Copy] Bull Math Biol, Vol. 62, No. 4. (July 2000), pp. 775-791. by R. N. Bearon, T. J. Pedley posted to ch3 refs_ox by chrn on 2005-12-29 13:07:43 as
	Mathematical models and simulations of bacterial growth and chemotaxis in a diffusion gradient chamber. [My Copy] J Math Biol, Vol. 42, No. 2. (February 2001), pp. 120-144. by C. Chiu, F. C. Hoppensteadt posted to ch3 refs_ox by chrn on 2005-12-29 13:04:00 as
	Model and analysis of chemotactic bacterial patterns in a liquid medium. [My Copy] J Math Biol, Vol. 38, No. 4. (April 1999), pp. 359-375. by R. Tyson, S. R. Lubkin, J. D. Murray posted to ch3 refs_ox by chrn on 2005-12-29 13:03:35 as
	Modeling alignment and movement of animals and cells. [My Copy] J Math Biol, Vol. 45, No. 3. (September 2002), pp. 234-260. by F. Lutscher posted to ch3 refs_ox by chrn on 2005-12-29 12:51:49 as
	Travelling fronts for correlated random walks [My Copy] Canadian Applied Math. Quart., Vol. 2 (1994), pp. 27-43. by K. P. Hadeler posted to ch3 refs_ox by chrn on 2005-12-29 12:49:57 as
	Models of dispersal in biological systems. [My Copy] J Math Biol, Vol. 26, No. 3. (1988), pp. 263-298. by H. G. Othmer, S. R. Dunbar, W. Alt posted to ch3 refs_ox by chrn on 2005-12-29 12:45:28 as
	Reaction Transport Systems in Biological Modelling [My Copy] In Mathematics inspired by biology, Lect. Notes on Biomath., No. 1714. (1999), pp. 95-150. by K. P. Hadeler edited by V. Capasso, O. Diekmann posted to ch3 refs_ox by chrn on 2005-12-29 12:29:13 as
	The derivation of chemotaxis equations as limit dynamics of moderately interacting stochastic many-particle system [My Copy] SIAM J. Appl. Math., Vol. 61 (2000), pp. 183-212. by A. Stevens posted to ch3 refs_ox by chrn on 2005-12-29 12:01:50 as
	A system of reaction diffusion equations arising in the theory of reinforced random walks [My Copy] SIAM J. Appl. Math., Vol. 57, No. 3. (June 1997), pp. 683-730. by H. A. Levine, B. D. Sleeman posted to ch3 refs_ox by chrn on 2005-12-29 11:57:23 as
	Global Existence for a Parabolic Chemotaxis Model with Prevention of Overcrowding [My Copy] Advances in Applied Mathematics, Vol. 26, No. 4. (May 2001), pp. 280-301. by T. Hillen, K. Painter posted to ch3 refs_ox by chrn on 2005-12-29 11:53:55 as
	Aggregation, blowup, and collapse: the abc's of taxis in reinforced random walks [My Copy] SIAM J. Appl. Math., Vol. 57, No. 4. (August 1997), pp. 1044-1081. by H. G. Othmer, A. Stevens posted to ch3 refs_ox by chrn on 2005-12-29 11:50:20 as
	Model for chemotaxis. [My Copy] J Theor Biol, Vol. 30, No. 2. (February 1971), pp. 225-234. by E. F. Keller, L. A. Segel posted to ch3 refs_ox by chrn on 2005-12-29 11:44:01 as
	Initiation of slime mold aggregation viewed as an instability. [My Copy] J Theor Biol, Vol. 26, No. 3. (March 1970), pp. 399-415. by E. F. Keller, L. A. Segel posted to ch3 refs_ox by chrn on 2005-12-29 11:42:31 as along with 1 person balabu

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refs_ox	236
chemotaxis	65
ch3	57
refs_snps	36
th_ibg	30
bacteria	24
ch2	23
bacterial	22
catalytic_sites	21
flagellar	20
motor	20
dna-protein	18
refs_catalytic	18
pattern	16
rhodobacter	16
sphaeroides	15
ch1	13
software	13
colony	12
taxis	12
dna-binding	11
snps	11
membrane	9
transcription	9
dna	8
levy_walk	8
protein	8
svm	8
biofilms	7
cell	7
evolution	7
pathway	7
simulation	7
site-specific_evolutionary_models	7
formation	6
hormones	6
prediction	6
receptor	6
refs_mp	6
adaptation	5
cellular	5
cluster	5
factor	5
machine-learning	5
pattern_formation	5
phototaxis	5
protein-dna	5
receptors	5
brain	4
chemoreceptor	4
classifier	4
databases	4
functional_sites	4
individual-based	4
protein_structure	4
random_walk	4
signal	4
signalling	4
toread	4
automata	3
bayesian	3
chemoreceptors	3
classification	3
cognition	3
cooperative	3
flagella	3
galvanotaxis	3
genome	3
lcsh	3
localisation	3
method	3
model	3
network	3
phylogenetic	3
random	3
reaction-diffusion	3
review	3
rhodobacter_sphaeroides	3
software_snps	3
transduction	3
virtual	3
3d	2
all-atom	2
binding	2
biochemical	2
biology	2
cellular_automata	2
chey	2
clustering	2
clusters	2
coli	2
communication	2
complex	2
cytoplasmic	2
data	2
database	2
docking	2
dynamics	2
e-cell	2
elasticity	2
energy	2
escherichia	2
estrogen	2
factors	2
flagellar_motor	2
fokker-planck	2
free	2
helix-turn-helix	2
hmm	2
hpv	2
hydrodynamics	2
ibm	2
in	2
kernels	2
langevin	2
language	2
magnetotaxis	2
memory	2
muscle	2
mutation	2
neural	2
neurophysiology	2
nucleation	2
pdb	2
processes	2
sensitivity	2
sequence-specific	2
snps_refs	2
structure	2
system_biology	2
testosteron	2
thermotaxis	2
transmembrane	2
walk	2
acid	1
agar	1
agents	1
aging	1
airtaxis	1
amino	1
antidote	1
autocorrelation	1
biased	1
biological_motion	1
brownian	1
ca	1
cancer	1
catalytic	1
cath	1
cell-chemotaxis	1
ch10	1
ch4	1
ch5	1
channel	1
charcoal	1
chemical	1
chemokinesis	1
chermoreceptor	1
chimp	1
compucell	1
consurf	1
csa	1
dbsolve	1
dependent	1
detection	1
diel	1
diffusion	1
dipeptides	1
dna-dendrimer	1
electronic	1
emotions	1
endocrine	1
entropy	1
episodic	1
estradiol	1
evaluation	1
evolutionary	1
excitation	1
expectation_maximisation	1
extraction	1
finkelstein	1
flagella_motor	1
flim	1
fluid	1
fokker-plank	1
fractaion	1
fractal	1
frequency	1
g	1
genomics	1
genotype	1
geobacter	1
gmres	1
g-protein_coupled_receptors	1
gradient	1
gravitaxis	1
growth	1
hole	1
homology	1
homstrad	1
hypothalamic	1
immune	1
incongruence	1
index	1
information	1
intelligence	1
interactions	1
interaction_sites	1
intracellular	1
japanese	1
joy	1
jump	1
kanji	1
kinesis	1
kinetics	1
least_squares	1
linguistic	1
locomotion	1
mathbio_textbook	1
maths	1
max_likelihood	1
meliloti	1
metabolism	1
migration	1
milk	1
mining	1
modelling	1
morphogenesis	1
morphotype	1
motif	1
mrbayes	1
multispecies	1
nanonpore	1
networks	1
neural_nets	1
neurolinguistics	1
non-specific	1
nootropic	1
nuclear	1
omim	1
organisation	1
osmotaxis	1
paml	1
papillomavirus	1
pathways	1
ph	1
pharmacokinetic	1
phosphorylation	1
phototaxs	1
phyml	1
poetry	1
polymorphisms	1
population	1
pore	1
power	1
power-law	1
process	1
processing	1
profile-based	1
proliferation	1
prostate	1
protein_folding	1
protein_function	1
proteins	1
protein_struction	1
proton	1
pupko	1
queries	1
query	1
radiation	1
ramp-support	1
reactions	1
recombination	1
refs_peptides	1
regulation	1
reproduction	1
residues	1
response	1
ritual	1
roc	1
rosetta	1
route-learning	1
scop	1
search	1
seasonal	1
self-engineering	1
self-ortanisation	1
self-wiring	1
sequence_structure	1
shannon	1
sift	1
silico	1
sinorhizobium	1
sites	1
site-specific	1
sleep	1
social	1
space	1
spatial	1
spatio	1
spectrum	1
speed	1
sperm	1
state	1
steady	1
step	1
stochastic	1
string	1
swiss-prot	1
system	1
systems	1
tanycytes	1
tar	1
temporal	1
terminated	1
thermophilic	1
tocheck	1
torque	1
tower	1
tracking	1
transfer	1
translocation	1
transport	1
transportdb	1
tumour	1
tunneling	1
two-state	1
ultraviolet	1
unzipping	1
useful	1
velocity	1
viji	1
vm	1
wag	1
web	1
weibull	1
word	1
zipf	1

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