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cjeans's coiled-coil [57 articles]

Recent papers added to cjeans's library classified by the tag coiled-coil. You can also see everyone's coiled-coil.
  • Signal processing by its coil zipper domain activates IKKgamma
    Proceedings of the National Academy of Sciences (23 January 2008), 0706552105.
    by Stuart Bloor, Grigory Ryzhakov, Sebastian Wagner, Butler, David L Smith, Rebekka Krumbach, Ivan Dikic, Felix Randow
    posted to coiled-coil by cjeans on 2008-01-24 06:52:48 as **
  • Preferred side-chain constellations at antiparallel coiled-coil interfaces
    Proceedings of the National Academy of Sciences (9 January 2008), 0709068105.
    by Erik B Hadley, Oliver D Testa, Derek N Woolfson, Samuel H Gellman
    posted to coiled-coil design structure by cjeans on 2008-01-10 09:42:03 as ** along with 1 person chdnw
  • Long coiled-coil proteins and membrane traffic
    Biochimica et Biophysica Acta (BBA) - Molecular Cell Research, Vol. 1641, No. 2-3. (18 August 2003), pp. 71-85.
    by Alison K Gillingham, Sean Munro
    posted to coiled-coil membrane-traffic by cjeans on 2007-12-20 07:02:23 as **
  • How kinesin waits between steps
    Nature (14 November 2007)
    by Teppei Mori, Ronald D Vale, Michio Tomishige
    posted to coiled-coil by cjeans on 2007-12-20 01:21:47 as ** along with 1 person cactus
  • Core Residue Replacements Cause Coiled-Coil Orientation Switching in Vitro and in Vivo: Structure-Function Correlations for Osmosensory Transporter ProP.
    Biochemistry (13 December 2007)
    by Yonit Tsatskis, Stanley C Kwok, Elisabeth Becker, Chad Gill, Michelle N Smith, Robert A Keates, Robert S Hodges, Janet M Wood
    posted to coiled-coil by cjeans on 2007-12-18 11:59:16 as ** along with 1 person chgjb
  • Reconstruction of ancestral protein interaction networks for the bZIP transcription factors
    Proceedings of the National Academy of Sciences (12 December 2007), 0706339104.
    by John W Pinney, Grigoris D Amoutzias, Magnus Rattray, David L Robertson
    posted to bzip coiled-coil network pin tfbs by cjeans on 2007-12-13 08:12:52 as ** along with 4 people tmmurali grahamc Pao-Yang hplatero
  • Tropomyosin's Periods Are Quasi-Equivalent for Actin Binding but Have Specific Regulatory Functions.
    Biochemistry (4 December 2007)
    by Abhishek Singh, Sarah E Hitchcock-Degregori
    posted to coiled-coil by cjeans on 2007-12-10 07:51:31 as **
  • Conformational Specificity of the Lac Repressor Coiled-Coil Tetramerization Domain(,).
    Biochemistry (4 December 2007)
    by Jie Liu, Qi Zheng, Yiqun Deng, Qunnu Li, Neville R Kallenbach, Min Lu
    posted to coiled-coil by cjeans on 2007-12-10 07:50:35 as **
  • Monomeric myosin V uses two binding regions for the assembly of stable translocation complexes.
    Proc Natl Acad Sci U S A (4 December 2007)
    by Alexander Heuck, Tung-Gia G Du, Stephan Jellbauer, Klaus Richter, Claudia Kruse, Sigrun Jaklin, Marisa Müller, Johannes Buchner, Ralf-Peter P Jansen, Dierk Niessing
    posted to coiled-coil by cjeans on 2007-12-10 07:50:09 as **
  • Structure of phage P22 cell envelope–penetrating needle
    Nature Structural & Molecular Biology, Vol. 14, No. 12. (02 December 2007), pp. 1221-1226.
    by Adam S Olia, Sherwood Casjens, Gino Cingolani
    posted to coiled-coil by cjeans on 2007-12-10 07:49:47 as **
  • Calcium and cargoes as regulators of myosin 5 activity.
    Biochem Biophys Res Commun (28 November 2007)
    by James R R Sellers, Kavitha Thirumurugan, Takeshi Sakamoto, John A A Hammer, Peter J J Knight
    posted to coiled-coil by cjeans on 2007-12-10 07:47:50 as **
  • Binding of influenza A virus NS1 protein to the inter-SH2 domain of p85beta suggests a novel mechanism for PI3K activation.
    J Biol Chem (20 November 2007)
    by Benjamin G G Hale, Ian H H Batty, C Peter P Downes, Richard E E Randall
    posted to coiled-coil by cjeans on 2007-11-24 00:18:52 as **
  • The structure of the coiled-coil domain of ndel1 and the basis of its interaction with lis1, the causal protein of miller-dieker lissencephaly.
    Structure, Vol. 15, No. 11. (November 2007), pp. 1467-1481.
    by U Derewenda, C Tarricone, WC Choi, DR Cooper, S Lukasik, F Perrina, A Tripathy, MH Kim, DS Cafiso, A Musacchio, ZS Derewenda
    posted to experiment coiled-coil by cjeans on 2007-11-15 06:15:19 as **
  • An HMM model for coiled-coil domains and a comparison with PSSM-based predictions.
    Bioinformatics, Vol. 18, No. 4. (April 2002), pp. 617-625.
    by M Delorenzi, T Speed
    posted to coiled-coil by cjeans on 2007-10-17 11:26:18 as ** along with 3 people hansen gwenknight ca3295
  • Comparative analysis of coiled-coil prediction methods.
    J Struct Biol, Vol. 155, No. 2. (August 2006), pp. 140-145.
    by M Gruber, J Söding, AN Lupas
    posted to coiled-coil by cjeans on 2007-10-17 11:16:13 as ** along with 2 people ca3295 marck
  • Electrostatic Contributions to the Stability of the GCN4 Leucine Zipper Structure
    Journal of Molecular Biology, Vol. In Press, Accepted Manuscript
    by William M Matousek, Barbara Ciani, Carolyn A Fitch, Bertrand E Garcia-Moreno, Richard A Kammerer, Andrei T Alexandrescu
    posted to coiled-coil by cjeans on 2007-10-11 10:00:05 as ** along with 1 person and 1 group sobolevnrm baker-group
  • The binding dynamics of tropomyosin on actin.
    Biophys J, Vol. 81, No. 6. (December 2001), pp. 3146-3155.
    by A Vilfan
    posted to coiled-coil tropomyosin by cjeans on 2007-06-27 11:00:27 as **
  • Coiled coil structures and transcription: an analysis of the S. cerevisiae coilome.
    Mol Genet Genomics (3 May 2007)
    by Kellie E Barbara, Kristine A Willis, Terry M Haley, Stephen J Deminoff, George M Santangelo
    posted to coiled-coil transcription by cjeans on 2007-06-21 15:58:00 as ***** along with 1 person chgjb
  • Cross-species annotation of basic leucine zipper factor interactions: Insight into the evolution of closed interaction networks.
    Mol Biol Evol, Vol. 23, No. 8. (August 2006), pp. 1480-1492.
    by CD Deppmann, RS Alvania, EJ Taparowsky
    posted to bzip coiled-coil evolution by cjeans on 2007-06-19 08:28:23 as ** along with 2 people hplatero gwenknight
  • The bZip transcription factor Cgap1p is involved in multidrug resistance and required for activation of multidrug transporter gene CgFLR1 in Candida glabrata.
    Gene, Vol. 386, No. 1-2. (15 January 2007), pp. 63-72.
    by KH Chen, T Miyazaki, HF Tsai, JE Bennett
    posted to bzip coiled-coil sample by cjeans on 2007-06-19 07:55:00 as **
  • Role of the C-terminal domains of rice bZIP proteins RF2a and RF2b in regulating transcription.
    Biochem J (20 March 2007)
    by Yi Liu, Shunhong Dai, Roger N Beachy
    posted to bzip coiled-coil transcription by cjeans on 2007-06-18 14:04:43 as **
  • Atypical bZIP Domain of Viral Transcription Factor Contributes to Stability of Dimer Formation and Transcriptional Function.
    J Virol, Vol. 81, No. 13. (July 2007), pp. 7149-7155.
    by C Schelcher, S Al Mehairi, E Verrall, Q Hope, K Flower, B Bromley, DN Woolfson, MJ West, AJ Sinclair
    posted to bzip coiled-coil virus by cjeans on 2007-06-18 14:04:06 as ** along with 1 person bethbromley
  • The G-box: a ubiquitous regulatory DNA element in plants bound by the GBF family of bZIP proteins.
    Trends Biochem Sci, Vol. 20, No. 12. (December 1995), pp. 506-510.
    by AE Menkens, U Schindler, AR Cashmore
    posted to bzip coiled-coil plant by cjeans on 2007-06-18 10:36:52 as **
  • Accessory factor-bZIP-DNA interactions.
    Curr Opin Chem Biol, Vol. 2, No. 1. (February 1998), pp. 18-23.
    by AM Baranger
    posted to bzip coiled-coil by cjeans on 2007-06-18 10:36:17 as **
  • Plant bZIP G-box binding factors. Modular structure and activation mechanisms.
    Eur J Biochem, Vol. 268, No. 22. (November 2001), pp. 5655-5666.
    by Y Sibéril, P Doireau, P Gantet
    posted to bzip coiled-coil plant by cjeans on 2007-06-18 10:35:37 as **
  • bZIP transcription factors in Arabidopsis.
    Trends Plant Sci, Vol. 7, No. 3. (March 2002), pp. 106-111.
    by M Jakoby, B Weisshaar, W Dröge-Laser, J Vicente-Carbajosa, J Tiedemann, T Kroj, F Parcy,
    posted to bzip coiled-coil by cjeans on 2007-06-18 10:33:51 as **
  • Classification of human B-ZIP proteins based on dimerization properties.
    Mol Cell Biol, Vol. 22, No. 18. (September 2002), pp. 6321-6335.
    by C Vinson, M Myakishev, A Acharya, AA Mir, JR Moll, M Bonovich
    posted to bzip coiled-coil interaction by cjeans on 2007-06-18 10:33:22 as **** along with 1 person gwenknight
  • E4BP4/NFIL3, a PAR-related bZIP factor with many roles.
    Bioessays, Vol. 24, No. 11. (November 2002), pp. 1023-1029.
    by IG Cowell
    posted to bzip coiled-coil sample by cjeans on 2007-06-18 10:32:48 as *** along with 1 person and 1 group tharris C. elegans / WormBase
  • bZIP proteins of human gammaherpesviruses.
    J Gen Virol, Vol. 84, No. Pt 8. (August 2003), pp. 1941-1949.
    by AJ Sinclair
    posted to bzip coiled-coil interaction transcription virus by cjeans on 2007-06-18 10:30:55 as **** along with 2 people hplatero gwenknight
  • Deciphering B-ZIP transcription factor interactions in vitro and in vivo.
    Biochim Biophys Acta, Vol. 1759, No. 1-2. (b 2006), pp. 4-12.
    by C Vinson, A Acharya, EJ Taparowsky
    posted to bzip coiled-coil interaction by cjeans on 2007-06-18 10:25:17 as ** along with 2 people gwenknight chgjb
  • One billion years of bZIP transcription factor evolution: conservation and change in dimerization and DNA-binding site specificity.
    Mol Biol Evol, Vol. 24, No. 3. (March 2007), pp. 827-835.
    by GD Amoutzias, AS Veron, J Weiner, M Robinson-Rechavi, E Bornberg-Bauer, SG Oliver, DL Robertson
    posted to bzip coiled-coil evolution transcription by cjeans on 2007-06-18 10:24:41 as ****
  • bZIPDB : A database of regulatory information for human bZIP transcription factors
    BMC Genomics, Vol. 8 (30 May 2007), 136.
    by Taewoo Ryu, Juhyun Jung, Sunjae Lee, Ho J Nam, Sun W Hong, Jae W Yoo, Dong-Ki Lee, Doheon Lee
    posted to bzip coiled-coil dataset by cjeans on 2007-06-18 10:22:39 as ** along with 1 person hplatero
  • Clustering of large hydrophobes in the hydrophobic core of two-stranded alpha-helical coiled-coils controls protein folding and stability.
    J Biol Chem, Vol. 278, No. 37. (12 September 2003), pp. 35248-35254.
    by SC Kwok, RS Hodges
    posted to coiled-coil interaction interface by cjeans on 2007-06-18 08:09:58 as ****
  • The structure of alpha-helical coiled coils.
    Adv Protein Chem, Vol. 70 (2005), pp. 37-78.
    by AN Lupas, M Gruber
    posted to coiled-coil structure by cjeans on 2007-06-18 08:09:21 as **
  • Coiled coils: a highly versatile protein folding motif
    Trends in Cell Biology, Vol. 11, No. 2. (1 February 2001), pp. 82-88.
    by Peter Burkhard, Jorg Stetefeld, Sergei V Strelkov
    posted to coiled-coil structure by cjeans on 2007-06-18 08:04:41 as ***
  • Construction of an atomic model for tropomyosin and implications for interactions with actin
    Journal of Molecular Biology, Vol. 192, No. 1. (5 November 1986), pp. 128-131.
    by George N Phillips
    posted to coiled-coil sample tropomyosin by cjeans on 2007-06-18 02:35:05 as ****
  • Dynamics and folding of single two-stranded coiled-coil peptides studied by fluorescent energy transfer confocal microscopy.
    Proc Natl Acad Sci U S A, Vol. 97, No. 24. (21 November 2000), pp. 13021-13026.
    by DS Talaga, WL Lau, H Roder, J Tang, Y Jia, WF DeGrado, RM Hochstrasser
    posted to coiled-coil interaction interface by cjeans on 2007-06-16 13:03:44 as **
  • The coiled-coil trigger site of the rod domain of cortexillin I unveils a distinct network of interhelical and intrahelical salt bridges.
    Structure, Vol. 8, No. 3. (15 March 2000), pp. 223-230.
    by P Burkhard, RA Kammerer, MO Steinmetz, GP Bourenkov, U Aebi
    posted to coiled-coil sample by cjeans on 2007-06-16 13:03:06 as **
  • Reconstitution of the KRAB-KAP-1 repressor complex: a model system for defining the molecular anatomy of RING-B box-coiled-coil domain-mediated protein-protein interactions.
    J Mol Biol, Vol. 295, No. 5. (4 February 2000), pp. 1139-1162.
    by H Peng, GE Begg, DC Schultz, JR Friedman, DE Jensen, DW Speicher, FJ Rauscher
    posted to coiled-coil sample by cjeans on 2007-06-16 13:02:46 as **
  • Long coiled-coil proteins and membrane traffic.
    Biochim Biophys Acta, Vol. 1641, No. 2-3. (18 August 2003), pp. 71-85.
    by AK Gillingham, S Munro
    posted to coiled-coil sample by cjeans on 2007-06-16 10:52:40 as **
  • FYVE and coiled-coil domains determine the specific localisation of Hrs to early endosomes.
    J Cell Sci, Vol. 114, No. Pt 12. (June 2001), pp. 2255-2263.
    by C Raiborg, B Bremnes, A Mehlum, DJ Gillooly, A D'Arrigo, E Stang, H Stenmark
    posted to coiled-coil sample by cjeans on 2007-06-16 10:51:46 as **
  • CoCoA, a nuclear receptor coactivator which acts through an N-terminal activation domain of p160 coactivators.
    Mol Cell, Vol. 12, No. 6. (December 2003), pp. 1537-1549.
    by JH Kim, H Li, MR Stallcup
    posted to coiled-coil sample by cjeans on 2007-06-16 10:51:19 as **
  • Bacteriophage P22 Tail Accessory Factor GP26 Is a Long Triple-stranded Coiled-coil
    J. Biol. Chem., Vol. 280, No. 7. (18 February 2005), pp. 5929-5933.
    by Dewan Andrews, James S Butler, Jawdat Al-Bassam, Lisa Joss, Danella A Winn-Stapley, Sherwood Casjens, Gino Cingolani
    posted to coiled-coil sample by cjeans on 2007-06-15 10:59:34 as *
  • A leucine zipper stabilizes the pentameric membrane domain of phospholamban and forms a coiled-coil pore structure.
    J Biol Chem, Vol. 271, No. 10. (8 March 1996), pp. 5941-5946.
    by HK Simmerman, YM Kobayashi, JM Autry, LR Jones
    posted to coiled-coil interaction interface by cjeans on 2007-06-15 05:08:11 as ****
  • Effects of side-chain characteristics on stability and oligomerization state of a de novo-designed model coiled-coil: 20 amino acid substitutions in position "d".
    J Mol Biol, Vol. 300, No. 2. (7 July 2000), pp. 377-402.
    by B Tripet, K Wagschal, P Lavigne, CT Mant, RS Hodges
    posted to coiled-coil interaction interface by cjeans on 2007-06-15 05:07:40 as **** along with 2 people ca3295 hplatero
  • Role of the N-terminal activation domain of the coiled-coil coactivator in mediating transcriptional activation by beta-catenin.
    Mol Endocrinol, Vol. 20, No. 12. (December 2006), pp. 3251-3262.
    by CK Yang, JH Kim, MR Stallcup
    posted to coiled-coil sample by cjeans on 2007-06-15 02:28:56 as **
  • Differential use of functional domains by coiled-coil coactivator in its synergistic coactivator function with beta-catenin or GRIP1.
    J Biol Chem, Vol. 281, No. 6. (10 February 2006), pp. 3389-3397.
    by CK Yang, JH Kim, H Li, MR Stallcup
    posted to coiled-coil sample by cjeans on 2007-06-15 02:07:54 as ****
  • Predicting specificity in bZIP coiled-coil protein interactions.
    Genome Biol, Vol. 5, No. 2. (2004)
    by JH Fong, AE Keating, M Singh
    posted to bzip coiled-coil interaction by cjeans on 2007-06-15 01:20:11 as **** along with 3 people hplatero gwenknight chgjb
  • Structure-based prediction of bZIP partnering specificity.
    J Mol Biol, Vol. 355, No. 5. (3 February 2006), pp. 1125-1142.
    by G Grigoryan, AE Keating
    posted to bzip coiled-coil interaction interface prediction structure by cjeans on 2007-06-15 01:19:33 as **** along with 4 people hplatero gwenknight chgjb ca3295
  • The retroviral oncoprotein Tax targets the coiled-coil centrosomal protein TAX1BP2 to induce centrosome overduplication
    Nature Cell Biology, Vol. 8, No. 7. (11 June 2006), pp. 717-724.
    by Yick-Pang Ching, Shing-Fai Chan, Kuan-Teh Jeang, Dong-Yan Jin
    posted to coiled-coil human sample by cjeans on 2007-06-14 11:17:09 as read
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