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	Designed Protein-Protein Association [My Copy] Science, Vol. 319, No. 5860. (11 January 2008), pp. 206-209. by Dirk Grueninger, Nora Treiber, Mathias O. Ziegler, Jochen W. Koetter, Monika-Sarah Schulze, Georg E. Schulz posted to design interface ppi by cjeans on 2008-01-23 06:48:23 as along with 6 people and 1 group timg zwang cactus biomcgary sobolevnrm higueruelo baker-group
	Micromechanical properties of keratin intermediate filament networks [My Copy] Proceedings of the National Academy of Sciences (16 January 2008), 0710728105. by Sivaraj Sivaramakrishnan, James V. Degiulio, Laszlo Lorand, Robert D. Goldman, Karen M. Ridge posted to experiment network ppi by cjeans on 2008-01-17 09:48:40 as
	The evolutionary dynamics of the Saccharomyces cerevisiae protein interaction network after duplication [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 3. (22 January 2008), pp. 950-954. by Aviva Presser, Michael B. Elowitz, Manolis Kellis, Roy Kishony posted to duplication evolution module network pin ppi by cjeans on 2008-01-17 08:39:26 as along with 10 people carlk ellarond saket leemond31 robfsouza loukialili pradiptaray zwang roys phoenixzxl
	High-confidence prediction of global interactomes based on genome-wide coevolutionary networks. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 3. (22 January 2008), pp. 934-939. by David Juan, Florencio Pazos, Alfonso Valencia posted to coevolution evolution mirrortree pin ppi profile by cjeans on 2008-01-17 08:07:50 as along with 18 people and 1 group dfdong ptrobajo biomcgary qluo winterschlaefer marti tmmurali brant balicea sebastien_vigneau bluto aconesa Katje roys friendpine huali mdstobbe paolomarcatili microbiology_nijmegen
	Where have all the interactions gone? Estimating the coverage of two-hybrid protein interaction maps. [My Copy] PLoS computational biology, Vol. 3, No. 11. (1 November 2007), e214. by Hailiang Huang, Bruno M. Jedynak, Joel S. Bader posted to network pin ppi by cjeans on 2008-01-11 06:05:30 as along with 4 people guhjy chad_davis zwang Ema
	Protein-protein interaction networks and biology--what's the connection? [My Copy] Nature biotechnology, Vol. 26, No. 1. (January 2008), pp. 69-72. by Luke Hakes, John W. Pinney, David L. Robertson, Simon C. Lovell posted to network ppi by cjeans on 2008-01-09 13:26:39 as along with 19 people and 1 group ptrobajo colmryan lawraga flbarroso Yanno guhjy tmmurali jfr balicea dullhunk neils mikaelhuss nedwards biehl shikin mclarenv Yumyai paolomarcatili zdai GeneGo
	Multiple knockout analysis of genetic robustness in the yeast metabolic network [My Copy] Nature Genetics, Vol. 38, No. 9. (29 August 2006), pp. 993-998. by David Deutscher, Isaac Meilijson, Martin Kupiec, Eytan Ruppin posted to genetics phenotype pin ppi by cjeans on 2007-12-30 03:02:22 as along with 9 people and 1 group shung nzm tmmurali koller raiyar patrycja_missiuro edwardmorrissey hryk jiny steinmetzlab
	Gene essentiality and the topology of protein interaction networks [My Copy] posted to network phenotype pin ppi by cjeans on 2007-12-30 02:58:55 as
	A Single Determinant Dominates the Rate of Yeast Protein Evolution [My Copy] Mol Biol Evol, Vol. 23, No. 2. (1 February 2006), pp. 327-337. by D. Allan Drummond, Alpan Raval, Claus O. Wilke posted to evolution pin ppi by cjeans on 2007-12-25 12:34:18 as along with 2 people and 1 group daveGerrard robfsouza BergmanLab
	The origin of protein interactions and allostery in colocalization. [My Copy] Nature, Vol. 450, No. 7172. (13 December 2007), pp. 983-990. by John Kuriyan, David Eisenberg posted to ppi protein structure by cjeans on 2007-12-18 13:40:36 as along with 7 people and 1 group mittinatten yanjiang ynaito sobolevnrm mingzhi phoenixzxl higueruelo baker-group
	Reaching for high-hanging fruit in drug discovery at protein–protein interfaces [My Copy] Nature, Vol. 450, No. 7172. (12 December 2007), pp. 1001-1009. by James A. Wells, Christopher L. Mcclendon posted to interface ppi protein proteome by cjeans on 2007-12-18 13:37:05 as along with 8 people semin allmensch ramensky chgjb phoenixzxl higueruelo bicko guhjy
	Molecular Principles of the Interactions of Disordered Proteins [My Copy] Journal of Molecular Biology, Vol. 372, No. 2. (14 September 2007), pp. 549-561. by Balint Meszaros, Peter Tompa, Istvan Simon, Zsuzsanna Dosztanyi posted to interaction ppi by cjeans on 2007-12-18 12:04:42 as along with 3 people guhjy higueruelo allmensch
	A skeleton of the human protein interactome. [My Copy] Cell, Vol. 122, No. 6. (23 September 2005), pp. 830-832. by A. Ghavidel, G. Cagney, A. Emili posted to human interaction pin ppi by cjeans on 2007-12-12 13:29:16 as along with 2 people eukfn Evangelia
	A systematic interaction map of validated kinase inhibitors with Ser/Thr kinases. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 51. (18 December 2007), pp. 20523-20528. by Oleg Fedorov, Brian Marsden, Vanda Pogacic, et al.Peter Rellos, Susanne Müller, Alex N. Bullock, Juerg Schwaller, Michael Sundström, Stefan Knapp posted to pin ppi by cjeans on 2007-12-12 10:25:20 as along with 4 people pauldobson tmmurali renatomilani guhjy
	Global landscape of protein complexes in the yeast Saccharomyces cerevisiae [My Copy] Nature, Vol. 440, No. 7084. (22 March 2006), pp. 637-643. by Nevan J. Krogan, Gerard Cagney, Haiyuan Yu, et al.Gouqing Zhong, Xinghua Guo, Alexandr Ignatchenko, Joyce Li, Shuye Pu, Nira Datta, Aaron P. Tikuisis, Thanuja Punna, JosÃ© M. PeregrÃn-Alvarez, Michael Shales, Xin Zhang, Michael Davey, Mark D. Robinson, Alberto Paccanaro, James E. Bray, Anthony Sheung, Bryan Beattie, Dawn P. Richards, Veronica Canadien, Atanas Lalev, Frank Mena, Peter Wong, Andrei Starostine, Myra M. Canete, James Vlasblom, Samuel Wu, Chris Orsi, Sean R. Collins, Shamanta Chandran, Robin Haw, Jennifer J. Rilstone, Kiran Gandi, Natalie J. Thompson, Gabe Musso, Peter St Onge, Shaun Ghanny, Mandy H. Y. Lam, Gareth Butland, Amin M. Altaf-Ul, Shigehiko Kanaya, Ali Shilatifard, Erin O'Shea, Jonathan S. Weissman, C. James Ingles, Timothy R. Hughes, John Parkinson, Mark Gerstein, Shoshana J. Wodak, Andrew Emili, Jack F. Greenblatt posted to network pin ppi by cjeans on 2007-12-11 01:24:23 as along with 30 people and 5 groups aceol mpotamias paccanarolab ajbattle mgomes jxl bicko cerca jiny Borelli lfriedl chad_davis balajis marcius tardigrade nirfriedman balabu j3xucite nickluscombe koller raiyar nicoleq Evangelia csaveanu frohike carlk hplatero chasmand mapplab ethkim Paccanaro Lab kdl EBI-regulation BioinfoCIPF SGU-CIPF
	Analysis of the human protein interactome and comparison with yeast, worm and fly interaction datasets [My Copy] Nature Genetics, Vol. 38, No. 3. (24 February 2006), pp. 285-293. by T. K. B. Gandhi, Jun Zhong, Suresh Mathivanan, et al.L. Karthick, K. N. Chandrika, Sujatha S. Mohan, Salil Sharma, Stefan Pinkert, Shilpa Nagaraju, Balamurugan Periaswamy, Goparani Mishra, Kannabiran Nandakumar, Beiyi Shen, Nandan Deshpande, Rashmi Nayak, Malabika Sarker, Jef D. Boeke, Giovanni Parmigiani, Jörg Schultz, Joel S. Bader, Akhilesh Pandey posted to evolution pin ppi by cjeans on 2007-12-10 10:24:26 as along with 14 people and 2 groups semin yyby aprildh31 balajis indigoviolet tny spavey TheresaNiederberger alwinpremanand dejori Pao-Yang pmendes carlk cerca EisenLab FAB-lab
	The Modular Organization of Domain Structures: Insights into Protein–Protein Binding [My Copy] PLoS Computational Biology, Vol. 3, No. 12. (1 December 2007), e239. by Del, Pablo Carbonell posted to domain ppi structure by cjeans on 2007-12-08 06:40:10 as along with 9 people bicko chad_davis choonpeng grahamc zwang niallhaslam biehl marti carlk
	Localizing frustration in native proteins and protein assemblies [My Copy] Proceedings of the National Academy of Sciences (5 December 2007), 0709915104. by Diego U. Ferreiro, Joseph A. Hegler, Elizabeth A. Komives, Peter G. Wolynes posted to interface ppi structure by cjeans on 2007-12-06 23:43:25 as along with 2 people and 1 group cactus sobolevnrm baker-group
	Deciphering Protein–Protein Interactions. Part I. Experimental Techniques and Databases [My Copy] PLoS Computational Biology, Vol. 3, No. 3. (1 March 2007), e42. by Benjamin A. Shoemaker, Anna R. Panchenko posted to ppi by cjeans on 2007-12-03 03:55:59 as along with 8 people guhjy aalibes bicko jfr chad_davis iris_2001 lpfernandes groepl
	Deciphering protein-protein interactions. Part II. Computational methods to predict protein and domain interaction partners. [My Copy] PLoS computational biology, Vol. 3, No. 4. (27 April 2007), e43. by Benjamin A. Shoemaker, Anna R. Panchenko posted to ppi by cjeans on 2007-12-03 03:55:51 as along with 26 people dfdong aceol colmryan timg cerca jperkins chica kiekyon kshameer zdai Robinder giovenko Yanno guhjy aalibes bicko jfr chad_davis iris_2001 zwang lpfernandes groepl carlk Evangelia higueruelo phoenixzxl
	Protein-protein interaction: a genetic selection for compensating mutations at the barnase-barstar interface. [My Copy] Proc Natl Acad Sci U S A, Vol. 93, No. 6. (19 March 1996), pp. 2343-2347. by M. Jucovic, R. W. Hartley posted to interface ppi by cjeans on 2007-12-02 11:50:46 as along with 2 people flbarroso ras
	Soft protein-protein docking in internal coordinates. [My Copy] Protein Sci, Vol. 11, No. 2. (February 2002), pp. 280-291. by J. Fernández-Recio, M. Totrov, R. Abagyan posted to docking ppi by cjeans on 2007-11-30 07:12:54 as along with 5 people and 2 groups barry bicko bluvsh1 selrac wilbur structural_bioinformatics Bioinformatics
	Protein-protein interfaces: Analysis of amino acid conservation in homodimers [My Copy] Proteins: Structure, Function, and Genetics, Vol. 42, No. 1. (2001), pp. 108-124. by William S. J. Valdar, Janet M. Thornton posted to interface ppi by cjeans on 2007-11-30 07:08:34 as
	Studies of protein-protein interfaces: A statistical analysis of the hydrophobic effect -- TSAI et al. 6 (1): 53 -- Protein Science [My Copy] posted to interface ppi by cjeans on 2007-11-30 07:06:21 as
	Improved prediction of protein-protein binding sites using a support vector machines approach [My Copy] Bioinformatics, Vol. 21, No. 8. (15 April 2005), pp. 1487-1494. by James R. Bradford, David R. Westhead posted to interface ppi by cjeans on 2007-11-30 06:55:07 as along with 8 people bicko sriram_s chaleil ameetsoni Evangelia phoenixzxl marti kevinemamy
	Topological structure analysis of the protein-protein interaction network in budding yeast [My Copy] Nucl. Acids Res., Vol. 31, No. 9. (1 May 2003), pp. 2443-2450. by Dongbo Bu, Yi Zhao, Lun Cai, et al.Hong Xue, Xiaopeng Zhu, Hongchao Lu, Jingfen Zhang, Shiwei Sun, Lunjiang Ling, Nan Zhang, Guojie Li, Runsheng Chen posted to network ppi topology by cjeans on 2007-11-30 06:52:35 as along with 6 people and 1 group jmenche lfriedl iris_2001 carlk minostro ellakat kdl
	Conserved network motifs allow protein-protein interaction prediction [My Copy] Bioinformatics, Vol. 20, No. 18. (12 December 2004), pp. 3346-3352. by Istvan Albert, Reka Albert posted to motif network ppi by cjeans on 2007-11-30 06:49:23 as along with 4 people nurban jperkins Evangelia iris_2001
	POINT: a database for the prediction of protein-protein interactions based on the orthologous interactome [My Copy] Bioinformatics, Vol. 20, No. 17. (22 November 2004), pp. 3273-3276. by Tao-Wei Huang, An-Chi Tien, Wen-Shien Huang, et al.Yuan-Chii G. Lee, Chin-Lin Peng, Huei-Hun Tseng, Cheng-Yan Kao, Chi-Ying F. Huang posted to evolution ortholog ppi by cjeans on 2007-11-30 06:47:59 as along with 1 person cerca
	Interaction generality, a measurement to assess the reliability of a protein-protein interaction [My Copy] Nucl. Acids Res., Vol. 30, No. 5. (1 March 2002), pp. 1163-1168. by Rintaro Saito, Harukazu Suzuki, Yoshihide Hayashizaki posted to assessment ppi by cjeans on 2007-11-30 01:18:52 as along with 4 people and 1 group lfriedl bluto iris_2001 ethkim kdl
	Prediction of potential protein-protein interaction sites from amino acid sequence : Identification of a fibrin polymerization site [My Copy] FEBS Letters, Vol. 385, No. 1-2. (29 April 1996), pp. 81-86. by Manjunatha R. Kini, Herbert J. Evans posted to ppi sequence by cjeans on 2007-11-30 01:17:49 as
	Development of unified statistical potentials describing protein-protein interactions. [My Copy] Biophys J, Vol. 84, No. 3. (March 2003), pp. 1895-1901. by H. Lu, L. Lu, J. Skolnick posted to docking ppi by cjeans on 2007-11-30 01:17:07 as along with 8 people kaarsinogen bicko mdimmic chad_davis selrac iris_2001 wilbur kgutwin
	Protein docking using a genetic algorithm [My Copy] Proteins: Structure, Function, and Genetics, Vol. 44, No. 1. (8 May 2001), pp. 44-56. by Eleanor J. Gardiner, Peter Willett, Peter J. Artymiuk posted to docking ppi by cjeans on 2007-11-30 01:14:57 as along with 5 people and 1 group dgruiz rmj001 bicko yongzhao timgeppert TSRI_MGL
	Evolutionary predictions of binding surfaces and interactions [My Copy] Current Opinion in Structural Biology, Vol. 12, No. 1. (1 February 2002), pp. 21-27. by Olivier Lichtarge, Mathew E. Sowa posted to evolution interface ppi by cjeans on 2007-11-30 01:14:28 as along with 1 person Pao-Yang
	Predicting protein-protein interactions using signature products [My Copy] Bioinformatics, Vol. 21, No. 2. (15 January 2005), pp. 218-226. by Shawn Martin, Diana Roe, Jean-Loup Faulon posted to integrative ppi by cjeans on 2007-11-30 01:09:08 as along with 4 people pablocarb mdimmic ziquje carlk
	Information assessment on predicting protein-protein interactions. [My Copy] BMC Bioinformatics, Vol. 5 (18 October 2004) by N. Lin, B. Wu, R. Jansen, M. Gerstein, H. Zhao posted to integrative ppi by cjeans on 2007-11-30 01:07:01 as along with 5 people and 2 groups okarsligil lfriedl wnpx eukfn iris_2001 kdl Bioinformatics
	Prediction of protein-protein interactions based on surface patch comparison [My Copy] PROTEOMICS, Vol. 4, No. 6. (2004), pp. 1727-1736. by Oliviero Carugo, Giacomo Franzot posted to interface ppi by cjeans on 2007-11-30 01:06:26 as along with 2 people qluo Evangelia
	A Continuum Model for Protein-Protein Interactions: Application to the Docking Problem [My Copy] Journal of Molecular Biology, Vol. 250, No. 2. (7 July 1995), pp. 258-275. by Richard M. Jackson, Michael J. Sternberg posted to docking ppi by cjeans on 2007-11-30 01:05:54 as along with 1 person and 1 group sobolevnrm baker-group
	Identification of Protein-Protein Interaction Sites from Docking Energy Landscapes [My Copy] Journal of Molecular Biology, Vol. 335, No. 3. (16 January 2004), pp. 843-865. by Juan Fernandez-Recio, Maxim Totrov, Ruben Abagyan posted to docking interface ppi by cjeans on 2007-11-30 01:04:49 as along with 2 people HawkinsJohnC bicko
	Prediction of protein-protein interactions by combining structure and sequence conservation in protein interfaces [My Copy] Bioinformatics, Vol. 21, No. 12. (15 June 2005), pp. 2850-2855. by A. Selim Aytuna, Attila Gursoy, Ozlem Keskin posted to interface ppi by cjeans on 2007-11-30 01:03:13 as along with 4 people selrac higueruelo bicko kgutwin
	Electrostatic aspects of protein–protein interactions [My Copy] Current Opinion in Structural Biology, Vol. 10, No. 2. (1 April 2000), pp. 153-159. by F. Sheinerman posted to interface ppi by cjeans on 2007-11-30 01:01:54 as along with 4 people flbarroso charris5 carlescorbi mikaellund
	A simple physical model for binding energy hot spots in proteinâprotein complexes [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 22. (29 October 2002), pp. 14116-14121. by Tanja Kortemme, David Baker posted to interaction interface ppi structure by cjeans on 2007-11-30 01:00:01 as along with 8 people and 1 group chemrahul82 onufriev oceanwind lna jwm bicko hmk skoddet Nielsen group
	Analysis of protein-protein interaction sites using surface patches. [My Copy] Journal of molecular biology, Vol. 272, No. 1. (12 September 1997), pp. 121-132. by S. Jones, J. M. Thornton posted to interface ppi by cjeans on 2007-11-30 00:59:18 as along with 3 people mgomes joseolucha chad_davis
	Protein interaction networks from yeast to human. [My Copy] Current opinion in structural biology, Vol. 14, No. 3. (June 2004), pp. 292-299. by Peer Bork, Lars J. Jensen, Christian von Mering, Arun K. Ramani, Insuk Lee, Edward M. Marcotte posted to evolution pin ppi by cjeans on 2007-11-30 00:58:27 as along with 9 people aelef jiny kuhn koller grahamc lpfernandes selrac Evangelia larsjuhljensen
	Relating whole-genome expression data with protein-protein interactions. [My Copy] Genome Res, Vol. 12, No. 1. (January 2002), pp. 37-46. by R. Jansen, D. Greenbaum, M. Gerstein posted to expression ppi by cjeans on 2007-11-29 10:05:58 as along with 10 people saket Robinder gurkanbebek gespim grahamc iris_2001 kintoki paolomarcatili nedwards carlk
	Automated structure-based prediction of functional sites in proteins: applications to assessing the validity of inheriting protein function from homology in genome annotation and to protein docking. [My Copy] J Mol Biol, Vol. 311, No. 2. (10 August 2001), pp. 395-408. by P. Aloy, E. Querol, F. X. Aviles, M. J. Sternberg posted to function ppi residues by cjeans on 2007-11-29 10:03:43 as along with 6 people ramiro2k kaarsinogen chrn bicko chad_davis sriram_s
	Gaining confidence in high-throughput protein interaction networks. [My Copy] Nature biotechnology, Vol. 22, No. 1. (January 2004), pp. 78-85. by Joel S. Bader, Amitabha Chaudhuri, Jonathan M. Rothberg, John Chant posted to ppi by cjeans on 2007-11-29 10:00:47 as along with 17 people and 1 group aceol carlk chica anf dakelley lawraga wenhui ocs dragonrez lfriedl gurkanbebek raiyar iris_2001 patrycjam patrycja_missiuro Evangelia ellakat kdl
	Multimeric threading-based prediction of protein-protein interactions on a genomic scale: application to the Saccharomyces cerevisiae proteome. [My Copy] Genome Res, Vol. 13, No. 6A. (June 2003), pp. 1146-1154. by L. Lu, A. K. Arakaki, H. Lu, J. Skolnick posted to ppi structure by cjeans on 2007-11-29 09:50:22 as along with 5 people and 1 group bicko mdimmic lfriedl chad_davis ruvido kdl
	Distinguishing structural and functional restraints in evolution in order to identify interaction sites. [My Copy] J Mol Biol, Vol. 342, No. 5. (1 October 2004), pp. 1487-1504. by V. Chelliah, L. Chen, T. L. Blundell, S. C. Lovell posted to interface ppi by cjeans on 2007-11-29 09:49:35 as along with 8 people and 1 group chrn bicko rabio massivemayhem cat_worth MaggieYe medic0747 zwang structural_bioinformatics
	An assessment of the uses of homologous interactions [My Copy] Bioinformatics, Vol. 24, No. 5. (1 March 2008), pp. 689-695. by Ramazan Saeed, Charlotte Deane posted to dataset ppi by cjeans on 2007-11-29 08:51:21 as along with 11 people snow_dragon carlk lawraga winterschlaefer chad_davis grahamc laughcry mingzhi cdeane Pao-Yang samesense
	Determination of protein function, evolution and interactions by structural genomics [My Copy] Current Opinion in Structural Biology, Vol. 11, No. 3. (1 June 2001), pp. 354-363. by Sarah A. Teichmann, Alexey G. Murzin, Cyrus Chothia posted to evolution genome ppi structure by cjeans on 2007-11-28 09:47:51 as along with 1 person ramiro2k

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cjeans's ppi [115 articles] Export Sort

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